RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 RAB37Q96AX2 223 aa2.96□□□□□ -1.94
LINC00561-201ENST00000565815 HIST1H4GQ99525 98 aa2.96□□□□□ -1.94
LINC00561-201ENST00000565815 DPH3P1Q9H4G8 78 aa2.96□□□□□ -1.94
LINC00561-201ENST00000565815 NHP2Q9NX24 153 aaKnown RBP2.96□□□□□ -1.94
LINC00561-201ENST00000565815 SMAD5-AS1Q9Y6J3 95 aa2.96□□□□□ -1.94
LINC00561-201ENST00000565815 TMSB15BA0A087X1C1 80 aa2.95□□□□□ -1.94
LINC00561-201ENST00000565815 TRAV21A0A0B4J279 112 aa2.95□□□□□ -1.94
LINC00561-201ENST00000565815 TMEM262E9PQX1 116 aa2.95□□□□□ -1.94
LINC00561-201ENST00000565815 H3BUA1 57 aa2.95□□□□□ -1.94
LINC00561-201ENST00000565815 IGF1P05019 195 aa2.95□□□□□ -1.94
LINC00561-201ENST00000565815 ERCC8Q13216 396 aa2.95□□□□□ -1.94
LINC00561-201ENST00000565815 KLRD1Q13241 179 aa2.95□□□□□ -1.94
LINC00561-201ENST00000565815 SPANXN1Q5VSR9 72 aa2.95□□□□□ -1.94
LINC00561-201ENST00000565815 APRG1Q8IVJ8 170 aa2.95□□□□□ -1.94
LINC00561-201ENST00000565815 TMEM141Q96I45 108 aa2.95□□□□□ -1.94
LINC00561-201ENST00000565815 MRPL35Q9NZE8 188 aaKnown RBP2.95□□□□□ -1.94
LINC00561-201ENST00000565815 MAP1AP78559 2803 aaPredicted RBP2.95□□□□□ -1.94
LINC00561-201ENST00000565815 PKD1L1Q8TDX9 2849 aa2.95□□□□□ -1.94
LINC00561-201ENST00000565815 TNCP24821 2201 aa2.95□□□□□ -1.94
LINC00561-201ENST00000565815 IGKV2D-26A0A0A0MRZ7 120 aa2.95□□□□□ -1.94
LINC00561-201ENST00000565815 IGHV7-4-1A0A0J9YVY3 117 aa2.95□□□□□ -1.94
LINC00561-201ENST00000565815 HES1Q14469 280 aa2.95□□□□□ -1.94
LINC00561-201ENST00000565815 VMO1Q7Z5L0 202 aa2.95□□□□□ -1.94
LINC00561-201ENST00000565815 DYNAPQ8N1N2 210 aa2.95□□□□□ -1.94
LINC00561-201ENST00000565815 LINC01600Q96MT4 127 aa2.95□□□□□ -1.94
LINC00561-201ENST00000565815 SCGB3A1Q96QR1 104 aa2.95□□□□□ -1.94
LINC00561-201ENST00000565815 CYSLTR1Q9Y271 337 aa2.95□□□□□ -1.94
LINC00561-201ENST00000565815 IGHV7-81A0A0B4J1V7 117 aa2.94□□□□□ -1.94
LINC00561-201ENST00000565815 SMKR1H3BMG3 65 aa2.94□□□□□ -1.94
LINC00561-201ENST00000565815 APELAP0DMC3 54 aa2.94□□□□□ -1.94
LINC00561-201ENST00000565815 AZU1P20160 251 aa2.94□□□□□ -1.94
LINC00561-201ENST00000565815 ASIPP42127 132 aa2.94□□□□□ -1.94
LINC00561-201ENST00000565815 UBE2D1P51668 147 aa2.94□□□□□ -1.94
LINC00561-201ENST00000565815 C18orf15Q96N68 181 aa2.94□□□□□ -1.94
LINC00561-201ENST00000565815 TIMM17AQ99595 171 aa2.94□□□□□ -1.94
LINC00561-201ENST00000565815 SPANXDQ9BXN6 97 aa2.94□□□□□ -1.94
LINC00561-201ENST00000565815 ZNF702PQ9H963 129 aa2.94□□□□□ -1.94
LINC00561-201ENST00000565815 PRO0461Q9UI25 63 aa2.94□□□□□ -1.94
LINC00561-201ENST00000565815 BIRC6Q9NR09 4857 aa2.94□□□□□ -1.94
LINC00561-201ENST00000565815 WNK1Q9H4A3 2382 aa2.94□□□□□ -1.94
LINC00561-201ENST00000565815 CD28P10747 220 aa2.94□□□□□ -1.94
LINC00561-201ENST00000565815 C15orf32Q32M92 178 aa2.94□□□□□ -1.94
LINC00561-201ENST00000565815 SBSPONQ8IVN8 264 aa2.94□□□□□ -1.94
LINC00561-201ENST00000565815 LINC00612Q8N6U2 182 aa2.94□□□□□ -1.94
LINC00561-201ENST00000565815 Q8N9W7 124 aa2.94□□□□□ -1.94
LINC00561-201ENST00000565815 OR10J6PQ8NGY7 276 aa2.94□□□□□ -1.94
LINC00561-201ENST00000565815 Q8TAT8 98 aa2.94□□□□□ -1.94
LINC00561-201ENST00000565815 PPDPFLQ8WWR9 84 aa2.94□□□□□ -1.94
LINC00561-201ENST00000565815 AGPAT4-IT1Q9H0P7 198 aa2.94□□□□□ -1.94
LINC00561-201ENST00000565815 MRPL16Q9NX20 251 aaKnown RBP2.94□□□□□ -1.94
LINC00561-201ENST00000565815 RBMY1BA6NDE4 496 aaKnown RBP2.93□□□□□ -1.94
LINC00561-201ENST00000565815 RBMY1EA6NEQ0 496 aaKnown RBP2.93□□□□□ -1.94
LINC00561-201ENST00000565815 H3BUX3 64 aa2.93□□□□□ -1.94
LINC00561-201ENST00000565815 APOMO95445 188 aa2.93□□□□□ -1.94
LINC00561-201ENST00000565815 RBMY1DP0C7P1 496 aaKnown RBP2.93□□□□□ -1.94
LINC00561-201ENST00000565815 UBE2D3P61077 147 aa2.93□□□□□ -1.94
LINC00561-201ENST00000565815 UBE2D2P62837 147 aa2.93□□□□□ -1.94
LINC00561-201ENST00000565815 CFAP126Q5VTH2 177 aa2.93□□□□□ -1.94
LINC00561-201ENST00000565815 ODF3Q96PU9 254 aa2.93□□□□□ -1.94
LINC00561-201ENST00000565815 TRAV8-2A0A0B4J237 113 aa2.93□□□□□ -1.94
LINC00561-201ENST00000565815 TRBV6-5A0A0K0K1A5 114 aa2.93□□□□□ -1.94
LINC00561-201ENST00000565815 A6NDX4 124 aa2.93□□□□□ -1.94
LINC00561-201ENST00000565815 C11orf86A6NJI1 115 aa2.93□□□□□ -1.94
LINC00561-201ENST00000565815 NDUFA4O00483 81 aa2.93□□□□□ -1.94
LINC00561-201ENST00000565815 LGALS1P09382 135 aaKnown RBP2.93□□□□□ -1.94
LINC00561-201ENST00000565815 CRYBA4P53673 196 aa2.93□□□□□ -1.94
LINC00561-201ENST00000565815 NDPQ00604 133 aa2.93□□□□□ -1.94
LINC00561-201ENST00000565815 ATP5G2Q06055 141 aa2.93□□□□□ -1.94
LINC00561-201ENST00000565815 RHOHQ15669 191 aa2.93□□□□□ -1.94
LINC00561-201ENST00000565815 Q1RN00 199 aa2.93□□□□□ -1.94
LINC00561-201ENST00000565815 USMG5Q96IX5 58 aa2.93□□□□□ -1.94
LINC00561-201ENST00000565815 FAM19A4Q96LR4 140 aa2.93□□□□□ -1.94
LINC00561-201ENST00000565815 UFC1Q9Y3C8 167 aa2.93□□□□□ -1.94
LINC00561-201ENST00000565815 A0A0J9YX75 114 aa2.92□□□□□ -1.94
LINC00561-201ENST00000565815 SMAGPQ0VAQ4 97 aa2.92□□□□□ -1.94
LINC00561-201ENST00000565815 PMVKQ15126 192 aa2.92□□□□□ -1.94
LINC00561-201ENST00000565815 C2orf66Q6UXQ4 117 aa2.92□□□□□ -1.94
LINC00561-201ENST00000565815 TEN1Q86WV5 123 aa2.92□□□□□ -1.94
LINC00561-201ENST00000565815 BAALCQ8WXS3 180 aa2.92□□□□□ -1.94
LINC00561-201ENST00000565815 PRADC1Q9BSG0 188 aa2.92□□□□□ -1.94
LINC00561-201ENST00000565815 AGRNO00468 2067 aa2.92□□□□□ -1.94
LINC00561-201ENST00000565815 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.92□□□□□ -1.94
LINC00561-201ENST00000565815 ZNF815PA8K554 130 aa2.92□□□□□ -1.94
LINC00561-201ENST00000565815 K7ERJ3 54 aa2.92□□□□□ -1.94
LINC00561-201ENST00000565815 P0DMU3 169 aa2.92□□□□□ -1.94
LINC00561-201ENST00000565815 FAM231AP0DMU4 169 aa2.92□□□□□ -1.94
LINC00561-201ENST00000565815 FAM231CP0DMU5 169 aa2.92□□□□□ -1.94
LINC00561-201ENST00000565815 S100A4P26447 101 aaKnown RBP2.92□□□□□ -1.94
LINC00561-201ENST00000565815 HLA-DMBP28068 263 aa2.92□□□□□ -1.94
LINC00561-201ENST00000565815 WFDC2Q14508 124 aa2.92□□□□□ -1.94
LINC00561-201ENST00000565815 MRPL23Q16540 153 aaKnown RBP2.92□□□□□ -1.94
LINC00561-201ENST00000565815 ETDBQ3ZM63 59 aa2.92□□□□□ -1.94
LINC00561-201ENST00000565815 MORN3Q6PF18 240 aaPredicted RBP2.92□□□□□ -1.94
LINC00561-201ENST00000565815 KIR2DL4Q99706 377 aa2.92□□□□□ -1.94
LINC00561-201ENST00000565815 NAA38Q9BRA0 125 aaKnown RBP2.92□□□□□ -1.94
LINC00561-201ENST00000565815 PHLDA3Q9Y5J5 127 aa2.92□□□□□ -1.94
LINC00561-201ENST00000565815 A0A0B4J2C4 111 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 SDHAF1A6NFY7 115 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 A8MWV9 139 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 DUSP14O95147 198 aaKnown RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms