RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 TOMM6Q96B49 74 aa2.38□□□□□ -2.03
UBR1-211ENST00000569971 ANAPC11Q9NYG5 84 aa2.38□□□□□ -2.03
UBR1-211ENST00000569971 MRPL35Q9NZE8 188 aaKnown RBP2.38□□□□□ -2.03
UBR1-211ENST00000569971 TP73-AS1Q9UF72 201 aa2.38□□□□□ -2.03
UBR1-211ENST00000569971 HHLA3Q9XRX5 114 aa2.38□□□□□ -2.03
UBR1-211ENST00000569971 CYSLTR1Q9Y271 337 aa2.38□□□□□ -2.03
UBR1-211ENST00000569971 TSSC4Q9Y5U2 329 aaPredicted RBP2.38□□□□□ -2.03
UBR1-211ENST00000569971 ZZEF1O43149 2961 aa2.38□□□□□ -2.03
UBR1-211ENST00000569971 ARHGAP32A7KAX9 2087 aa2.38□□□□□ -2.03
UBR1-211ENST00000569971 PTPRZ1P23471 2315 aaPredicted RBP2.37□□□□□ -2.03
UBR1-211ENST00000569971 PCNX1Q96RV3 2341 aa2.37□□□□□ -2.03
UBR1-211ENST00000569971 ASPMQ8IZT6 3477 aa2.37□□□□□ -2.03
UBR1-211ENST00000569971 SPENQ96T58 3664 aaKnown RBP2.37□□□□□ -2.03
UBR1-211ENST00000569971 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.37□□□□□ -2.03
UBR1-211ENST00000569971 A0A096LNT2 108 aa2.37□□□□□ -2.03
UBR1-211ENST00000569971 TRAV2A0A0B4J234 112 aa2.37□□□□□ -2.03
UBR1-211ENST00000569971 TRBV6-5A0A0K0K1A5 114 aa2.37□□□□□ -2.03
UBR1-211ENST00000569971 K7EP13 123 aa2.37□□□□□ -2.03
UBR1-211ENST00000569971 FABP2P12104 132 aa2.37□□□□□ -2.03
UBR1-211ENST00000569971 RNASE3P12724 160 aaKnown RBP2.37□□□□□ -2.03
UBR1-211ENST00000569971 TCTAP57738 103 aa2.37□□□□□ -2.03
UBR1-211ENST00000569971 DEFB1P60022 68 aa2.37□□□□□ -2.03
UBR1-211ENST00000569971 ZNF56Q15929 161 aa2.37□□□□□ -2.03
UBR1-211ENST00000569971 Q6ZQT7 251 aa2.37□□□□□ -2.03
UBR1-211ENST00000569971 Q6ZVH6 145 aa2.37□□□□□ -2.03
UBR1-211ENST00000569971 KRTAP11-1Q8IUC1 163 aa2.37□□□□□ -2.03
UBR1-211ENST00000569971 TMEM86BQ8N661 226 aa2.37□□□□□ -2.03
UBR1-211ENST00000569971 DYNLRB2Q8TF09 96 aa2.37□□□□□ -2.03
UBR1-211ENST00000569971 RPL39LQ96EH5 51 aaKnown RBP2.37□□□□□ -2.03
UBR1-211ENST00000569971 TMEM141Q96I45 108 aa2.37□□□□□ -2.03
UBR1-211ENST00000569971 MAP1BP46821 2468 aaKnown RBP2.37□□□□□ -2.03
UBR1-211ENST00000569971 IGF2RP11717 2491 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 ADGRG4Q8IZF6 3080 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 PRRC2AP48634 2157 aaKnown RBP2.36□□□□□ -2.03
UBR1-211ENST00000569971 ITPR1Q14643 2758 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 IGLV1-50A0A075B6I6 118 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 TRBV25-1A0A075B6N4 114 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 IGKV2D-26A0A0A0MRZ7 120 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 TRAV8-6A0A0B4J262 113 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 IGHV3OR16-9A0A0B4J2B5 98 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 TRBV27A0A0K0K1C4 114 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 MYMXA0A1B0GTQ4 84 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 LINC01619G3V211 115 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 H3BUT2 72 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 PRB1P04280 392 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 RPL18AQ02543 176 aaKnown RBP2.36□□□□□ -2.03
UBR1-211ENST00000569971 PMVKQ15126 192 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 RBMY1FQ15415 496 aaKnown RBP2.36□□□□□ -2.03
UBR1-211ENST00000569971 RHOHQ15669 191 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 SPINK13Q1W4C9 94 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 DEFB116Q30KQ4 102 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 FAM74A4Q5TZK3 123 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 ZFP2Q6ZN57 461 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 Q8N2B8 174 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 OR5A1Q8NGJ0 315 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 C4orf3Q8WVX3 66 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 RAB37Q96AX2 223 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 TP53TG1Q9Y2A0 90 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 ABCA4P78363 2273 aa2.36□□□□□ -2.03
UBR1-211ENST00000569971 DCHS2Q6V1P9 2916 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 NACAE9PAV3 2078 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 TRAV12-2A0A075B6T6 113 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 A0A1W2PPM0 123 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 SDHAF1A6NFY7 115 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 ZNF815PA8K554 130 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 A8MWV9 139 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 I3L3M4 83 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 K7EP34 96 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 K7ERU9 68 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 M0R2P5 195 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 POLR2KP53803 58 aaKnown RBP2.35□□□□□ -2.03
UBR1-211ENST00000569971 CMC4P56277 68 aaPredicted RBP2.35□□□□□ -2.03
UBR1-211ENST00000569971 LINC00315P59091 139 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 DEFB131AP59861 70 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 KRTAP10-8P60410 259 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 LYRM7Q5U5X0 104 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 C10orf99Q6UWK7 81 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 AMTNQ6UX39 209 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 SCGB1D4Q6XE38 83 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 NTM-AS1Q6ZSK4 140 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 FAM104AQ969W3 186 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 PTH2Q96A98 100 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 PRADC1Q9BSG0 188 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 TMEM243Q9BU79 118 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 CST9LQ9H4G1 147 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 NHP2Q9NX24 153 aaKnown RBP2.35□□□□□ -2.03
UBR1-211ENST00000569971 SPCS1Q9Y6A9 102 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 V9GYY9 64 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 TACC2O95359 2948 aa2.35□□□□□ -2.03
UBR1-211ENST00000569971 IGLV4-69A0A075B6H9 119 aa2.34□□□□□ -2.03
UBR1-211ENST00000569971 IGIPA6NJ69 53 aa2.34□□□□□ -2.03
UBR1-211ENST00000569971 C11orf86A6NJI1 115 aa2.34□□□□□ -2.03
UBR1-211ENST00000569971 KNCNA6PVL3 124 aa2.34□□□□□ -2.03
UBR1-211ENST00000569971 A8MTW9 85 aa2.34□□□□□ -2.03
UBR1-211ENST00000569971 H3BMM0 161 aa2.34□□□□□ -2.03
UBR1-211ENST00000569971 M0QY20 66 aa2.34□□□□□ -2.03
UBR1-211ENST00000569971 CRYGDP07320 174 aa2.34□□□□□ -2.03
UBR1-211ENST00000569971 HTN1P15515 57 aa2.34□□□□□ -2.03
UBR1-211ENST00000569971 LGALS3P17931 250 aaKnown RBP2.34□□□□□ -2.03
UBR1-211ENST00000569971 FXYD2P54710 66 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms