RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 SPACA4Q8TDM5 124 aa10.89□□□□□ -0.67
MAP1LC3B-208ENST00000570189 TMEM101Q96IK0 257 aa10.89□□□□□ -0.67
MAP1LC3B-208ENST00000570189 TMEM242Q9NWH2 141 aa10.89□□□□□ -0.67
MAP1LC3B-208ENST00000570189 NAT8Q9UHE5 227 aa10.89□□□□□ -0.67
MAP1LC3B-208ENST00000570189 SMIM27A0A1W2PRY6 76 aa10.88□□□□□ -0.67
MAP1LC3B-208ENST00000570189 NRACQ8N912 160 aa10.88□□□□□ -0.67
MAP1LC3B-208ENST00000570189 CSDC2Q9Y534 153 aaKnown RBP10.88□□□□□ -0.67
MAP1LC3B-208ENST00000570189 IGKV3OR2-268A0A0C4DH90 116 aa10.87□□□□□ -0.67
MAP1LC3B-208ENST00000570189 LINC00959A0A1B0GUT2 108 aa10.87□□□□□ -0.67
MAP1LC3B-208ENST00000570189 A0A1B0GW15 77 aa10.87□□□□□ -0.67
MAP1LC3B-208ENST00000570189 C7orf77A4D0Y5 90 aa10.87□□□□□ -0.67
MAP1LC3B-208ENST00000570189 VCYO14598 125 aa10.87□□□□□ -0.67
MAP1LC3B-208ENST00000570189 CDC42SE2Q9NRR3 84 aa10.87□□□□□ -0.67
MAP1LC3B-208ENST00000570189 LINC00862A6NCI5 91 aa10.86□□□□□ -0.67
MAP1LC3B-208ENST00000570189 C9JQL5 133 aa10.86□□□□□ -0.67
MAP1LC3B-208ENST00000570189 PPP1R2P9O14990 202 aa10.86□□□□□ -0.67
MAP1LC3B-208ENST00000570189 RPL32P62910 135 aaKnown RBP10.86□□□□□ -0.67
MAP1LC3B-208ENST00000570189 PEA15Q15121 130 aa10.86□□□□□ -0.67
MAP1LC3B-208ENST00000570189 PLAC8Q9NZF1 115 aa10.86□□□□□ -0.67
MAP1LC3B-208ENST00000570189 CCL25O15444 150 aa10.85□□□□□ -0.67
MAP1LC3B-208ENST00000570189 SUMO2P61956 95 aaKnown RBP10.85□□□□□ -0.67
MAP1LC3B-208ENST00000570189 SMAGPQ0VAQ4 97 aa10.85□□□□□ -0.67
MAP1LC3B-208ENST00000570189 FAM104BQ5XKR9 115 aa10.85□□□□□ -0.67
MAP1LC3B-208ENST00000570189 ZNF664Q8N3J9 261 aa10.85□□□□□ -0.67
MAP1LC3B-208ENST00000570189 TRBV24-1A0A075B6N3 115 aa10.84□□□□□ -0.67
MAP1LC3B-208ENST00000570189 A0A087WYN8 130 aa10.84□□□□□ -0.67
MAP1LC3B-208ENST00000570189 ADIRFQ15847 76 aa10.84□□□□□ -0.67
MAP1LC3B-208ENST00000570189 CD164L2Q6UWJ8 174 aa10.84□□□□□ -0.67
MAP1LC3B-208ENST00000570189 PKIGQ9Y2B9 76 aa10.84□□□□□ -0.67
MAP1LC3B-208ENST00000570189 IGHV1-58A0A0C4DH39 117 aa10.83□□□□□ -0.68
MAP1LC3B-208ENST00000570189 SRSF3P84103 164 aaKnown RBP10.83□□□□□ -0.68
MAP1LC3B-208ENST00000570189 SS18Q15532 418 aa10.83□□□□□ -0.68
MAP1LC3B-208ENST00000570189 MRPL51Q4U2R6 128 aaKnown RBP10.83□□□□□ -0.68
MAP1LC3B-208ENST00000570189 KIR2DL4Q99706 377 aa10.83□□□□□ -0.68
MAP1LC3B-208ENST00000570189 C20orf78Q9BR46 151 aa10.83□□□□□ -0.68
MAP1LC3B-208ENST00000570189 SMKR1H3BMG3 65 aa10.82□□□□□ -0.68
MAP1LC3B-208ENST00000570189 TCAPO15273 167 aa10.82□□□□□ -0.68
MAP1LC3B-208ENST00000570189 CHTF8P0CG12 524 aa10.82□□□□□ -0.68
MAP1LC3B-208ENST00000570189 XCL1P47992 114 aa10.82□□□□□ -0.68
MAP1LC3B-208ENST00000570189 HNRNPA3P51991 378 aaKnown RBP10.82□□□□□ -0.68
MAP1LC3B-208ENST00000570189 HIGD2BQ4VC39 106 aa10.82□□□□□ -0.68
MAP1LC3B-208ENST00000570189 TIMM21Q9BVV7 248 aa10.82□□□□□ -0.68
MAP1LC3B-208ENST00000570189 FCER1GP30273 86 aa10.81□□□□□ -0.68
MAP1LC3B-208ENST00000570189 COX6A2Q02221 97 aa10.81□□□□□ -0.68
MAP1LC3B-208ENST00000570189 UBE2D4Q9Y2X8 147 aa10.81□□□□□ -0.68
MAP1LC3B-208ENST00000570189 C1orf196B1AJZ1 125 aa10.8□□□□□ -0.68
MAP1LC3B-208ENST00000570189 S100A8P05109 93 aa10.8□□□□□ -0.68
MAP1LC3B-208ENST00000570189 PRSS3P2Q8NHM4 247 aa10.8□□□□□ -0.68
MAP1LC3B-208ENST00000570189 A0A1B0GXF2 115 aa10.79□□□□□ -0.68
MAP1LC3B-208ENST00000570189 Q6ZRU5 148 aa10.79□□□□□ -0.68
MAP1LC3B-208ENST00000570189 LINC00474Q9P2X8 69 aa10.79□□□□□ -0.68
MAP1LC3B-208ENST00000570189 PHOX2AO14813 284 aa10.78□□□□□ -0.68
MAP1LC3B-208ENST00000570189 HBBP68871 147 aa10.78□□□□□ -0.68
MAP1LC3B-208ENST00000570189 SERTAD4-AS1Q5TG53 156 aa10.78□□□□□ -0.68
MAP1LC3B-208ENST00000570189 TMEM18Q96B42 140 aa10.78□□□□□ -0.68
MAP1LC3B-208ENST00000570189 F8W036 122 aa10.77□□□□□ -0.69
MAP1LC3B-208ENST00000570189 CKS2P33552 79 aa10.77□□□□□ -0.69
MAP1LC3B-208ENST00000570189 CAMPP49913 170 aa10.77□□□□□ -0.69
MAP1LC3B-208ENST00000570189 DPH3Q96FX2 82 aa10.77□□□□□ -0.69
MAP1LC3B-208ENST00000570189 TNFRSF6BO95407 300 aa10.76□□□□□ -0.69
MAP1LC3B-208ENST00000570189 PPBPP02775 128 aa10.76□□□□□ -0.69
MAP1LC3B-208ENST00000570189 ATP5L2Q7Z4Y8 100 aa10.76□□□□□ -0.69
MAP1LC3B-208ENST00000570189 C7orf33Q8WU49 177 aa10.76□□□□□ -0.69
MAP1LC3B-208ENST00000570189 CARD19Q96LW7 228 aa10.76□□□□□ -0.69
MAP1LC3B-208ENST00000570189 A0A096LNI7 61 aa10.75□□□□□ -0.69
MAP1LC3B-208ENST00000570189 ZNF561-AS1K7EIQ3 104 aa10.75□□□□□ -0.69
MAP1LC3B-208ENST00000570189 MAJINQ3KP22 176 aa10.75□□□□□ -0.69
MAP1LC3B-208ENST00000570189 SMIM2Q9BVW6 85 aa10.75□□□□□ -0.69
MAP1LC3B-208ENST00000570189 COX7A2LO14548 114 aa10.74□□□□□ -0.69
MAP1LC3B-208ENST00000570189 SYCNQ0VAF6 134 aa10.74□□□□□ -0.69
MAP1LC3B-208ENST00000570189 HMCN2Q8NDA2 5059 aa10.74□□□□□ -0.69
MAP1LC3B-208ENST00000570189 IGKV2-24A0A0C4DH68 120 aa10.73□□□□□ -0.69
MAP1LC3B-208ENST00000570189 D6R8Y8 96 aa10.73□□□□□ -0.69
MAP1LC3B-208ENST00000570189 MRPS36P82909 103 aaKnown RBP10.73□□□□□ -0.69
MAP1LC3B-208ENST00000570189 Q6ZUT4 128 aa10.73□□□□□ -0.69
MAP1LC3B-208ENST00000570189 STPG4Q8N801 248 aa10.73□□□□□ -0.69
MAP1LC3B-208ENST00000570189 FAM104AQ969W3 186 aa10.73□□□□□ -0.69
MAP1LC3B-208ENST00000570189 SPANXA1Q9NS26 97 aa10.73□□□□□ -0.69
MAP1LC3B-208ENST00000570189 PNRC1Q12796 327 aaPredicted RBP10.72□□□□□ -0.69
MAP1LC3B-208ENST00000570189 MRPL54Q6P161 138 aaKnown RBP10.72□□□□□ -0.69
MAP1LC3B-208ENST00000570189 C2orf48Q96LS8 159 aa10.72□□□□□ -0.69
MAP1LC3B-208ENST00000570189 PRSS47A8MTI9 375 aa10.71□□□□□ -0.69
MAP1LC3B-208ENST00000570189 NPYP01303 97 aa10.71□□□□□ -0.69
MAP1LC3B-208ENST00000570189 MT1HL1P0DM35 61 aa10.71□□□□□ -0.69
MAP1LC3B-208ENST00000570189 MALP21145 153 aa10.71□□□□□ -0.69
MAP1LC3B-208ENST00000570189 LINC00526Q96FQ7 95 aa10.71□□□□□ -0.69
MAP1LC3B-208ENST00000570189 IGLV4-69A0A075B6H9 119 aa10.7□□□□□ -0.7
MAP1LC3B-208ENST00000570189 TRAV13-1A0A0B4J241 112 aa10.7□□□□□ -0.7
MAP1LC3B-208ENST00000570189 F8WDY8 70 aa10.7□□□□□ -0.7
MAP1LC3B-208ENST00000570189 ORMDL3Q8N138 153 aa10.7□□□□□ -0.7
MAP1LC3B-208ENST00000570189 LOC107984640A0A0U1RRK4 108 aa10.69□□□□□ -0.7
MAP1LC3B-208ENST00000570189 APOMO95445 188 aa10.69□□□□□ -0.7
MAP1LC3B-208ENST00000570189 PTTG1IPP53801 180 aa10.69□□□□□ -0.7
MAP1LC3B-208ENST00000570189 RPL39P62891 51 aaKnown RBP10.69□□□□□ -0.7
MAP1LC3B-208ENST00000570189 PRR3P79522 188 aaKnown RBP10.69□□□□□ -0.7
MAP1LC3B-208ENST00000570189 RNF151Q2KHN1 245 aa10.69□□□□□ -0.7
MAP1LC3B-208ENST00000570189 RNASE13Q5GAN3 156 aaKnown RBP10.69□□□□□ -0.7
MAP1LC3B-208ENST00000570189 OR10D4PQ8NGN7 298 aa10.69□□□□□ -0.7
MAP1LC3B-208ENST00000570189 LAMTOR2Q9Y2Q5 125 aa10.69□□□□□ -0.7
MAP1LC3B-208ENST00000570189 IGHV3OR16-9A0A0B4J2B5 98 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms