RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 A0A087WTM6 91 aa6.27□□□□□ -1.41
NPLOC4-219ENST00000576713 A0A087WX48 190 aa6.27□□□□□ -1.41
NPLOC4-219ENST00000576713 A0A1B0GW15 77 aa6.27□□□□□ -1.41
NPLOC4-219ENST00000576713 NPYP01303 97 aa6.27□□□□□ -1.41
NPLOC4-219ENST00000576713 COTL1Q14019 142 aa6.27□□□□□ -1.41
NPLOC4-219ENST00000576713 LAGE3Q14657 143 aa6.27□□□□□ -1.41
NPLOC4-219ENST00000576713 ATP5L2Q7Z4Y8 100 aa6.27□□□□□ -1.41
NPLOC4-219ENST00000576713 TMEM243Q9BU79 118 aa6.27□□□□□ -1.41
NPLOC4-219ENST00000576713 ST20Q9HBF5 79 aa6.27□□□□□ -1.41
NPLOC4-219ENST00000576713 TRBV27A0A0K0K1C4 114 aa6.26□□□□□ -1.41
NPLOC4-219ENST00000576713 ESDP10768 282 aa6.26□□□□□ -1.41
NPLOC4-219ENST00000576713 AMTP48728 403 aa6.26□□□□□ -1.41
NPLOC4-219ENST00000576713 TMEM97Q5BJF2 176 aa6.26□□□□□ -1.41
NPLOC4-219ENST00000576713 KRTAP26-1Q6PEX3 210 aa6.26□□□□□ -1.41
NPLOC4-219ENST00000576713 TMEM136Q6ZRR5 245 aa6.26□□□□□ -1.41
NPLOC4-219ENST00000576713 UBE2WQ96B02 151 aa6.26□□□□□ -1.41
NPLOC4-219ENST00000576713 BTF3L4Q96K17 158 aa6.26□□□□□ -1.41
NPLOC4-219ENST00000576713 CTDSP1Q9GZU7 261 aa6.26□□□□□ -1.41
NPLOC4-219ENST00000576713 URGCP-MRPS24S4R325 110 aa6.26□□□□□ -1.41
NPLOC4-219ENST00000576713 TRBV24-1A0A075B6N3 115 aa6.25□□□□□ -1.41
NPLOC4-219ENST00000576713 I3L3M4 83 aa6.25□□□□□ -1.41
NPLOC4-219ENST00000576713 LECT2O14960 151 aa6.25□□□□□ -1.41
NPLOC4-219ENST00000576713 APOC3P02656 99 aa6.25□□□□□ -1.41
NPLOC4-219ENST00000576713 ANGP03950 147 aaKnown RBP6.25□□□□□ -1.41
NPLOC4-219ENST00000576713 PMCHP20382 165 aa6.25□□□□□ -1.41
NPLOC4-219ENST00000576713 CKS2P33552 79 aa6.25□□□□□ -1.41
NPLOC4-219ENST00000576713 KCNIP4Q6PIL6 250 aa6.25□□□□□ -1.41
NPLOC4-219ENST00000576713 SPATA12Q7Z6I5 190 aa6.25□□□□□ -1.41
NPLOC4-219ENST00000576713 NFE4Q86UQ8 179 aa6.25□□□□□ -1.41
NPLOC4-219ENST00000576713 LINC00269Q8N2A0 174 aa6.25□□□□□ -1.41
NPLOC4-219ENST00000576713 IMMP2LQ96T52 175 aa6.25□□□□□ -1.41
NPLOC4-219ENST00000576713 RPS10P5Q9NQ39 176 aa6.25□□□□□ -1.41
NPLOC4-219ENST00000576713 PRR34Q9NV39 138 aa6.25□□□□□ -1.41
NPLOC4-219ENST00000576713 APCSP02743 223 aa6.24□□□□□ -1.41
NPLOC4-219ENST00000576713 RHEBQ15382 184 aa6.24□□□□□ -1.41
NPLOC4-219ENST00000576713 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.24□□□□□ -1.41
NPLOC4-219ENST00000576713 KRTAP17-1Q9BYP8 105 aa6.24□□□□□ -1.41
NPLOC4-219ENST00000576713 IGKV2D-24A0A075B6R9 120 aa6.23□□□□□ -1.41
NPLOC4-219ENST00000576713 TRAV8-3A0A0A6YYJ7 113 aa6.23□□□□□ -1.41
NPLOC4-219ENST00000576713 TGIF2-C20orf24A0A0A6YYL0 155 aa6.23□□□□□ -1.41
NPLOC4-219ENST00000576713 A0A1B0GUV1 79 aa6.23□□□□□ -1.41
NPLOC4-219ENST00000576713 S100A8P05109 93 aa6.23□□□□□ -1.41
NPLOC4-219ENST00000576713 KIAA1644Q3SXP7 199 aa6.23□□□□□ -1.41
NPLOC4-219ENST00000576713 BAALCQ8WXS3 180 aa6.23□□□□□ -1.41
NPLOC4-219ENST00000576713 FAM104AQ969W3 186 aa6.23□□□□□ -1.41
NPLOC4-219ENST00000576713 PRELID3AQ96N28 172 aa6.23□□□□□ -1.41
NPLOC4-219ENST00000576713 YPEL4Q96NS1 127 aa6.23□□□□□ -1.41
NPLOC4-219ENST00000576713 IGLV10-54A0A075B6I4 117 aa6.22□□□□□ -1.41
NPLOC4-219ENST00000576713 VCYO14598 125 aa6.22□□□□□ -1.41
NPLOC4-219ENST00000576713 TCAPO15273 167 aa6.22□□□□□ -1.41
NPLOC4-219ENST00000576713 FGF6P10767 208 aa6.22□□□□□ -1.41
NPLOC4-219ENST00000576713 ORMDL3Q8N138 153 aa6.22□□□□□ -1.41
NPLOC4-219ENST00000576713 C20orf78Q9BR46 151 aa6.22□□□□□ -1.41
NPLOC4-219ENST00000576713 SMIM2Q9BVW6 85 aa6.22□□□□□ -1.41
NPLOC4-219ENST00000576713 KRTAP4-5Q9BYR2 181 aa6.22□□□□□ -1.41
NPLOC4-219ENST00000576713 ABCA13Q86UQ4 5058 aa6.21□□□□□ -1.41
NPLOC4-219ENST00000576713 LOC389332A0A1B0GUA5 103 aa6.21□□□□□ -1.42
NPLOC4-219ENST00000576713 UBE2L6O14933 153 aa6.21□□□□□ -1.42
NPLOC4-219ENST00000576713 PSCAO43653 123 aa6.21□□□□□ -1.42
NPLOC4-219ENST00000576713 RPL39P62891 51 aaKnown RBP6.21□□□□□ -1.42
NPLOC4-219ENST00000576713 RPL32P62910 135 aaKnown RBP6.21□□□□□ -1.42
NPLOC4-219ENST00000576713 REG3AQ06141 175 aa6.21□□□□□ -1.42
NPLOC4-219ENST00000576713 ELOBQ15370 118 aa6.21□□□□□ -1.42
NPLOC4-219ENST00000576713 TRAV9-1A0A075B6T8 112 aa6.2□□□□□ -1.42
NPLOC4-219ENST00000576713 C16orf90A8MZG2 172 aa6.2□□□□□ -1.42
NPLOC4-219ENST00000576713 CRPP02741 224 aa6.2□□□□□ -1.42
NPLOC4-219ENST00000576713 PPBPP02775 128 aa6.2□□□□□ -1.42
NPLOC4-219ENST00000576713 RNASE13Q5GAN3 156 aaKnown RBP6.2□□□□□ -1.42
NPLOC4-219ENST00000576713 RNASEKQ6P5S7 137 aaKnown RBP6.2□□□□□ -1.42
NPLOC4-219ENST00000576713 SVBPQ8N300 66 aa6.2□□□□□ -1.42
NPLOC4-219ENST00000576713 Q8N814 137 aa6.2□□□□□ -1.42
NPLOC4-219ENST00000576713 UBE2D4Q9Y2X8 147 aa6.2□□□□□ -1.42
NPLOC4-219ENST00000576713 IGKV3OR2-268A0A0C4DH90 116 aa6.19□□□□□ -1.42
NPLOC4-219ENST00000576713 PRSS47A8MTI9 375 aa6.19□□□□□ -1.42
NPLOC4-219ENST00000576713 PHOX2AO14813 284 aa6.19□□□□□ -1.42
NPLOC4-219ENST00000576713 SNAPINO95295 136 aa6.19□□□□□ -1.42
NPLOC4-219ENST00000576713 PPP1R17O96001 155 aa6.19□□□□□ -1.42
NPLOC4-219ENST00000576713 HLA-DQA1P01909 254 aa6.19□□□□□ -1.42
NPLOC4-219ENST00000576713 S100PP25815 95 aa6.19□□□□□ -1.42
NPLOC4-219ENST00000576713 FCER1GP30273 86 aa6.19□□□□□ -1.42
NPLOC4-219ENST00000576713 KRTAP10-1P60331 282 aa6.19□□□□□ -1.42
NPLOC4-219ENST00000576713 PKIAP61925 76 aa6.19□□□□□ -1.42
NPLOC4-219ENST00000576713 Q0VG73 95 aa6.19□□□□□ -1.42
NPLOC4-219ENST00000576713 MIAQ16674 131 aa6.19□□□□□ -1.42
NPLOC4-219ENST00000576713 MRPL52Q86TS9 123 aaKnown RBP6.19□□□□□ -1.42
NPLOC4-219ENST00000576713 CBLN2Q8IUK8 224 aa6.19□□□□□ -1.42
NPLOC4-219ENST00000576713 OPRPNQ99935 248 aaPredicted RBP6.19□□□□□ -1.42
NPLOC4-219ENST00000576713 GNB1LQ9BYB4 327 aa6.19□□□□□ -1.42
NPLOC4-219ENST00000576713 CDC42SE2Q9NRR3 84 aa6.19□□□□□ -1.42
NPLOC4-219ENST00000576713 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.18□□□□□ -1.42
NPLOC4-219ENST00000576713 H7C423 109 aa6.18□□□□□ -1.42
NPLOC4-219ENST00000576713 LINC01620Q4KN68 170 aa6.18□□□□□ -1.42
NPLOC4-219ENST00000576713 AMMECR1LQ6DCA0 310 aa6.18□□□□□ -1.42
NPLOC4-219ENST00000576713 Q6ZUT4 128 aa6.18□□□□□ -1.42
NPLOC4-219ENST00000576713 KIR2DL4Q99706 377 aa6.18□□□□□ -1.42
NPLOC4-219ENST00000576713 ALKBH7Q9BT30 221 aaPredicted RBP6.18□□□□□ -1.42
NPLOC4-219ENST00000576713 USP17L23D6RBM5 183 aa6.17□□□□□ -1.42
NPLOC4-219ENST00000576713 ZNF25P17030 456 aaPredicted RBP6.17□□□□□ -1.42
NPLOC4-219ENST00000576713 IFI27P40305 119 aaPredicted RBP6.17□□□□□ -1.42
NPLOC4-219ENST00000576713 Q8N8P6 123 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms