RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 LINC00959A0A1B0GUT2 108 aa9.51□□□□□ -0.89
SPG7-210ENST00000564409 VCYO14598 125 aa9.51□□□□□ -0.89
SPG7-210ENST00000564409 CCL25O15444 150 aa9.51□□□□□ -0.89
SPG7-210ENST00000564409 SRP19P09132 144 aaKnown RBP9.51□□□□□ -0.89
SPG7-210ENST00000564409 CHTF8P0CG12 524 aa9.51□□□□□ -0.89
SPG7-210ENST00000564409 HNRNPA3P51991 378 aaKnown RBP9.51□□□□□ -0.89
SPG7-210ENST00000564409 SS18Q15532 418 aa9.51□□□□□ -0.89
SPG7-210ENST00000564409 HIGD2BQ4VC39 106 aa9.51□□□□□ -0.89
SPG7-210ENST00000564409 C7orf77A4D0Y5 90 aa9.5□□□□□ -0.89
SPG7-210ENST00000564409 TMEM241Q24JQ0 296 aa9.5□□□□□ -0.89
SPG7-210ENST00000564409 CDC42SE2Q9NRR3 84 aa9.5□□□□□ -0.89
SPG7-210ENST00000564409 TMEM242Q9NWH2 141 aa9.5□□□□□ -0.89
SPG7-210ENST00000564409 V9GYV3 84 aa9.5□□□□□ -0.89
SPG7-210ENST00000564409 PPP1R2P9O14990 202 aa9.49□□□□□ -0.89
SPG7-210ENST00000564409 GAS8-AS1O95177 125 aa9.49□□□□□ -0.89
SPG7-210ENST00000564409 XCL1P47992 114 aa9.49□□□□□ -0.89
SPG7-210ENST00000564409 CD164L2Q6UWJ8 174 aa9.49□□□□□ -0.89
SPG7-210ENST00000564409 AMN1Q8IY45 258 aa9.49□□□□□ -0.89
SPG7-210ENST00000564409 ZNF664Q8N3J9 261 aa9.49□□□□□ -0.89
SPG7-210ENST00000564409 NUP35Q8NFH5 326 aa9.49□□□□□ -0.89
SPG7-210ENST00000564409 NAT8BQ9UHF3 227 aa9.49□□□□□ -0.89
SPG7-210ENST00000564409 CSDC2Q9Y534 153 aaKnown RBP9.49□□□□□ -0.89
SPG7-210ENST00000564409 FCER1GP30273 86 aa9.48□□□□□ -0.89
SPG7-210ENST00000564409 MAJINQ3KP22 176 aa9.48□□□□□ -0.89
SPG7-210ENST00000564409 PRSS3P2Q8NHM4 247 aa9.48□□□□□ -0.89
SPG7-210ENST00000564409 ISOC2Q96AB3 205 aa9.48□□□□□ -0.89
SPG7-210ENST00000564409 KIR2DL4Q99706 377 aa9.48□□□□□ -0.89
SPG7-210ENST00000564409 LRP1Q07954 4544 aaKnown RBP9.47□□□□□ -0.89
SPG7-210ENST00000564409 A0A1B0GW15 77 aa9.47□□□□□ -0.89
SPG7-210ENST00000564409 C1orf196B1AJZ1 125 aa9.47□□□□□ -0.89
SPG7-210ENST00000564409 TCAPO15273 167 aa9.47□□□□□ -0.89
SPG7-210ENST00000564409 SUMO2P61956 95 aaKnown RBP9.47□□□□□ -0.89
SPG7-210ENST00000564409 SMDT1Q9H4I9 107 aa9.47□□□□□ -0.89
SPG7-210ENST00000564409 IGKV2-24A0A0C4DH68 120 aa9.46□□□□□ -0.9
SPG7-210ENST00000564409 LINC00862A6NCI5 91 aa9.46□□□□□ -0.9
SPG7-210ENST00000564409 ZNF561-AS1K7EIQ3 104 aa9.46□□□□□ -0.9
SPG7-210ENST00000564409 STPG4Q8N801 248 aa9.46□□□□□ -0.9
SPG7-210ENST00000564409 TMEM18Q96B42 140 aa9.46□□□□□ -0.9
SPG7-210ENST00000564409 CARD19Q96LW7 228 aa9.46□□□□□ -0.9
SPG7-210ENST00000564409 NAT8Q9UHE5 227 aa9.46□□□□□ -0.9
SPG7-210ENST00000564409 PLA2G2DQ9UNK4 145 aa9.46□□□□□ -0.9
SPG7-210ENST00000564409 PKHD1L1Q86WI1 4243 aa9.45□□□□□ -0.9
SPG7-210ENST00000564409 PHOX2AO14813 284 aa9.45□□□□□ -0.9
SPG7-210ENST00000564409 RPL23P62829 140 aaKnown RBP9.45□□□□□ -0.9
SPG7-210ENST00000564409 NRACQ8N912 160 aa9.45□□□□□ -0.9
SPG7-210ENST00000564409 C20orf78Q9BR46 151 aa9.45□□□□□ -0.9
SPG7-210ENST00000564409 TIMM21Q9BVV7 248 aa9.45□□□□□ -0.9
SPG7-210ENST00000564409 SMIM27A0A1W2PRY6 76 aa9.44□□□□□ -0.9
SPG7-210ENST00000564409 S100A8P05109 93 aa9.44□□□□□ -0.9
SPG7-210ENST00000564409 RPL32P62910 135 aaKnown RBP9.44□□□□□ -0.9
SPG7-210ENST00000564409 SYCNQ0VAF6 134 aa9.44□□□□□ -0.9
SPG7-210ENST00000564409 FAM104BQ5XKR9 115 aa9.44□□□□□ -0.9
SPG7-210ENST00000564409 FAT3Q8TDW7 4589 aa9.44□□□□□ -0.9
SPG7-210ENST00000564409 HMCN2Q8NDA2 5059 aa9.43□□□□□ -0.9
SPG7-210ENST00000564409 TRBV24-1A0A075B6N3 115 aa9.43□□□□□ -0.9
SPG7-210ENST00000564409 A0A096LNI7 61 aa9.43□□□□□ -0.9
SPG7-210ENST00000564409 A0A1B0GVG6 124 aa9.43□□□□□ -0.9
SPG7-210ENST00000564409 COX7A2LO14548 114 aa9.43□□□□□ -0.9
SPG7-210ENST00000564409 MT1HL1P0DM35 61 aa9.43□□□□□ -0.9
SPG7-210ENST00000564409 MALP21145 153 aa9.43□□□□□ -0.9
SPG7-210ENST00000564409 PEA15Q15121 130 aa9.43□□□□□ -0.9
SPG7-210ENST00000564409 ADIRFQ15847 76 aa9.43□□□□□ -0.9
SPG7-210ENST00000564409 UBE2D4Q9Y2X8 147 aa9.43□□□□□ -0.9
SPG7-210ENST00000564409 SMKR1H3BMG3 65 aa9.42□□□□□ -0.9
SPG7-210ENST00000564409 CAMPP49913 170 aa9.42□□□□□ -0.9
SPG7-210ENST00000564409 MRPL51Q4U2R6 128 aaKnown RBP9.42□□□□□ -0.9
SPG7-210ENST00000564409 PRR3P79522 188 aaKnown RBP9.41□□□□□ -0.9
SPG7-210ENST00000564409 LOC107984640A0A0U1RRK4 108 aa9.4□□□□□ -0.9
SPG7-210ENST00000564409 F8W036 122 aa9.4□□□□□ -0.9
SPG7-210ENST00000564409 APOMO95445 188 aa9.4□□□□□ -0.9
SPG7-210ENST00000564409 CKS2P33552 79 aa9.4□□□□□ -0.9
SPG7-210ENST00000564409 IGLV4-69A0A075B6H9 119 aa9.39□□□□□ -0.91
SPG7-210ENST00000564409 PPBPP02775 128 aa9.39□□□□□ -0.91
SPG7-210ENST00000564409 LINC00526Q96FQ7 95 aa9.39□□□□□ -0.91
SPG7-210ENST00000564409 C2orf48Q96LS8 159 aa9.39□□□□□ -0.91
SPG7-210ENST00000564409 TRAV13-1A0A0B4J241 112 aa9.38□□□□□ -0.91
SPG7-210ENST00000564409 C9JQL5 133 aa9.38□□□□□ -0.91
SPG7-210ENST00000564409 F8WDY8 70 aa9.38□□□□□ -0.91
SPG7-210ENST00000564409 PTTG1IPP53801 180 aa9.38□□□□□ -0.91
SPG7-210ENST00000564409 HBBP68871 147 aa9.38□□□□□ -0.91
SPG7-210ENST00000564409 SPANXA1Q9NS26 97 aa9.38□□□□□ -0.91
SPG7-210ENST00000564409 TNFRSF6BO95407 300 aa9.37□□□□□ -0.91
SPG7-210ENST00000564409 SPINK6Q6UWN8 80 aa9.37□□□□□ -0.91
SPG7-210ENST00000564409 Q6ZRP5 223 aa9.37□□□□□ -0.91
SPG7-210ENST00000564409 LINC01600Q96MT4 127 aa9.37□□□□□ -0.91
SPG7-210ENST00000564409 CAMK2N2Q96S95 79 aa9.37□□□□□ -0.91
SPG7-210ENST00000564409 SMIM2Q9BVW6 85 aa9.37□□□□□ -0.91
SPG7-210ENST00000564409 MRPS36P82909 103 aaKnown RBP9.36□□□□□ -0.91
SPG7-210ENST00000564409 RNF151Q2KHN1 245 aa9.36□□□□□ -0.91
SPG7-210ENST00000564409 Q6ZUT4 128 aa9.36□□□□□ -0.91
SPG7-210ENST00000564409 OR10D4PQ8NGN7 298 aa9.36□□□□□ -0.91
SPG7-210ENST00000564409 A0A1B0GXF2 115 aa9.35□□□□□ -0.91
SPG7-210ENST00000564409 RNASE13Q5GAN3 156 aaKnown RBP9.35□□□□□ -0.91
SPG7-210ENST00000564409 REG3GQ6UW15 175 aa9.35□□□□□ -0.91
SPG7-210ENST00000564409 ATP5L2Q7Z4Y8 100 aa9.35□□□□□ -0.91
SPG7-210ENST00000564409 D6R8Y8 96 aa9.34□□□□□ -0.91
SPG7-210ENST00000564409 SRSF3P84103 164 aaKnown RBP9.34□□□□□ -0.91
SPG7-210ENST00000564409 GAGE2BQ13066 116 aa9.34□□□□□ -0.91
SPG7-210ENST00000564409 MRPL54Q6P161 138 aaKnown RBP9.34□□□□□ -0.91
SPG7-210ENST00000564409 C5orf38Q86SI9 138 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms