RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 GTSF1LQ9H1H1 148 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 DAZ3Q9NR90 486 aaKnown RBP3.84□□□□□ -1.79
SF3B3-213ENST00000569687 UBE2D4Q9Y2X8 147 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 IGHV3OR16-12A0A075B7B8 117 aa3.83□□□□□ -1.8
SF3B3-213ENST00000569687 A0A0J9YXV3 536 aa3.83□□□□□ -1.8
SF3B3-213ENST00000569687 A0A0J9YY99 117 aa3.83□□□□□ -1.8
SF3B3-213ENST00000569687 TINCRA0A1B0GVN0 87 aa3.83□□□□□ -1.8
SF3B3-213ENST00000569687 ZNF815PA8K554 130 aa3.83□□□□□ -1.8
SF3B3-213ENST00000569687 H7C423 109 aa3.83□□□□□ -1.8
SF3B3-213ENST00000569687 J3QQQ9 107 aa3.83□□□□□ -1.8
SF3B3-213ENST00000569687 K7EP13 123 aa3.83□□□□□ -1.8
SF3B3-213ENST00000569687 K7EQD1 137 aa3.83□□□□□ -1.8
SF3B3-213ENST00000569687 ZNF22P17026 224 aaPredicted RBP3.83□□□□□ -1.8
SF3B3-213ENST00000569687 RPL35AP18077 110 aaKnown RBP3.83□□□□□ -1.8
SF3B3-213ENST00000569687 FXYD2P54710 66 aa3.83□□□□□ -1.8
SF3B3-213ENST00000569687 RPL36AP83881 106 aaKnown RBP3.83□□□□□ -1.8
SF3B3-213ENST00000569687 C12orf74Q32Q52 190 aa3.83□□□□□ -1.8
SF3B3-213ENST00000569687 AMMECR1LQ6DCA0 310 aa3.83□□□□□ -1.8
SF3B3-213ENST00000569687 SBSPONQ8IVN8 264 aa3.83□□□□□ -1.8
SF3B3-213ENST00000569687 DEFB104AQ8WTQ1 72 aa3.83□□□□□ -1.8
SF3B3-213ENST00000569687 RPL36ALQ969Q0 106 aaKnown RBP3.83□□□□□ -1.8
SF3B3-213ENST00000569687 PLEKHB2Q96CS7 222 aa3.83□□□□□ -1.8
SF3B3-213ENST00000569687 CITED1Q99966 193 aa3.83□□□□□ -1.8
SF3B3-213ENST00000569687 NOP10Q9NPE3 64 aaKnown RBP3.83□□□□□ -1.8
SF3B3-213ENST00000569687 SPANXB1Q9NS25 103 aaPredicted RBP3.83□□□□□ -1.8
SF3B3-213ENST00000569687 SETD2Q9BYW2 2564 aaPredicted RBP3.82□□□□□ -1.8
SF3B3-213ENST00000569687 F8P00451 2351 aa3.82□□□□□ -1.8
SF3B3-213ENST00000569687 IGLV5-45A0A087WSX0 123 aa3.82□□□□□ -1.8
SF3B3-213ENST00000569687 A8MZ25 164 aa3.82□□□□□ -1.8
SF3B3-213ENST00000569687 FHL2Q14192 279 aa3.82□□□□□ -1.8
SF3B3-213ENST00000569687 TMEM170BQ5T4T1 132 aa3.82□□□□□ -1.8
SF3B3-213ENST00000569687 NTM-AS1Q6ZSK4 140 aa3.82□□□□□ -1.8
SF3B3-213ENST00000569687 GTF2H5Q6ZYL4 71 aa3.82□□□□□ -1.8
SF3B3-213ENST00000569687 HIST1H4GQ99525 98 aa3.82□□□□□ -1.8
SF3B3-213ENST00000569687 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.82□□□□□ -1.8
SF3B3-213ENST00000569687 WNK1Q9H4A3 2382 aa3.82□□□□□ -1.8
SF3B3-213ENST00000569687 TRRAPQ9Y4A5 3859 aa3.81□□□□□ -1.8
SF3B3-213ENST00000569687 IGHV1-58A0A0C4DH39 117 aa3.81□□□□□ -1.8
SF3B3-213ENST00000569687 A0A1W2PPM0 123 aa3.81□□□□□ -1.8
SF3B3-213ENST00000569687 IGLL5B9A064 214 aa3.81□□□□□ -1.8
SF3B3-213ENST00000569687 H3BUT2 72 aa3.81□□□□□ -1.8
SF3B3-213ENST00000569687 LGALS3P17931 250 aaKnown RBP3.81□□□□□ -1.8
SF3B3-213ENST00000569687 UBE2D1P51668 147 aa3.81□□□□□ -1.8
SF3B3-213ENST00000569687 EMP1P54849 157 aa3.81□□□□□ -1.8
SF3B3-213ENST00000569687 TSPEAR-AS2P59090 65 aa3.81□□□□□ -1.8
SF3B3-213ENST00000569687 KRTAP24-1Q3LI83 254 aa3.81□□□□□ -1.8
SF3B3-213ENST00000569687 PRIMA1Q86XR5 153 aa3.81□□□□□ -1.8
SF3B3-213ENST00000569687 WFDC10AQ9H1F0 79 aa3.81□□□□□ -1.8
SF3B3-213ENST00000569687 DNAH3Q8TD57 4116 aa3.8□□□□□ -1.8
SF3B3-213ENST00000569687 NACAE9PAV3 2078 aa3.8□□□□□ -1.8
SF3B3-213ENST00000569687 TRGV2A0A075B6R0 118 aa3.8□□□□□ -1.8
SF3B3-213ENST00000569687 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.8□□□□□ -1.8
SF3B3-213ENST00000569687 IGHV3-38A0A0C4DH36 116 aa3.8□□□□□ -1.8
SF3B3-213ENST00000569687 GAGE12BA1L429 117 aa3.8□□□□□ -1.8
SF3B3-213ENST00000569687 IGKV2-29A2NJV5 120 aaPredicted RBP3.8□□□□□ -1.8
SF3B3-213ENST00000569687 K7EP34 96 aa3.8□□□□□ -1.8
SF3B3-213ENST00000569687 GAGE7O76087 117 aa3.8□□□□□ -1.8
SF3B3-213ENST00000569687 IGHV3-30P01768 117 aa3.8□□□□□ -1.8
SF3B3-213ENST00000569687 GAGE12FP0CL80 117 aa3.8□□□□□ -1.8
SF3B3-213ENST00000569687 GAGE12GP0CL81 117 aa3.8□□□□□ -1.8
SF3B3-213ENST00000569687 GAGE12IP0CL82 117 aa3.8□□□□□ -1.8
SF3B3-213ENST00000569687 LINC00694P0DN24 101 aa3.8□□□□□ -1.8
SF3B3-213ENST00000569687 IGHV3-30-3P0DP02 117 aa3.8□□□□□ -1.8
SF3B3-213ENST00000569687 IGHV3-30-5P0DP03 117 aa3.8□□□□□ -1.8
SF3B3-213ENST00000569687 FABP2P12104 132 aa3.8□□□□□ -1.8
SF3B3-213ENST00000569687 SRSF9Q13242 221 aaKnown RBP eCLIP3.8□□□□□ -1.8
SF3B3-213ENST00000569687 CEMP1Q6PRD7 247 aaPredicted RBP3.8□□□□□ -1.8
SF3B3-213ENST00000569687 SCGB1D4Q6XE38 83 aa3.8□□□□□ -1.8
SF3B3-213ENST00000569687 RNF183Q96D59 192 aa3.8□□□□□ -1.8
SF3B3-213ENST00000569687 VSIG2Q96IQ7 327 aa3.8□□□□□ -1.8
SF3B3-213ENST00000569687 CDC42SE2Q9NRR3 84 aa3.8□□□□□ -1.8
SF3B3-213ENST00000569687 NHP2Q9NX24 153 aaKnown RBP3.8□□□□□ -1.8
SF3B3-213ENST00000569687 FBN1P35555 2871 aaKnown RBP3.79□□□□□ -1.8
SF3B3-213ENST00000569687 TRGV4A0A0C4DH28 118 aa3.79□□□□□ -1.8
SF3B3-213ENST00000569687 IGLV5-39A0A0G2JS06 123 aa3.79□□□□□ -1.8
SF3B3-213ENST00000569687 A0A0J9YXY3 114 aa3.79□□□□□ -1.8
SF3B3-213ENST00000569687 GAGE12JA6NER3 117 aa3.79□□□□□ -1.8
SF3B3-213ENST00000569687 LYRM9A8MSI8 78 aa3.79□□□□□ -1.8
SF3B3-213ENST00000569687 TIMM17BO60830 172 aa3.79□□□□□ -1.8
SF3B3-213ENST00000569687 APOC4P55056 127 aa3.79□□□□□ -1.8
SF3B3-213ENST00000569687 HERVK_113P63121 156 aa3.79□□□□□ -1.8
SF3B3-213ENST00000569687 GAGE4Q13068 117 aa3.79□□□□□ -1.8
SF3B3-213ENST00000569687 GAGE5Q13069 117 aa3.79□□□□□ -1.8
SF3B3-213ENST00000569687 Q6ZUT4 128 aa3.79□□□□□ -1.8
SF3B3-213ENST00000569687 SPATA3Q8NHX4 192 aa3.79□□□□□ -1.8
SF3B3-213ENST00000569687 RAB37Q96AX2 223 aa3.79□□□□□ -1.8
SF3B3-213ENST00000569687 TMEM243Q9BU79 118 aa3.79□□□□□ -1.8
SF3B3-213ENST00000569687 GEMIN7Q9H840 131 aaKnown RBP3.79□□□□□ -1.8
SF3B3-213ENST00000569687 C2CD3Q4AC94 2353 aa3.78□□□□□ -1.8
SF3B3-213ENST00000569687 COX6A2Q02221 97 aa3.78□□□□□ -1.8
SF3B3-213ENST00000569687 LINC00242Q5T6M2 205 aa3.78□□□□□ -1.8
SF3B3-213ENST00000569687 SERTAD4-AS1Q5TG53 156 aa3.78□□□□□ -1.8
SF3B3-213ENST00000569687 ZFAND6Q6FIF0 208 aa3.78□□□□□ -1.8
SF3B3-213ENST00000569687 C10orf126Q8N4M7 172 aa3.78□□□□□ -1.8
SF3B3-213ENST00000569687 TMEM101Q96IK0 257 aa3.78□□□□□ -1.8
SF3B3-213ENST00000569687 LITAFQ99732 161 aa3.78□□□□□ -1.8
SF3B3-213ENST00000569687 PPDPFQ9H3Y8 114 aa3.78□□□□□ -1.8
SF3B3-213ENST00000569687 CDKN2A-AS1Q9UH64 79 aa3.78□□□□□ -1.8
SF3B3-213ENST00000569687 NDUFA12Q9UI09 145 aa3.78□□□□□ -1.8
SF3B3-213ENST00000569687 SPCS1Q9Y6A9 102 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms