RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 LYRM9A8MSI8 78 aa12.24□□□□□ -0.45
RPAIN-208ENST00000571043 MRPS36P82909 103 aaKnown RBP12.24□□□□□ -0.45
RPAIN-208ENST00000571043 MAPKAPK5-AS1Q8N8E1 139 aa12.24□□□□□ -0.45
RPAIN-208ENST00000571043 GTSF1LQ9H1H1 148 aa12.24□□□□□ -0.45
RPAIN-208ENST00000571043 CHAC1Q9BUX1 264 aa12.23□□□□□ -0.45
RPAIN-208ENST00000571043 HUWE1Q7Z6Z7 4374 aaKnown RBP12.23□□□□□ -0.45
RPAIN-208ENST00000571043 MYMXA0A1B0GTQ4 84 aa12.22□□□□□ -0.45
RPAIN-208ENST00000571043 SEC11AP67812 179 aa12.22□□□□□ -0.45
RPAIN-208ENST00000571043 SMAGPQ0VAQ4 97 aa12.22□□□□□ -0.45
RPAIN-208ENST00000571043 DEFB135Q30KP9 77 aa12.22□□□□□ -0.45
RPAIN-208ENST00000571043 TMEM170BQ5T4T1 132 aa12.22□□□□□ -0.45
RPAIN-208ENST00000571043 SBSPONQ8IVN8 264 aa12.22□□□□□ -0.45
RPAIN-208ENST00000571043 DEFB130BP0DP73 79 aa12.21□□□□□ -0.45
RPAIN-208ENST00000571043 DEFB130AP0DP74 79 aa12.21□□□□□ -0.45
RPAIN-208ENST00000571043 CEMP1Q6PRD7 247 aaPredicted RBP12.21□□□□□ -0.45
RPAIN-208ENST00000571043 NTM-AS1Q6ZSK4 140 aa12.21□□□□□ -0.45
RPAIN-208ENST00000571043 CSDC2Q9Y534 153 aaKnown RBP12.21□□□□□ -0.45
RPAIN-208ENST00000571043 MIFP14174 115 aa12.21□□□□□ -0.46
RPAIN-208ENST00000571043 ORAOV1Q8WV07 137 aa12.21□□□□□ -0.46
RPAIN-208ENST00000571043 RNF183Q96D59 192 aa12.21□□□□□ -0.46
RPAIN-208ENST00000571043 A0A0J9YXV3 536 aa12.2□□□□□ -0.46
RPAIN-208ENST00000571043 LINC00694P0DN24 101 aa12.2□□□□□ -0.46
RPAIN-208ENST00000571043 ZNF22P17026 224 aaPredicted RBP12.2□□□□□ -0.46
RPAIN-208ENST00000571043 Q6ZUT4 128 aa12.2□□□□□ -0.46
RPAIN-208ENST00000571043 TMEM223A0PJW6 202 aa12.19□□□□□ -0.46
RPAIN-208ENST00000571043 TAL2Q16559 108 aa12.19□□□□□ -0.46
RPAIN-208ENST00000571043 FAM222AQ5U5X8 452 aa12.19□□□□□ -0.46
RPAIN-208ENST00000571043 DGAT2L7PQ6IED9 249 aa12.19□□□□□ -0.46
RPAIN-208ENST00000571043 IGHV4-28A0A0C4DH34 117 aa12.18□□□□□ -0.46
RPAIN-208ENST00000571043 LOC100131303A0A0U1RQF7 123 aa12.18□□□□□ -0.46
RPAIN-208ENST00000571043 TINCRA0A1B0GVN0 87 aa12.18□□□□□ -0.46
RPAIN-208ENST00000571043 H7C423 109 aa12.18□□□□□ -0.46
RPAIN-208ENST00000571043 B9D2Q9BPU9 175 aa12.18□□□□□ -0.46
RPAIN-208ENST00000571043 ZNF25P17030 456 aaPredicted RBP12.17□□□□□ -0.46
RPAIN-208ENST00000571043 TM2D3Q9BRN9 247 aa12.17□□□□□ -0.46
RPAIN-208ENST00000571043 TMEM243Q9BU79 118 aa12.17□□□□□ -0.46
RPAIN-208ENST00000571043 TENM3Q9P273 2699 aa12.17□□□□□ -0.46
RPAIN-208ENST00000571043 ZNF815PA8K554 130 aa12.16□□□□□ -0.46
RPAIN-208ENST00000571043 LEPROTO15243 131 aa12.16□□□□□ -0.46
RPAIN-208ENST00000571043 Q8NAQ8 132 aa12.16□□□□□ -0.46
RPAIN-208ENST00000571043 COL7A1Q02388 2944 aa12.16□□□□□ -0.46
RPAIN-208ENST00000571043 A6NDN8 102 aa12.16□□□□□ -0.46
RPAIN-208ENST00000571043 UBE2D1P51668 147 aa12.16□□□□□ -0.46
RPAIN-208ENST00000571043 RNASE13Q5GAN3 156 aaKnown RBP12.16□□□□□ -0.46
RPAIN-208ENST00000571043 PRO0255Q9UI72 69 aa12.16□□□□□ -0.46
RPAIN-208ENST00000571043 TAX1BP3O14907 124 aa12.15□□□□□ -0.46
RPAIN-208ENST00000571043 TIRAPP58753 221 aa12.15□□□□□ -0.46
RPAIN-208ENST00000571043 TM2D2Q9BX73 214 aa12.15□□□□□ -0.46
RPAIN-208ENST00000571043 COX11Q9Y6N1 276 aa12.15□□□□□ -0.46
RPAIN-208ENST00000571043 J3QQQ9 107 aa12.14□□□□□ -0.47
RPAIN-208ENST00000571043 UBE2L6O14933 153 aa12.14□□□□□ -0.47
RPAIN-208ENST00000571043 PLEKHB2Q96CS7 222 aa12.14□□□□□ -0.47
RPAIN-208ENST00000571043 SPATA25Q9BR10 227 aa12.14□□□□□ -0.47
RPAIN-208ENST00000571043 TRBV6-8A0A0A6YYG3 113 aa12.13□□□□□ -0.47
RPAIN-208ENST00000571043 LGALS3P17931 250 aaKnown RBP12.13□□□□□ -0.47
RPAIN-208ENST00000571043 FAM19A3Q7Z5A8 133 aa12.13□□□□□ -0.47
RPAIN-208ENST00000571043 CEND1Q8N111 149 aa12.13□□□□□ -0.47
RPAIN-208ENST00000571043 OR5A1Q8NGJ0 315 aa12.13□□□□□ -0.47
RPAIN-208ENST00000571043 GCSHP23434 173 aa12.12□□□□□ -0.47
RPAIN-208ENST00000571043 TSPEAR-AS2P59090 65 aa12.12□□□□□ -0.47
RPAIN-208ENST00000571043 AMMECR1LQ6DCA0 310 aa12.12□□□□□ -0.47
RPAIN-208ENST00000571043 TMEM101Q96IK0 257 aa12.12□□□□□ -0.47
RPAIN-208ENST00000571043 RETNQ9HD89 108 aa12.12□□□□□ -0.47
RPAIN-208ENST00000571043 CDC42SE2Q9NRR3 84 aa12.12□□□□□ -0.47
RPAIN-208ENST00000571043 IGLV5-45A0A087WSX0 123 aa12.11□□□□□ -0.47
RPAIN-208ENST00000571043 SPART-AS1P0CW21 52 aa12.11□□□□□ -0.47
RPAIN-208ENST00000571043 GYPEP15421 78 aa12.11□□□□□ -0.47
RPAIN-208ENST00000571043 DAD1P61803 113 aa12.11□□□□□ -0.47
RPAIN-208ENST00000571043 GEMIN7Q9H840 131 aaKnown RBP12.11□□□□□ -0.47
RPAIN-208ENST00000571043 FBN3Q75N90 2809 aa12.11□□□□□ -0.47
RPAIN-208ENST00000571043 H3BRM9 83 aa12.11□□□□□ -0.47
RPAIN-208ENST00000571043 DEFB4AO15263 64 aa12.11□□□□□ -0.47
RPAIN-208ENST00000571043 SCGB1D4Q6XE38 83 aa12.11□□□□□ -0.47
RPAIN-208ENST00000571043 ATP6V0E2Q8NHE4 81 aa12.11□□□□□ -0.47
RPAIN-208ENST00000571043 HIST1H4GQ99525 98 aa12.11□□□□□ -0.47
RPAIN-208ENST00000571043 TEX48A0A1B0GUV7 120 aa12.1□□□□□ -0.47
RPAIN-208ENST00000571043 PAX4O43316 350 aa12.1□□□□□ -0.47
RPAIN-208ENST00000571043 NHLRC4P0CG21 123 aaPredicted RBP12.1□□□□□ -0.47
RPAIN-208ENST00000571043 FXYD2P54710 66 aa12.1□□□□□ -0.47
RPAIN-208ENST00000571043 IGHV1-58A0A0C4DH39 117 aa12.09□□□□□ -0.47
RPAIN-208ENST00000571043 ATP5G1P05496 136 aa12.09□□□□□ -0.47
RPAIN-208ENST00000571043 HERVK_113P63121 156 aa12.09□□□□□ -0.47
RPAIN-208ENST00000571043 LINC00469Q8N7U9 141 aa12.09□□□□□ -0.47
RPAIN-208ENST00000571043 A0A0J9YY99 117 aa12.08□□□□□ -0.48
RPAIN-208ENST00000571043 Q6ZVH6 145 aa12.08□□□□□ -0.48
RPAIN-208ENST00000571043 CELA1Q9UNI1 258 aa12.08□□□□□ -0.48
RPAIN-208ENST00000571043 IGHV3-30-3P0DP02 117 aa12.07□□□□□ -0.48
RPAIN-208ENST00000571043 PTTG1IPP53801 180 aa12.07□□□□□ -0.48
RPAIN-208ENST00000571043 LINC00242Q5T6M2 205 aa12.07□□□□□ -0.48
RPAIN-208ENST00000571043 SPANXB1Q9NS25 103 aaPredicted RBP12.07□□□□□ -0.48
RPAIN-208ENST00000571043 SMIM13P0DJ93 91 aa12.06□□□□□ -0.48
RPAIN-208ENST00000571043 GAGE6Q13070 117 aa12.06□□□□□ -0.48
RPAIN-208ENST00000571043 VSIG2Q96IQ7 327 aa12.06□□□□□ -0.48
RPAIN-208ENST00000571043 IGHV3-64A0A075B6Q5 118 aa12.06□□□□□ -0.48
RPAIN-208ENST00000571043 CHCHD5Q9BSY4 110 aa12.06□□□□□ -0.48
RPAIN-208ENST00000571043 STAB2Q8WWQ8 2551 aa12.05□□□□□ -0.48
RPAIN-208ENST00000571043 CDKN2A-AS1Q9UH64 79 aa12.05□□□□□ -0.48
RPAIN-208ENST00000571043 TRAV26-1A0A087WT03 109 aa12.04□□□□□ -0.48
RPAIN-208ENST00000571043 TRAV13-1A0A0B4J241 112 aa12.04□□□□□ -0.48
RPAIN-208ENST00000571043 C9orf118A6NHY6 69 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms