RNA–Protein interactions for RNA: ENST00000569930.1

TSC2-226, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 2,621 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-226ENST00000569930 LINC01587Q99440 93 aa13.54□□□□□ -0.24
TSC2-226ENST00000569930 PTPN13Q12923 2485 aa13.54□□□□□ -0.24
TSC2-226ENST00000569930 FAM236AA0A1B0GUQ0 79 aa13.53□□□□□ -0.24
TSC2-226ENST00000569930 FAM236BA0A1B0GV22 79 aa13.53□□□□□ -0.24
TSC2-226ENST00000569930 TIMM17BO60830 172 aa13.53□□□□□ -0.24
TSC2-226ENST00000569930 LINC00467Q9BRT7 94 aa13.53□□□□□ -0.24
TSC2-226ENST00000569930 EDA2RQ9HAV5 297 aa13.53□□□□□ -0.24
TSC2-226ENST00000569930 HELZ2Q9BYK8 2649 aaKnown RBP13.53□□□□□ -0.24
TSC2-226ENST00000569930 A0A0U1RRA0 63 aa13.52□□□□□ -0.24
TSC2-226ENST00000569930 MAPK1IP1LQ8NDC0 245 aa13.52□□□□□ -0.24
TSC2-226ENST00000569930 IGHV3-38A0A0C4DH36 116 aa13.52□□□□□ -0.25
TSC2-226ENST00000569930 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.52□□□□□ -0.25
TSC2-226ENST00000569930 SMCR5Q8TEV8 140 aa13.51□□□□□ -0.25
TSC2-226ENST00000569930 POLQO75417 2590 aa13.51□□□□□ -0.25
TSC2-226ENST00000569930 ZNF625Q96I27 306 aaPredicted RBP13.51□□□□□ -0.25
TSC2-226ENST00000569930 NDUFA1O15239 70 aa13.5□□□□□ -0.25
TSC2-226ENST00000569930 LINC01356Q8N9X3 169 aa13.5□□□□□ -0.25
TSC2-226ENST00000569930 SORL1Q92673 2214 aa13.5□□□□□ -0.25
TSC2-226ENST00000569930 A0A096LNT2 108 aa13.5□□□□□ -0.25
TSC2-226ENST00000569930 LINC00308Q8TCZ7 52 aa13.5□□□□□ -0.25
TSC2-226ENST00000569930 Q96MF0 132 aa13.5□□□□□ -0.25
TSC2-226ENST00000569930 ANKRD17O75179 2603 aaKnown RBP13.49□□□□□ -0.25
TSC2-226ENST00000569930 COX7A2LO14548 114 aa13.48□□□□□ -0.25
TSC2-226ENST00000569930 Q8N2B8 174 aa13.48□□□□□ -0.25
TSC2-226ENST00000569930 ABCA12Q86UK0 2595 aa13.48□□□□□ -0.25
TSC2-226ENST00000569930 PSMB8P28062 276 aa13.48□□□□□ -0.25
TSC2-226ENST00000569930 COX6A2Q02221 97 aa13.48□□□□□ -0.25
TSC2-226ENST00000569930 ACYP1P07311 99 aa13.47□□□□□ -0.25
TSC2-226ENST00000569930 SYNJ2BPP57105 145 aa13.47□□□□□ -0.25
TSC2-226ENST00000569930 Q9H8V8 135 aa13.47□□□□□ -0.25
TSC2-226ENST00000569930 NAV2Q8IVL1 2488 aa13.47□□□□□ -0.25
TSC2-226ENST00000569930 CIRBPQ14011 172 aaKnown RBP13.46□□□□□ -0.25
TSC2-226ENST00000569930 SOSTDC1Q6X4U4 206 aa13.46□□□□□ -0.25
TSC2-226ENST00000569930 TMEM126AQ9H061 195 aa13.46□□□□□ -0.25
TSC2-226ENST00000569930 DAZ2Q13117 558 aaKnown RBP13.45□□□□□ -0.26
TSC2-226ENST00000569930 DAZ4Q86SG3 579 aaKnown RBP13.45□□□□□ -0.26
TSC2-226ENST00000569930 IMUPQ9GZP8 106 aa13.45□□□□□ -0.26
TSC2-226ENST00000569930 DAZ3Q9NR90 486 aaKnown RBP13.45□□□□□ -0.26
TSC2-226ENST00000569930 IGLV5-45A0A087WSX0 123 aa13.45□□□□□ -0.26
TSC2-226ENST00000569930 MAP1AP78559 2803 aaPredicted RBP13.45□□□□□ -0.26
TSC2-226ENST00000569930 TIRAPP58753 221 aa13.44□□□□□ -0.26
TSC2-226ENST00000569930 RNF152Q8N8N0 203 aa13.44□□□□□ -0.26
TSC2-226ENST00000569930 APCP25054 2843 aa13.44□□□□□ -0.26
TSC2-226ENST00000569930 KRTAP1-3Q8IUG1 177 aa13.44□□□□□ -0.26
TSC2-226ENST00000569930 NACAE9PAV3 2078 aa13.44□□□□□ -0.26
TSC2-226ENST00000569930 NBPF19A0A087WUL8 3843 aa13.43□□□□□ -0.26
TSC2-226ENST00000569930 AVPP01185 164 aa13.43□□□□□ -0.26
TSC2-226ENST00000569930 IGHV4-31P0DP07 118 aa13.43□□□□□ -0.26
TSC2-226ENST00000569930 BEAN1Q3B7T3 259 aa13.43□□□□□ -0.26
TSC2-226ENST00000569930 LINC00643Q86TS7 51 aa13.43□□□□□ -0.26
TSC2-226ENST00000569930 IGHV3OR16-12A0A075B7B8 117 aa13.42□□□□□ -0.26
TSC2-226ENST00000569930 WFDC11Q8NEX6 87 aa13.42□□□□□ -0.26
TSC2-226ENST00000569930 DGAT2L7PQ6IED9 249 aa13.42□□□□□ -0.26
TSC2-226ENST00000569930 PPDPFQ9H3Y8 114 aa13.42□□□□□ -0.26
TSC2-226ENST00000569930 C22orf24Q9Y442 160 aa13.42□□□□□ -0.26
TSC2-226ENST00000569930 IGLV5-39A0A0G2JS06 123 aa13.41□□□□□ -0.26
TSC2-226ENST00000569930 RBMY1BA6NDE4 496 aaKnown RBP13.41□□□□□ -0.26
TSC2-226ENST00000569930 RBMY1EA6NEQ0 496 aaKnown RBP13.41□□□□□ -0.26
TSC2-226ENST00000569930 J3QLI3 93 aa13.41□□□□□ -0.26
TSC2-226ENST00000569930 RBMY1DP0C7P1 496 aaKnown RBP13.41□□□□□ -0.26
TSC2-226ENST00000569930 BAALC-AS2P0C853 105 aa13.41□□□□□ -0.26
TSC2-226ENST00000569930 VPREB3Q9UKI3 123 aa13.41□□□□□ -0.26
TSC2-226ENST00000569930 C9orf153Q5TBE3 101 aa13.41□□□□□ -0.26
TSC2-226ENST00000569930 FAM218AQ96MZ4 157 aa13.41□□□□□ -0.26
TSC2-226ENST00000569930 GCN1Q92616 2671 aaKnown RBP13.4□□□□□ -0.26
TSC2-226ENST00000569930 NDUFA7O95182 113 aa13.4□□□□□ -0.26
TSC2-226ENST00000569930 DEFB131AP59861 70 aa13.4□□□□□ -0.26
TSC2-226ENST00000569930 LINC00242Q5T6M2 205 aa13.4□□□□□ -0.26
TSC2-226ENST00000569930 C3orf22Q8N5N4 141 aa13.4□□□□□ -0.26
TSC2-226ENST00000569930 ZNF415Q09FC8 603 aa13.39□□□□□ -0.27
TSC2-226ENST00000569930 IGHV3-53P01767 116 aa13.38□□□□□ -0.27
TSC2-226ENST00000569930 TRACP01848 142 aa13.38□□□□□ -0.27
TSC2-226ENST00000569930 SMIM1B2RUZ4 78 aa13.38□□□□□ -0.27
TSC2-226ENST00000569930 IGHV4-59P01825 116 aa13.38□□□□□ -0.27
TSC2-226ENST00000569930 LINC00694P0DN24 101 aa13.38□□□□□ -0.27
TSC2-226ENST00000569930 SDIM1Q6ZPB5 146 aa13.38□□□□□ -0.27
TSC2-226ENST00000569930 HERVK_113P63121 156 aa13.37□□□□□ -0.27
TSC2-226ENST00000569930 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.37□□□□□ -0.273e-7■■□□□ 13.6
TSC2-226ENST00000569930 HOXD3P31249 432 aaPredicted RBP13.37□□□□□ -0.27
TSC2-226ENST00000569930 PRIMA1Q86XR5 153 aa13.36□□□□□ -0.27
TSC2-226ENST00000569930 DNAJC30Q96LL9 226 aa13.36□□□□□ -0.27
TSC2-226ENST00000569930 PIK3CD-AS1Q5SR53 167 aa13.36□□□□□ -0.27
TSC2-226ENST00000569930 PEMTQ9UBM1 199 aa13.36□□□□□ -0.27
TSC2-226ENST00000569930 Q9HAA7 133 aa13.35□□□□□ -0.27
TSC2-226ENST00000569930 TRAV13-1A0A0B4J241 112 aa13.35□□□□□ -0.27
TSC2-226ENST00000569930 UQCRQO14949 82 aa13.35□□□□□ -0.27
TSC2-226ENST00000569930 GAGE2AQ6NT46 116 aa13.35□□□□□ -0.27
TSC2-226ENST00000569930 KLK5Q9Y337 293 aaPredicted RBP13.35□□□□□ -0.27
TSC2-226ENST00000569930 C11orf72Q8NBR9 251 aa13.34□□□□□ -0.27
TSC2-226ENST00000569930 FASNP49327 2511 aaKnown RBP13.34□□□□□ -0.27
TSC2-226ENST00000569930 C5orf38Q86SI9 138 aa13.34□□□□□ -0.27
TSC2-226ENST00000569930 TMEM89A2RUT3 159 aa13.33□□□□□ -0.28
TSC2-226ENST00000569930 LINC00526Q96FQ7 95 aa13.33□□□□□ -0.28
TSC2-226ENST00000569930 COPS9Q8WXC6 57 aa13.33□□□□□ -0.28
TSC2-226ENST00000569930 CR1P17927 2039 aa13.32□□□□□ -0.28
TSC2-226ENST00000569930 DEFB112Q30KQ8 113 aa13.32□□□□□ -0.28
TSC2-226ENST00000569930 A8MTW9 85 aa13.31□□□□□ -0.28
TSC2-226ENST00000569930 RS1O15537 224 aa13.31□□□□□ -0.28
TSC2-226ENST00000569930 CXCL5P42830 114 aa13.31□□□□□ -0.28
TSC2-226ENST00000569930 FAM222AQ5U5X8 452 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms