RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 LINC00959A0A1B0GUT2 108 aa13.08□□□□□ -0.32
LITAF-205ENST00000570904 SMKR1H3BMG3 65 aa13.08□□□□□ -0.32
LITAF-205ENST00000570904 CCL25O15444 150 aa13.08□□□□□ -0.32
LITAF-205ENST00000570904 POLR2KP53803 58 aaKnown RBP13.08□□□□□ -0.32
LITAF-205ENST00000570904 PLAC8Q9NZF1 115 aa13.08□□□□□ -0.32
LITAF-205ENST00000570904 V9GYV3 84 aa13.08□□□□□ -0.32
LITAF-205ENST00000570904 MAJINQ3KP22 176 aa13.07□□□□□ -0.32
LITAF-205ENST00000570904 TRBV27A0A0K0K1C4 114 aa13.06□□□□□ -0.32
LITAF-205ENST00000570904 NUP35Q8NFH5 326 aa13.06□□□□□ -0.32
LITAF-205ENST00000570904 LINC00526Q96FQ7 95 aa13.06□□□□□ -0.32
LITAF-205ENST00000570904 C7orf77A4D0Y5 90 aa13.05□□□□□ -0.32
LITAF-205ENST00000570904 PHOX2AO14813 284 aa13.05□□□□□ -0.32
LITAF-205ENST00000570904 RIGQ13278 110 aa13.05□□□□□ -0.32
LITAF-205ENST00000570904 ISOC2Q96AB3 205 aa13.05□□□□□ -0.32
LITAF-205ENST00000570904 MRPL52Q86TS9 123 aaKnown RBP13.04□□□□□ -0.32
LITAF-205ENST00000570904 CDC42SE2Q9NRR3 84 aa13.04□□□□□ -0.32
LITAF-205ENST00000570904 IGHV1-58A0A0C4DH39 117 aa13.03□□□□□ -0.32
LITAF-205ENST00000570904 A0A1B0GVG6 124 aa13.03□□□□□ -0.32
LITAF-205ENST00000570904 RPL23P62829 140 aaKnown RBP13.03□□□□□ -0.32
LITAF-205ENST00000570904 SS18Q15532 418 aa13.03□□□□□ -0.32
LITAF-205ENST00000570904 A0A096LNI7 61 aa13.02□□□□□ -0.33
LITAF-205ENST00000570904 TMEM241Q24JQ0 296 aa13.02□□□□□ -0.33
LITAF-205ENST00000570904 Q6ZRU5 148 aa13.02□□□□□ -0.33
LITAF-205ENST00000570904 ZNF664Q8N3J9 261 aa13.02□□□□□ -0.33
LITAF-205ENST00000570904 STPG4Q8N801 248 aa13.02□□□□□ -0.33
LITAF-205ENST00000570904 NRACQ8N912 160 aa13.02□□□□□ -0.33
LITAF-205ENST00000570904 C7orf33Q8WU49 177 aa13.02□□□□□ -0.33
LITAF-205ENST00000570904 UBR4Q5T4S7 5183 aa13.02□□□□□ -0.33
LITAF-205ENST00000570904 C9JQL5 133 aa13.01□□□□□ -0.33
LITAF-205ENST00000570904 VCYO14598 125 aa13.01□□□□□ -0.33
LITAF-205ENST00000570904 MT1HL1P0DM35 61 aa13.01□□□□□ -0.33
LITAF-205ENST00000570904 FCER1GP30273 86 aa13.01□□□□□ -0.33
LITAF-205ENST00000570904 ADIRFQ15847 76 aa13.01□□□□□ -0.33
LITAF-205ENST00000570904 CD164L2Q6UWJ8 174 aa13.01□□□□□ -0.33
LITAF-205ENST00000570904 NAT8BQ9UHF3 227 aa13.01□□□□□ -0.33
LITAF-205ENST00000570904 TNXBP22105 4242 aa13.01□□□□□ -0.33
LITAF-205ENST00000570904 SUMO2P61956 95 aaKnown RBP13□□□□□ -0.33
LITAF-205ENST00000570904 CARD19Q96LW7 228 aa13□□□□□ -0.33
LITAF-205ENST00000570904 PLA2G2DQ9UNK4 145 aa13□□□□□ -0.33
LITAF-205ENST00000570904 FAM74A3Q4VXF1 159 aa12.99□□□□□ -0.33
LITAF-205ENST00000570904 RNASE13Q5GAN3 156 aaKnown RBP12.99□□□□□ -0.33
LITAF-205ENST00000570904 SRSF3P84103 164 aaKnown RBP12.98□□□□□ -0.33
LITAF-205ENST00000570904 MRPL51Q4U2R6 128 aaKnown RBP12.98□□□□□ -0.33
LITAF-205ENST00000570904 FAM104BQ5XKR9 115 aa12.98□□□□□ -0.33
LITAF-205ENST00000570904 NAT8Q9UHE5 227 aa12.98□□□□□ -0.33
LITAF-205ENST00000570904 UBE2D4Q9Y2X8 147 aa12.98□□□□□ -0.33
LITAF-205ENST00000570904 ZNF561-AS1K7EIQ3 104 aa12.97□□□□□ -0.33
LITAF-205ENST00000570904 PPP1R17O96001 155 aa12.97□□□□□ -0.33
LITAF-205ENST00000570904 KIR2DL4Q99706 377 aa12.97□□□□□ -0.33
LITAF-205ENST00000570904 SMIM27A0A1W2PRY6 76 aa12.96□□□□□ -0.33
LITAF-205ENST00000570904 CAMPP49913 170 aa12.96□□□□□ -0.33
LITAF-205ENST00000570904 PPP1R2P9O14990 202 aa12.95□□□□□ -0.34
LITAF-205ENST00000570904 PRR3P79522 188 aaKnown RBP12.95□□□□□ -0.34
LITAF-205ENST00000570904 SYCNQ0VAF6 134 aa12.95□□□□□ -0.34
LITAF-205ENST00000570904 Q6ZUT4 128 aa12.95□□□□□ -0.34
LITAF-205ENST00000570904 TRAV13-1A0A0B4J241 112 aa12.94□□□□□ -0.34
LITAF-205ENST00000570904 C1orf196B1AJZ1 125 aa12.94□□□□□ -0.34
LITAF-205ENST00000570904 LINC00474Q9P2X8 69 aa12.94□□□□□ -0.34
LITAF-205ENST00000570904 PKIGQ9Y2B9 76 aa12.94□□□□□ -0.34
LITAF-205ENST00000570904 CSDC2Q9Y534 153 aaKnown RBP12.94□□□□□ -0.34
LITAF-205ENST00000570904 COX7A2LO14548 114 aa12.93□□□□□ -0.34
LITAF-205ENST00000570904 MALP21145 153 aa12.93□□□□□ -0.34
LITAF-205ENST00000570904 SMAGPQ0VAQ4 97 aa12.93□□□□□ -0.34
LITAF-205ENST00000570904 IGLV4-69A0A075B6H9 119 aa12.92□□□□□ -0.34
LITAF-205ENST00000570904 CKS2P33552 79 aa12.92□□□□□ -0.34
LITAF-205ENST00000570904 PEA15Q15121 130 aa12.92□□□□□ -0.34
LITAF-205ENST00000570904 MRPL54Q6P161 138 aaKnown RBP12.91□□□□□ -0.34
LITAF-205ENST00000570904 C20orf78Q9BR46 151 aa12.91□□□□□ -0.34
LITAF-205ENST00000570904 A0A1B0GW15 77 aa12.9□□□□□ -0.34
LITAF-205ENST00000570904 LINC00862A6NCI5 91 aa12.9□□□□□ -0.34
LITAF-205ENST00000570904 C5orf38Q86SI9 138 aa12.9□□□□□ -0.34
LITAF-205ENST00000570904 TMEM18Q96B42 140 aa12.9□□□□□ -0.34
LITAF-205ENST00000570904 TRBV24-1A0A075B6N3 115 aa12.89□□□□□ -0.35
LITAF-205ENST00000570904 TNFRSF6BO95407 300 aa12.89□□□□□ -0.35
LITAF-205ENST00000570904 RPL39P62891 51 aaKnown RBP12.89□□□□□ -0.35
LITAF-205ENST00000570904 RPL32P62910 135 aaKnown RBP12.89□□□□□ -0.35
LITAF-205ENST00000570904 GAGE2BQ13066 116 aa12.89□□□□□ -0.35
LITAF-205ENST00000570904 TIMM21Q9BVV7 248 aa12.89□□□□□ -0.35
LITAF-205ENST00000570904 D6R8Y8 96 aa12.88□□□□□ -0.35
LITAF-205ENST00000570904 PTTG1IPP53801 180 aa12.88□□□□□ -0.35
LITAF-205ENST00000570904 HBBP68871 147 aa12.88□□□□□ -0.35
LITAF-205ENST00000570904 SMIM2Q9BVW6 85 aa12.88□□□□□ -0.35
LITAF-205ENST00000570904 LOC107984640A0A0U1RRK4 108 aa12.87□□□□□ -0.35
LITAF-205ENST00000570904 CAMK2N2Q96S95 79 aa12.87□□□□□ -0.35
LITAF-205ENST00000570904 SMDT1Q9H4I9 107 aa12.87□□□□□ -0.35
LITAF-205ENST00000570904 A0A1B0GXF2 115 aa12.86□□□□□ -0.35
LITAF-205ENST00000570904 NPYP01303 97 aa12.86□□□□□ -0.35
LITAF-205ENST00000570904 F8W036 122 aa12.85□□□□□ -0.35
LITAF-205ENST00000570904 TCAPO15273 167 aa12.85□□□□□ -0.35
LITAF-205ENST00000570904 S100A8P05109 93 aa12.85□□□□□ -0.35
LITAF-205ENST00000570904 SPAG11BQ08648 103 aa12.85□□□□□ -0.35
LITAF-205ENST00000570904 FAM104AQ969W3 186 aa12.85□□□□□ -0.35
LITAF-205ENST00000570904 C2orf48Q96LS8 159 aa12.85□□□□□ -0.35
LITAF-205ENST00000570904 APOMO95445 188 aa12.84□□□□□ -0.35
LITAF-205ENST00000570904 OPRPNQ99935 248 aaPredicted RBP12.84□□□□□ -0.35
LITAF-205ENST00000570904 A0A1W2PNN7 141 aa12.83□□□□□ -0.36
LITAF-205ENST00000570904 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.83□□□□□ -0.36
LITAF-205ENST00000570904 A0A0J9YXV3 536 aa12.82□□□□□ -0.36
LITAF-205ENST00000570904 RPL18AQ02543 176 aaKnown RBP12.82□□□□□ -0.36
LITAF-205ENST00000570904 Q6ZRP5 223 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms