RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 C20orf78Q9BR46 151 aa8.65□□□□□ -1.02
COMMD4-214ENST00000566230 CRPP02741 224 aa8.64□□□□□ -1.03
COMMD4-214ENST00000566230 APCSP02743 223 aa8.64□□□□□ -1.03
COMMD4-214ENST00000566230 SUMO2P61956 95 aaKnown RBP8.64□□□□□ -1.03
COMMD4-214ENST00000566230 NRACQ8N912 160 aa8.64□□□□□ -1.03
COMMD4-214ENST00000566230 PRR34Q9NV39 138 aa8.64□□□□□ -1.03
COMMD4-214ENST00000566230 TRAV9-1A0A075B6T8 112 aa8.63□□□□□ -1.03
COMMD4-214ENST00000566230 SMKR1H3BMG3 65 aa8.63□□□□□ -1.03
COMMD4-214ENST00000566230 PHOX2AO14813 284 aa8.63□□□□□ -1.03
COMMD4-214ENST00000566230 LINC00269Q8N2A0 174 aa8.63□□□□□ -1.03
COMMD4-214ENST00000566230 C1orf43Q9BWL3 253 aa8.63□□□□□ -1.03
COMMD4-214ENST00000566230 TRAV8-4A0A0B4J246 113 aa8.62□□□□□ -1.03
COMMD4-214ENST00000566230 TCAPO15273 167 aa8.62□□□□□ -1.03
COMMD4-214ENST00000566230 TNFRSF6BO95407 300 aa8.62□□□□□ -1.03
COMMD4-214ENST00000566230 ESDP10768 282 aa8.62□□□□□ -1.03
COMMD4-214ENST00000566230 RPL32P62910 135 aaKnown RBP8.62□□□□□ -1.03
COMMD4-214ENST00000566230 C20orf203Q8NBC4 194 aa8.62□□□□□ -1.03
COMMD4-214ENST00000566230 KIR2DL4Q99706 377 aa8.62□□□□□ -1.03
COMMD4-214ENST00000566230 CARHSP1Q9Y2V2 147 aaKnown RBP8.62□□□□□ -1.03
COMMD4-214ENST00000566230 D6R8Y8 96 aa8.61□□□□□ -1.03
COMMD4-214ENST00000566230 TSHBP01222 138 aa8.61□□□□□ -1.03
COMMD4-214ENST00000566230 ZNF25P17030 456 aaPredicted RBP8.61□□□□□ -1.03
COMMD4-214ENST00000566230 REG3AQ06141 175 aa8.61□□□□□ -1.03
COMMD4-214ENST00000566230 AMMECR1LQ6DCA0 310 aa8.61□□□□□ -1.03
COMMD4-214ENST00000566230 TMEM136Q6ZRR5 245 aa8.61□□□□□ -1.03
COMMD4-214ENST00000566230 ORMDL3Q8N138 153 aa8.61□□□□□ -1.03
COMMD4-214ENST00000566230 TNXBP22105 4242 aa8.6□□□□□ -1.03
COMMD4-214ENST00000566230 IGLV4-60A0A075B6I1 120 aa8.6□□□□□ -1.03
COMMD4-214ENST00000566230 C7orf77A4D0Y5 90 aa8.6□□□□□ -1.03
COMMD4-214ENST00000566230 S100PP25815 95 aa8.6□□□□□ -1.03
COMMD4-214ENST00000566230 FCER1GP30273 86 aa8.6□□□□□ -1.03
COMMD4-214ENST00000566230 SMAGPQ0VAQ4 97 aa8.6□□□□□ -1.03
COMMD4-214ENST00000566230 C14orf177Q52M58 125 aa8.6□□□□□ -1.03
COMMD4-214ENST00000566230 LAMTOR2Q9Y2Q5 125 aa8.6□□□□□ -1.03
COMMD4-214ENST00000566230 PRSS47A8MTI9 375 aa8.59□□□□□ -1.03
COMMD4-214ENST00000566230 PANO1I0J062 215 aa8.59□□□□□ -1.03
COMMD4-214ENST00000566230 FGF6P10767 208 aa8.59□□□□□ -1.03
COMMD4-214ENST00000566230 RHEBQ15382 184 aa8.59□□□□□ -1.03
COMMD4-214ENST00000566230 RNASEKQ6P5S7 137 aaKnown RBP8.59□□□□□ -1.03
COMMD4-214ENST00000566230 CLRN3Q8NCR9 226 aa8.59□□□□□ -1.03
COMMD4-214ENST00000566230 TMEM101Q96IK0 257 aa8.59□□□□□ -1.03
COMMD4-214ENST00000566230 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.59□□□□□ -1.03
COMMD4-214ENST00000566230 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.58□□□□□ -1.04
COMMD4-214ENST00000566230 IGKV2-29A2NJV5 120 aaPredicted RBP8.58□□□□□ -1.04
COMMD4-214ENST00000566230 USP17L23D6RBM5 183 aa8.58□□□□□ -1.04
COMMD4-214ENST00000566230 PRSS1P07477 247 aa8.58□□□□□ -1.04
COMMD4-214ENST00000566230 NDUFA5Q16718 116 aa8.58□□□□□ -1.04
COMMD4-214ENST00000566230 TMEM18Q96B42 140 aa8.58□□□□□ -1.04
COMMD4-214ENST00000566230 PRELID3AQ96N28 172 aa8.58□□□□□ -1.04
COMMD4-214ENST00000566230 RPS10P5Q9NQ39 176 aa8.58□□□□□ -1.04
COMMD4-214ENST00000566230 COX19Q49B96 90 aa8.57□□□□□ -1.04
COMMD4-214ENST00000566230 MRPL52Q86TS9 123 aaKnown RBP8.57□□□□□ -1.04
COMMD4-214ENST00000566230 C9orf163Q8N9P6 203 aa8.57□□□□□ -1.04
COMMD4-214ENST00000566230 CSDC2Q9Y534 153 aaKnown RBP8.57□□□□□ -1.04
COMMD4-214ENST00000566230 SNAPINO95295 136 aa8.56□□□□□ -1.04
COMMD4-214ENST00000566230 NPYP01303 97 aa8.56□□□□□ -1.04
COMMD4-214ENST00000566230 APOC3P02656 99 aa8.56□□□□□ -1.04
COMMD4-214ENST00000566230 DGAT2L7PQ6IED9 249 aa8.56□□□□□ -1.04
COMMD4-214ENST00000566230 KRTAP26-1Q6PEX3 210 aa8.56□□□□□ -1.04
COMMD4-214ENST00000566230 Q6ZRU5 148 aa8.56□□□□□ -1.04
COMMD4-214ENST00000566230 SVBPQ8N300 66 aa8.56□□□□□ -1.04
COMMD4-214ENST00000566230 OR5A1Q8NGJ0 315 aa8.56□□□□□ -1.04
COMMD4-214ENST00000566230 SMIM2Q9BVW6 85 aa8.56□□□□□ -1.04
COMMD4-214ENST00000566230 RAB5AP20339 215 aa8.55□□□□□ -1.04
COMMD4-214ENST00000566230 CLPSL2Q6UWE3 100 aa8.55□□□□□ -1.04
COMMD4-214ENST00000566230 SDIM1Q6ZPB5 146 aa8.55□□□□□ -1.04
COMMD4-214ENST00000566230 GNB1LQ9BYB4 327 aa8.55□□□□□ -1.04
COMMD4-214ENST00000566230 CDC42SE2Q9NRR3 84 aa8.55□□□□□ -1.04
COMMD4-214ENST00000566230 HLA-DQA1P01909 254 aa8.54□□□□□ -1.04
COMMD4-214ENST00000566230 ZNF664Q8N3J9 261 aa8.54□□□□□ -1.04
COMMD4-214ENST00000566230 TIMM21Q9BVV7 248 aa8.54□□□□□ -1.04
COMMD4-214ENST00000566230 MAP1LC3AQ9H492 121 aa8.54□□□□□ -1.04
COMMD4-214ENST00000566230 IGLV10-54A0A075B6I4 117 aa8.53□□□□□ -1.04
COMMD4-214ENST00000566230 K7EMI3 77 aa8.53□□□□□ -1.04
COMMD4-214ENST00000566230 CCL25O15444 150 aa8.53□□□□□ -1.04
COMMD4-214ENST00000566230 UBE2D4Q9Y2X8 147 aa8.53□□□□□ -1.04
COMMD4-214ENST00000566230 CIRBPQ14011 172 aaKnown RBP8.52□□□□□ -1.05
COMMD4-214ENST00000566230 Q8N8P6 123 aa8.52□□□□□ -1.05
COMMD4-214ENST00000566230 IGKV3OR2-268A0A0C4DH90 116 aa8.51□□□□□ -1.05
COMMD4-214ENST00000566230 LOC389332A0A1B0GUA5 103 aa8.51□□□□□ -1.05
COMMD4-214ENST00000566230 LINC00959A0A1B0GUT2 108 aa8.51□□□□□ -1.05
COMMD4-214ENST00000566230 MT-ND6P03923 174 aa8.51□□□□□ -1.05
COMMD4-214ENST00000566230 G0S2P27469 103 aa8.51□□□□□ -1.05
COMMD4-214ENST00000566230 SS18Q15532 418 aa8.51□□□□□ -1.05
COMMD4-214ENST00000566230 CFAP161Q6P656 301 aa8.51□□□□□ -1.05
COMMD4-214ENST00000566230 CHCHD10Q8WYQ3 142 aaPredicted RBP8.5□□□□□ -1.05
COMMD4-214ENST00000566230 NXT2Q9NPJ8 142 aaKnown RBP8.5□□□□□ -1.05
COMMD4-214ENST00000566230 GAGE12HA6NDE8 117 aa8.49□□□□□ -1.05
COMMD4-214ENST00000566230 C1orf196B1AJZ1 125 aa8.49□□□□□ -1.05
COMMD4-214ENST00000566230 ODF1Q14990 250 aa8.49□□□□□ -1.05
COMMD4-214ENST00000566230 KIAA1644Q3SXP7 199 aa8.49□□□□□ -1.05
COMMD4-214ENST00000566230 ORMDL2Q53FV1 153 aa8.49□□□□□ -1.05
COMMD4-214ENST00000566230 SPANXA1Q9NS26 97 aa8.49□□□□□ -1.05
COMMD4-214ENST00000566230 PYGO1Q9Y3Y4 419 aa8.49□□□□□ -1.05
COMMD4-214ENST00000566230 RPL39P62891 51 aaKnown RBP8.48□□□□□ -1.05
COMMD4-214ENST00000566230 MRPS36P82909 103 aaKnown RBP8.48□□□□□ -1.05
COMMD4-214ENST00000566230 CD164L2Q6UWJ8 174 aa8.48□□□□□ -1.05
COMMD4-214ENST00000566230 IFI27P40305 119 aaPredicted RBP8.47□□□□□ -1.05
COMMD4-214ENST00000566230 FABP9Q0Z7S8 132 aa8.47□□□□□ -1.05
COMMD4-214ENST00000566230 SLC7A5P1Q8MH63 180 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms