RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 NFE4Q86UQ8 179 aa14.98□□□□□ -0.01
SCRT1-201ENST00000569446 TRBV7-9A0A0J9YWB2 115 aa14.98□□□□□ -0.01
SCRT1-201ENST00000569446 PLA2G2AP14555 144 aa14.98□□□□□ -0.01
SCRT1-201ENST00000569446 TRAV8-4A0A0B4J246 113 aa14.98□□□□□ -0.01
SCRT1-201ENST00000569446 CCL24O00175 119 aa14.97□□□□□ -0.01
SCRT1-201ENST00000569446 TEX49A0A1B0GTD5 131 aa14.97□□□□□ -0.01
SCRT1-201ENST00000569446 DEFB4AO15263 64 aa14.97□□□□□ -0.01
SCRT1-201ENST00000569446 TEN1Q86WV5 123 aa14.97□□□□□ -0.01
SCRT1-201ENST00000569446 CITED2Q99967 270 aaPredicted RBP14.97□□□□□ -0.01
SCRT1-201ENST00000569446 ZNF702PQ9H963 129 aa14.97□□□□□ -0.01
SCRT1-201ENST00000569446 GAGE2BQ13066 116 aa14.96□□□□□ -0.01
SCRT1-201ENST00000569446 GAGE2EQ4V326 116 aa14.96□□□□□ -0.01
SCRT1-201ENST00000569446 C9orf85Q96MD7 179 aa14.96□□□□□ -0.01
SCRT1-201ENST00000569446 GAGE2DQ9UEU5 116 aa14.96□□□□□ -0.01
SCRT1-201ENST00000569446 TMEM223A0PJW6 202 aa14.96□□□□□ -0.02
SCRT1-201ENST00000569446 IGHV4-31P0DP07 118 aa14.96□□□□□ -0.02
SCRT1-201ENST00000569446 C5orf38Q86SI9 138 aa14.96□□□□□ -0.02
SCRT1-201ENST00000569446 NIPBLQ6KC79 2804 aaeCLIP14.96□□□□□ -0.02
SCRT1-201ENST00000569446 CARD19Q96LW7 228 aa14.95□□□□□ -0.02
SCRT1-201ENST00000569446 UBR5O95071 2799 aaPredicted RBP14.94□□□□□ -0.02
SCRT1-201ENST00000569446 NXPH4O95158 308 aa14.94□□□□□ -0.02
SCRT1-201ENST00000569446 DEFB113Q30KQ7 82 aa14.94□□□□□ -0.02
SCRT1-201ENST00000569446 PRSS47A8MTI9 375 aa14.93□□□□□ -0.02
SCRT1-201ENST00000569446 PAX4O43316 350 aa14.93□□□□□ -0.02
SCRT1-201ENST00000569446 CFAP126Q5VTH2 177 aa14.93□□□□□ -0.02
SCRT1-201ENST00000569446 C3orf56Q8N813 242 aa14.93□□□□□ -0.02
SCRT1-201ENST00000569446 ITPR2Q14571 2701 aa14.93□□□□□ -0.02
SCRT1-201ENST00000569446 ZFAND6Q6FIF0 208 aa14.93□□□□□ -0.02
SCRT1-201ENST00000569446 LINC01620Q4KN68 170 aa14.92□□□□□ -0.02
SCRT1-201ENST00000569446 LOC100131303A0A0U1RQF7 123 aa14.92□□□□□ -0.02
SCRT1-201ENST00000569446 Q6YL49 198 aa14.92□□□□□ -0.02
SCRT1-201ENST00000569446 DNAL4O96015 105 aa14.91□□□□□ -0.02
SCRT1-201ENST00000569446 IGHV3-33P01772 117 aa14.91□□□□□ -0.02
SCRT1-201ENST00000569446 ADAMTSL4-AS1Q5T5F5 129 aa14.91□□□□□ -0.02
SCRT1-201ENST00000569446 BBC3Q96PG8 261 aaPredicted RBP14.91□□□□□ -0.02
SCRT1-201ENST00000569446 TRIAP1O43715 76 aa14.9□□□□□ -0.02
SCRT1-201ENST00000569446 J3QLI3 93 aa14.9□□□□□ -0.02
SCRT1-201ENST00000569446 RBMY1BA6NDE4 496 aaKnown RBP14.9□□□□□ -0.02
SCRT1-201ENST00000569446 RBMY1EA6NEQ0 496 aaKnown RBP14.9□□□□□ -0.02
SCRT1-201ENST00000569446 RBMY1DP0C7P1 496 aaKnown RBP14.9□□□□□ -0.02
SCRT1-201ENST00000569446 DEFB114Q30KQ6 69 aa14.9□□□□□ -0.02
SCRT1-201ENST00000569446 UBE2WQ96B02 151 aa14.9□□□□□ -0.02
SCRT1-201ENST00000569446 IGHV1-58A0A0C4DH39 117 aa14.89□□□□□ -0.03
SCRT1-201ENST00000569446 CRLF1O75462 422 aa14.89□□□□□ -0.03
SCRT1-201ENST00000569446 POM121L12Q8N7R1 296 aa14.89□□□□□ -0.03
SCRT1-201ENST00000569446 UBE2D1P51668 147 aa14.89□□□□□ -0.03
SCRT1-201ENST00000569446 ICOSQ9Y6W8 199 aa14.89□□□□□ -0.03
SCRT1-201ENST00000569446 XGP55808 180 aa14.88□□□□□ -0.03
SCRT1-201ENST00000569446 PIK3CD-AS1Q5SR53 167 aa14.88□□□□□ -0.03
SCRT1-201ENST00000569446 VPS13CQ709C8 3753 aa14.88□□□□□ -0.03
SCRT1-201ENST00000569446 XCL1P47992 114 aa14.87□□□□□ -0.03
SCRT1-201ENST00000569446 SMCPP49901 116 aaPredicted RBP14.87□□□□□ -0.03
SCRT1-201ENST00000569446 IGLV10-54A0A075B6I4 117 aa14.87□□□□□ -0.03
SCRT1-201ENST00000569446 LINC01546A6NGU7 62 aa14.87□□□□□ -0.03
SCRT1-201ENST00000569446 C6orf226Q5I0X4 101 aa14.87□□□□□ -0.03
SCRT1-201ENST00000569446 TRBV6-5A0A0K0K1A5 114 aa14.86□□□□□ -0.03
SCRT1-201ENST00000569446 LINC00694P0DN24 101 aa14.86□□□□□ -0.03
SCRT1-201ENST00000569446 VSIG2Q96IQ7 327 aa14.86□□□□□ -0.03
SCRT1-201ENST00000569446 SETXQ7Z333 2677 aaKnown RBP14.86□□□□□ -0.03
SCRT1-201ENST00000569446 TEP1Q99973 2627 aaKnown RBP14.86□□□□□ -0.03
SCRT1-201ENST00000569446 TRAV26-1A0A087WT03 109 aa14.85□□□□□ -0.03
SCRT1-201ENST00000569446 C15orf53Q8NAA6 179 aa14.85□□□□□ -0.03
SCRT1-201ENST00000569446 TMEM243Q9BU79 118 aa14.85□□□□□ -0.03
SCRT1-201ENST00000569446 DNAJC9-AS1A6NH13 148 aa14.85□□□□□ -0.03
SCRT1-201ENST00000569446 FAM19A4Q96LR4 140 aa14.85□□□□□ -0.03
SCRT1-201ENST00000569446 Q9HAA7 133 aa14.84□□□□□ -0.03
SCRT1-201ENST00000569446 SPANXA1Q9NS26 97 aa14.84□□□□□ -0.03
SCRT1-201ENST00000569446 COX6A2Q02221 97 aa14.83□□□□□ -0.04
SCRT1-201ENST00000569446 ZFHX3Q15911 3703 aa14.82□□□□□ -0.04
SCRT1-201ENST00000569446 B5MCH6 92 aa14.82□□□□□ -0.04
SCRT1-201ENST00000569446 CRPP02741 224 aa14.82□□□□□ -0.04
SCRT1-201ENST00000569446 GAGE2AQ6NT46 116 aa14.82□□□□□ -0.04
SCRT1-201ENST00000569446 ODF3L2Q3SX64 289 aa14.81□□□□□ -0.04
SCRT1-201ENST00000569446 F8P00451 2351 aa14.81□□□□□ -0.04
SCRT1-201ENST00000569446 UBE2D4Q9Y2X8 147 aa14.81□□□□□ -0.04
SCRT1-201ENST00000569446 TMEM89A2RUT3 159 aa14.8□□□□□ -0.04
SCRT1-201ENST00000569446 HERVK_113P63121 156 aa14.8□□□□□ -0.04
SCRT1-201ENST00000569446 K7EQD1 137 aa14.8□□□□□ -0.04
SCRT1-201ENST00000569446 CRYBA4P53673 196 aa14.79□□□□□ -0.04
SCRT1-201ENST00000569446 C4orf3Q8WVX3 66 aa14.79□□□□□ -0.04
SCRT1-201ENST00000569446 SMR3AQ99954 134 aa14.79□□□□□ -0.04
SCRT1-201ENST00000569446 TMEM263Q8WUH6 116 aaKnown RBP14.78□□□□□ -0.04
SCRT1-201ENST00000569446 RNF183Q96D59 192 aa14.78□□□□□ -0.04
SCRT1-201ENST00000569446 PRO0461Q9UI25 63 aa14.78□□□□□ -0.04
SCRT1-201ENST00000569446 MIAQ16674 131 aa14.77□□□□□ -0.04
SCRT1-201ENST00000569446 SS18L2Q9UHA2 77 aa14.77□□□□□ -0.04
SCRT1-201ENST00000569446 EIF4EBP3O60516 100 aaPredicted RBP14.77□□□□□ -0.05
SCRT1-201ENST00000569446 ATP5G1P05496 136 aa14.77□□□□□ -0.05
SCRT1-201ENST00000569446 ODF3Q96PU9 254 aa14.77□□□□□ -0.05
SCRT1-201ENST00000569446 UBE2D3P61077 147 aa14.76□□□□□ -0.05
SCRT1-201ENST00000569446 UBE2D2P62837 147 aa14.76□□□□□ -0.05
SCRT1-201ENST00000569446 MIR7-3HGQ8N6C7 128 aa14.76□□□□□ -0.05
SCRT1-201ENST00000569446 CHCHD7Q9BUK0 85 aa14.76□□□□□ -0.05
SCRT1-201ENST00000569446 TRAV4A0A0B4J268 109 aa14.74□□□□□ -0.05
SCRT1-201ENST00000569446 TINCRA0A1B0GVN0 87 aa14.74□□□□□ -0.05
SCRT1-201ENST00000569446 MALP21145 153 aa14.74□□□□□ -0.05
SCRT1-201ENST00000569446 ZNF843Q8N446 348 aa14.74□□□□□ -0.05
SCRT1-201ENST00000569446 RPL32P62910 135 aaKnown RBP14.73□□□□□ -0.05
SCRT1-201ENST00000569446 MRPS36P82909 103 aaKnown RBP14.73□□□□□ -0.05
SCRT1-201ENST00000569446 C1orf158Q8N1D5 194 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms