RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 COX11Q9Y6N1 276 aa9.73□□□□□ -0.85
NPLOC4-209ENST00000572760 PRSS29PA6NIE9 313 aa9.72□□□□□ -0.85
NPLOC4-209ENST00000572760 LINC00614P0C842 121 aa9.72□□□□□ -0.85
NPLOC4-209ENST00000572760 BAGE3Q86Y29 109 aa9.72□□□□□ -0.85
NPLOC4-209ENST00000572760 ZNF664Q8N3J9 261 aa9.72□□□□□ -0.85
NPLOC4-209ENST00000572760 CDC42SE2Q9NRR3 84 aa9.72□□□□□ -0.85
NPLOC4-209ENST00000572760 PRR34Q9NV39 138 aa9.72□□□□□ -0.85
NPLOC4-209ENST00000572760 CSDC2Q9Y534 153 aaKnown RBP9.72□□□□□ -0.85
NPLOC4-209ENST00000572760 TRAV8-4A0A0B4J246 113 aa9.71□□□□□ -0.86
NPLOC4-209ENST00000572760 RYR2Q92736 4967 aa9.71□□□□□ -0.86
NPLOC4-209ENST00000572760 IGLV10-54A0A075B6I4 117 aa9.7□□□□□ -0.86
NPLOC4-209ENST00000572760 LINC01546A6NGU7 62 aa9.7□□□□□ -0.86
NPLOC4-209ENST00000572760 LINC01549A6NIU2 74 aa9.7□□□□□ -0.86
NPLOC4-209ENST00000572760 RNASE13Q5GAN3 156 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-209ENST00000572760 Q6ZRN7 208 aaPredicted RBP9.7□□□□□ -0.86
NPLOC4-209ENST00000572760 Q6ZUT4 128 aa9.7□□□□□ -0.86
NPLOC4-209ENST00000572760 EREGO14944 169 aa9.69□□□□□ -0.86
NPLOC4-209ENST00000572760 TNP2Q05952 138 aa9.69□□□□□ -0.86
NPLOC4-209ENST00000572760 SS18Q15532 418 aa9.69□□□□□ -0.86
NPLOC4-209ENST00000572760 Q6ZN92 141 aa9.69□□□□□ -0.86
NPLOC4-209ENST00000572760 PYGO1Q9Y3Y4 419 aa9.69□□□□□ -0.86
NPLOC4-209ENST00000572760 MRPS36P82909 103 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-209ENST00000572760 TOMM6Q96B49 74 aa9.68□□□□□ -0.86
NPLOC4-209ENST00000572760 CHCHD1Q96BP2 118 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-209ENST00000572760 URB1-AS1Q96HZ7 61 aa9.68□□□□□ -0.86
NPLOC4-209ENST00000572760 SCGB3A1Q96QR1 104 aa9.68□□□□□ -0.86
NPLOC4-209ENST00000572760 OPRPNQ99935 248 aaPredicted RBP9.68□□□□□ -0.86
NPLOC4-209ENST00000572760 LINC00959A0A1B0GUT2 108 aa9.67□□□□□ -0.86
NPLOC4-209ENST00000572760 PAPPA-AS1Q5QFB9 102 aa9.67□□□□□ -0.86
NPLOC4-209ENST00000572760 TMEM141Q96I45 108 aa9.67□□□□□ -0.86
NPLOC4-209ENST00000572760 IGLV4-3A0A075B6K6 122 aa9.66□□□□□ -0.86
NPLOC4-209ENST00000572760 TRAV13-1A0A0B4J241 112 aa9.66□□□□□ -0.86
NPLOC4-209ENST00000572760 HSBP1O75506 76 aa9.66□□□□□ -0.86
NPLOC4-209ENST00000572760 HBDP02042 147 aa9.66□□□□□ -0.86
NPLOC4-209ENST00000572760 TEX43Q6ZNM6 134 aa9.66□□□□□ -0.86
NPLOC4-209ENST00000572760 ERASQ7Z444 233 aa9.66□□□□□ -0.86
NPLOC4-209ENST00000572760 CHCHD10Q8WYQ3 142 aaPredicted RBP9.66□□□□□ -0.86
NPLOC4-209ENST00000572760 C2orf88Q9BSF0 95 aa9.66□□□□□ -0.86
NPLOC4-209ENST00000572760 VCX2Q9H322 139 aa9.66□□□□□ -0.86
NPLOC4-209ENST00000572760 GAGE12HA6NDE8 117 aa9.65□□□□□ -0.86
NPLOC4-209ENST00000572760 IFITM10A6NMD0 228 aa9.65□□□□□ -0.86
NPLOC4-209ENST00000572760 C1orf196B1AJZ1 125 aa9.65□□□□□ -0.86
NPLOC4-209ENST00000572760 CCL25O15444 150 aa9.65□□□□□ -0.86
NPLOC4-209ENST00000572760 NPSP0C0P6 89 aa9.65□□□□□ -0.86
NPLOC4-209ENST00000572760 PMCHL1Q16048 86 aa9.65□□□□□ -0.86
NPLOC4-209ENST00000572760 BAALCQ8WXS3 180 aa9.65□□□□□ -0.86
NPLOC4-209ENST00000572760 TIMM17AQ99595 171 aa9.65□□□□□ -0.86
NPLOC4-209ENST00000572760 IGIPA6NJ69 53 aa9.64□□□□□ -0.87
NPLOC4-209ENST00000572760 XCL1P47992 114 aa9.64□□□□□ -0.87
NPLOC4-209ENST00000572760 A0A087WTM6 91 aa9.63□□□□□ -0.87
NPLOC4-209ENST00000572760 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.63□□□□□ -0.87
NPLOC4-209ENST00000572760 LECT2O14960 151 aa9.63□□□□□ -0.87
NPLOC4-209ENST00000572760 HIST1H2BKO60814 126 aa9.63□□□□□ -0.87
NPLOC4-209ENST00000572760 SERF1AO75920 110 aa9.63□□□□□ -0.87
NPLOC4-209ENST00000572760 HIST1H2BJP06899 126 aa9.63□□□□□ -0.87
NPLOC4-209ENST00000572760 HIST1H2BOP23527 126 aa9.63□□□□□ -0.87
NPLOC4-209ENST00000572760 HIST1H2BBP33778 126 aa9.63□□□□□ -0.87
NPLOC4-209ENST00000572760 HIST1H2BDP58876 126 aa9.63□□□□□ -0.87
NPLOC4-209ENST00000572760 HIST1H2BCP62807 126 aa9.63□□□□□ -0.87
NPLOC4-209ENST00000572760 HIST2H2BEQ16778 126 aa9.63□□□□□ -0.87
NPLOC4-209ENST00000572760 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.63□□□□□ -0.87
NPLOC4-209ENST00000572760 MAPKAPK5-AS1Q8N8E1 139 aa9.63□□□□□ -0.87
NPLOC4-209ENST00000572760 HIST1H2BHQ93079 126 aa9.63□□□□□ -0.87
NPLOC4-209ENST00000572760 HIST1H2BNQ99877 126 aa9.63□□□□□ -0.87
NPLOC4-209ENST00000572760 HIST1H2BMQ99879 126 aa9.63□□□□□ -0.87
NPLOC4-209ENST00000572760 RYR3Q15413 4870 aa9.63□□□□□ -0.87
NPLOC4-209ENST00000572760 FAM104AQ969W3 186 aa9.62□□□□□ -0.87
NPLOC4-209ENST00000572760 DNAH10Q8IVF4 4471 aa9.61□□□□□ -0.87
NPLOC4-209ENST00000572760 A0A096LNJ9 63 aa9.61□□□□□ -0.87
NPLOC4-209ENST00000572760 LRCOL1A6NCL2 159 aa9.61□□□□□ -0.87
NPLOC4-209ENST00000572760 ATP5LO75964 103 aa9.61□□□□□ -0.87
NPLOC4-209ENST00000572760 ZC2HC1BQ5TFG8 222 aa9.61□□□□□ -0.87
NPLOC4-209ENST00000572760 KRTAP26-1Q6PEX3 210 aa9.61□□□□□ -0.87
NPLOC4-209ENST00000572760 CD164L2Q6UWJ8 174 aa9.61□□□□□ -0.87
NPLOC4-209ENST00000572760 NDUFA6P56556 154 aa9.6□□□□□ -0.87
NPLOC4-209ENST00000572760 C14orf177Q52M58 125 aa9.6□□□□□ -0.87
NPLOC4-209ENST00000572760 CFAP161Q6P656 301 aa9.6□□□□□ -0.87
NPLOC4-209ENST00000572760 FAM19A2Q8N3H0 131 aa9.6□□□□□ -0.87
NPLOC4-209ENST00000572760 AMELXQ99217 191 aa9.6□□□□□ -0.87
NPLOC4-209ENST00000572760 DNAH2Q9P225 4427 aa9.59□□□□□ -0.87
NPLOC4-209ENST00000572760 USP17L23D6RBM5 183 aa9.59□□□□□ -0.87
NPLOC4-209ENST00000572760 WFDC2Q14508 124 aa9.59□□□□□ -0.87
NPLOC4-209ENST00000572760 PDZD11Q5EBL8 140 aa9.59□□□□□ -0.87
NPLOC4-209ENST00000572760 MALP21145 153 aa9.58□□□□□ -0.88
NPLOC4-209ENST00000572760 UBE2D1P51668 147 aa9.58□□□□□ -0.88
NPLOC4-209ENST00000572760 FOXI1Q12951 378 aa9.58□□□□□ -0.88
NPLOC4-209ENST00000572760 PMVKQ15126 192 aa9.58□□□□□ -0.88
NPLOC4-209ENST00000572760 LINC00173Q6ZV60 143 aa9.58□□□□□ -0.88
NPLOC4-209ENST00000572760 SPATA12Q7Z6I5 190 aa9.58□□□□□ -0.88
NPLOC4-209ENST00000572760 Q8N814 137 aa9.58□□□□□ -0.88
NPLOC4-209ENST00000572760 FRAS1Q86XX4 4008 aa9.58□□□□□ -0.88
NPLOC4-209ENST00000572760 DNAH17Q9UFH2 4485 aa9.58□□□□□ -0.88
NPLOC4-209ENST00000572760 COX7A2LO14548 114 aa9.57□□□□□ -0.88
NPLOC4-209ENST00000572760 NUPR1O60356 82 aa9.57□□□□□ -0.88
NPLOC4-209ENST00000572760 PRSS1P07477 247 aa9.57□□□□□ -0.88
NPLOC4-209ENST00000572760 LINC00310P59036 64 aa9.57□□□□□ -0.88
NPLOC4-209ENST00000572760 SEC11AP67812 179 aa9.57□□□□□ -0.88
NPLOC4-209ENST00000572760 C5orf38Q86SI9 138 aa9.57□□□□□ -0.88
NPLOC4-209ENST00000572760 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.56□□□□□ -0.88
NPLOC4-209ENST00000572760 A0A1B0GVY2 172 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms