RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 MIEN1Q9BRT3 115 aa8.45□□□□□ -1.06
KARS-204ENST00000564578 MRPL18Q9H0U6 180 aaKnown RBP8.45□□□□□ -1.06
KARS-204ENST00000564578 DNAH2Q9P225 4427 aa8.45□□□□□ -1.06
KARS-204ENST00000564578 TRBV25-1A0A075B6N4 114 aa8.44□□□□□ -1.06
KARS-204ENST00000564578 IGHV1-24A0A0C4DH33 117 aa8.44□□□□□ -1.06
KARS-204ENST00000564578 VCYO14598 125 aa8.44□□□□□ -1.06
KARS-204ENST00000564578 RPL32P62910 135 aaKnown RBP8.44□□□□□ -1.06
KARS-204ENST00000564578 LAMTOR2Q9Y2Q5 125 aa8.44□□□□□ -1.06
KARS-204ENST00000564578 COX11Q9Y6N1 276 aa8.44□□□□□ -1.06
KARS-204ENST00000564578 CHCHD7Q9BUK0 85 aa8.44□□□□□ -1.06
KARS-204ENST00000564578 SMIM2Q9BVW6 85 aa8.44□□□□□ -1.06
KARS-204ENST00000564578 IGHV3-30P01768 117 aa8.43□□□□□ -1.06
KARS-204ENST00000564578 IGHV3-33P01772 117 aa8.43□□□□□ -1.06
KARS-204ENST00000564578 IGHV3-30-3P0DP02 117 aa8.43□□□□□ -1.06
KARS-204ENST00000564578 IGHV3-30-5P0DP03 117 aa8.43□□□□□ -1.06
KARS-204ENST00000564578 AMTP48728 403 aa8.43□□□□□ -1.06
KARS-204ENST00000564578 CHCHD5Q9BSY4 110 aa8.43□□□□□ -1.06
KARS-204ENST00000564578 TRAPPC1Q9Y5R8 145 aa8.43□□□□□ -1.06
KARS-204ENST00000564578 ESDP10768 282 aa8.42□□□□□ -1.06
KARS-204ENST00000564578 MPV17L2Q567V2 206 aa8.42□□□□□ -1.06
KARS-204ENST00000564578 HIST1H2BKO60814 126 aa8.42□□□□□ -1.06
KARS-204ENST00000564578 HIST1H2BJP06899 126 aa8.42□□□□□ -1.06
KARS-204ENST00000564578 HIST1H2BOP23527 126 aa8.42□□□□□ -1.06
KARS-204ENST00000564578 HIST1H2BBP33778 126 aa8.42□□□□□ -1.06
KARS-204ENST00000564578 HIST1H2BDP58876 126 aa8.42□□□□□ -1.06
KARS-204ENST00000564578 HIST1H2BCP62807 126 aa8.42□□□□□ -1.06
KARS-204ENST00000564578 HIST2H2BEQ16778 126 aa8.42□□□□□ -1.06
KARS-204ENST00000564578 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.42□□□□□ -1.06
KARS-204ENST00000564578 Q8N976 141 aa8.42□□□□□ -1.06
KARS-204ENST00000564578 HIST1H2BHQ93079 126 aa8.42□□□□□ -1.06
KARS-204ENST00000564578 KIR2DL4Q99706 377 aa8.42□□□□□ -1.06
KARS-204ENST00000564578 HIST1H2BNQ99877 126 aa8.42□□□□□ -1.06
KARS-204ENST00000564578 HIST1H2BMQ99879 126 aa8.42□□□□□ -1.06
KARS-204ENST00000564578 TMEM243Q9BU79 118 aa8.42□□□□□ -1.06
KARS-204ENST00000564578 LOC389332A0A1B0GUA5 103 aa8.41□□□□□ -1.06
KARS-204ENST00000564578 TMEM262E9PQX1 116 aa8.41□□□□□ -1.06
KARS-204ENST00000564578 GAGE6Q13070 117 aa8.41□□□□□ -1.06
KARS-204ENST00000564578 TTC32Q5I0X7 151 aa8.41□□□□□ -1.06
KARS-204ENST00000564578 SS18L2Q9UHA2 77 aa8.41□□□□□ -1.06
KARS-204ENST00000564578 A0A087WX48 190 aa8.41□□□□□ -1.06
KARS-204ENST00000564578 SIGMAR1Q99720 223 aa8.41□□□□□ -1.06
KARS-204ENST00000564578 MAP1LC3AQ9H492 121 aa8.41□□□□□ -1.06
KARS-204ENST00000564578 FRAS1Q86XX4 4008 aa8.4□□□□□ -1.06
KARS-204ENST00000564578 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.4□□□□□ -1.06
KARS-204ENST00000564578 IGKV2-29A2NJV5 120 aaPredicted RBP8.4□□□□□ -1.06
KARS-204ENST00000564578 DNAH10Q8IVF4 4471 aa8.39□□□□□ -1.07
KARS-204ENST00000564578 TRAV9-2A0A087WT02 112 aa8.39□□□□□ -1.07
KARS-204ENST00000564578 IBA57-AS1B1ANH7 110 aa8.39□□□□□ -1.07
KARS-204ENST00000564578 FCER1GP30273 86 aa8.39□□□□□ -1.07
KARS-204ENST00000564578 IFI27P40305 119 aaPredicted RBP8.39□□□□□ -1.07
KARS-204ENST00000564578 IGLV4-60A0A075B6I1 120 aa8.39□□□□□ -1.07
KARS-204ENST00000564578 A0A1B0GUV1 79 aa8.39□□□□□ -1.07
KARS-204ENST00000564578 C10orf126Q8N4M7 172 aa8.39□□□□□ -1.07
KARS-204ENST00000564578 Q8N8P6 123 aa8.39□□□□□ -1.07
KARS-204ENST00000564578 KLK12Q9UKR0 248 aa8.39□□□□□ -1.07
KARS-204ENST00000564578 SMIM20Q8N5G0 67 aa8.38□□□□□ -1.07
KARS-204ENST00000564578 C20orf203Q8NBC4 194 aa8.38□□□□□ -1.07
KARS-204ENST00000564578 H7C423 109 aa8.37□□□□□ -1.07
KARS-204ENST00000564578 RTL8CO15255 209 aa8.37□□□□□ -1.07
KARS-204ENST00000564578 TRGC2P03986 189 aa8.37□□□□□ -1.07
KARS-204ENST00000564578 FGF6P10767 208 aa8.37□□□□□ -1.07
KARS-204ENST00000564578 UBE2L6O14933 153 aa8.37□□□□□ -1.07
KARS-204ENST00000564578 LAGE3Q14657 143 aa8.37□□□□□ -1.07
KARS-204ENST00000564578 C1orf134Q5TEV5 83 aa8.37□□□□□ -1.07
KARS-204ENST00000564578 Q6ZRN7 208 aaPredicted RBP8.37□□□□□ -1.07
KARS-204ENST00000564578 C6orf223Q8N319 242 aa8.37□□□□□ -1.07
KARS-204ENST00000564578 STPG4Q8N801 248 aa8.37□□□□□ -1.07
KARS-204ENST00000564578 C18orf32Q8TCD1 76 aa8.37□□□□□ -1.07
KARS-204ENST00000564578 NXT2Q9NPJ8 142 aaKnown RBP8.37□□□□□ -1.07
KARS-204ENST00000564578 FAT2Q9NYQ8 4349 aa8.36□□□□□ -1.07
KARS-204ENST00000564578 ANGP03950 147 aaKnown RBP8.36□□□□□ -1.07
KARS-204ENST00000564578 RPL39P62891 51 aaKnown RBP8.36□□□□□ -1.07
KARS-204ENST00000564578 VAMP3Q15836 100 aa8.36□□□□□ -1.07
KARS-204ENST00000564578 COA6Q5JTJ3 125 aaKnown RBP8.36□□□□□ -1.07
KARS-204ENST00000564578 ENHOQ6UWT2 76 aa8.36□□□□□ -1.07
KARS-204ENST00000564578 PRR34Q9NV39 138 aa8.36□□□□□ -1.07
KARS-204ENST00000564578 LINC01546A6NGU7 62 aa8.35□□□□□ -1.07
KARS-204ENST00000564578 LINC00269Q8N2A0 174 aa8.35□□□□□ -1.07
KARS-204ENST00000564578 URB1-AS1Q96HZ7 61 aa8.35□□□□□ -1.07
KARS-204ENST00000564578 K7EMI3 77 aa8.35□□□□□ -1.07
KARS-204ENST00000564578 PDZD11Q5EBL8 140 aa8.35□□□□□ -1.07
KARS-204ENST00000564578 PRSS3P2Q8NHM4 247 aa8.35□□□□□ -1.07
KARS-204ENST00000564578 FAM104AQ969W3 186 aa8.35□□□□□ -1.07
KARS-204ENST00000564578 Q9HAA7 133 aa8.35□□□□□ -1.07
KARS-204ENST00000564578 UBE2D4Q9Y2X8 147 aa8.35□□□□□ -1.07
KARS-204ENST00000564578 DNAH17Q9UFH2 4485 aa8.34□□□□□ -1.07
KARS-204ENST00000564578 BATFQ16520 125 aa8.34□□□□□ -1.07
KARS-204ENST00000564578 AMMECR1LQ6DCA0 310 aa8.34□□□□□ -1.07
KARS-204ENST00000564578 RNASEKQ6P5S7 137 aaKnown RBP8.34□□□□□ -1.07
KARS-204ENST00000564578 UBE2WQ96B02 151 aa8.34□□□□□ -1.07
KARS-204ENST00000564578 CSDC2Q9Y534 153 aaKnown RBP8.34□□□□□ -1.07
KARS-204ENST00000564578 CLPSL2Q6UWE3 100 aa8.33□□□□□ -1.08
KARS-204ENST00000564578 CDC42SE2Q9NRR3 84 aa8.33□□□□□ -1.08
KARS-204ENST00000564578 TRAV8-3A0A0A6YYJ7 113 aa8.33□□□□□ -1.08
KARS-204ENST00000564578 ORMDL2Q53FV1 153 aa8.33□□□□□ -1.08
KARS-204ENST00000564578 REG3AQ06141 175 aa8.32□□□□□ -1.08
KARS-204ENST00000564578 TIMM21Q9BVV7 248 aa8.32□□□□□ -1.08
KARS-204ENST00000564578 C2orf66Q6UXQ4 117 aa8.31□□□□□ -1.08
KARS-204ENST00000564578 NFE4Q86UQ8 179 aa8.31□□□□□ -1.08
KARS-204ENST00000564578 OR5A1Q8NGJ0 315 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms