RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 C15orf53Q8NAA6 179 aa3.58□□□□□ -1.84
HERPUD1-207ENST00000563781 KRTAP9-8Q9BYQ0 159 aa3.58□□□□□ -1.84
HERPUD1-207ENST00000563781 SMCO4Q9NRQ5 59 aa3.58□□□□□ -1.84
HERPUD1-207ENST00000563781 KLK5Q9Y337 293 aaPredicted RBP3.58□□□□□ -1.84
HERPUD1-207ENST00000563781 V9GYY9 64 aa3.58□□□□□ -1.84
HERPUD1-207ENST00000563781 FRAS1Q86XX4 4008 aa3.57□□□□□ -1.84
HERPUD1-207ENST00000563781 TRBV10-1A0A0K0K1A3 114 aa3.57□□□□□ -1.84
HERPUD1-207ENST00000563781 TSHBP01222 138 aa3.57□□□□□ -1.84
HERPUD1-207ENST00000563781 IGKV2-30P06310 120 aa3.57□□□□□ -1.84
HERPUD1-207ENST00000563781 RPS10P46783 165 aaKnown RBP3.57□□□□□ -1.84
HERPUD1-207ENST00000563781 TCTAP57738 103 aa3.57□□□□□ -1.84
HERPUD1-207ENST00000563781 UBE2D3P61077 147 aa3.57□□□□□ -1.84
HERPUD1-207ENST00000563781 UBE2D2P62837 147 aa3.57□□□□□ -1.84
HERPUD1-207ENST00000563781 FRZBQ92765 325 aa3.57□□□□□ -1.84
HERPUD1-207ENST00000563781 RPL39LQ96EH5 51 aaKnown RBP3.57□□□□□ -1.84
HERPUD1-207ENST00000563781 MRAP2Q96G30 205 aa3.57□□□□□ -1.84
HERPUD1-207ENST00000563781 PRADC1Q9BSG0 188 aa3.57□□□□□ -1.84
HERPUD1-207ENST00000563781 ICOSQ9Y6W8 199 aa3.57□□□□□ -1.84
HERPUD1-207ENST00000563781 RYR1P21817 5038 aa3.57□□□□□ -1.84
HERPUD1-207ENST00000563781 FAT2Q9NYQ8 4349 aa3.56□□□□□ -1.84
HERPUD1-207ENST00000563781 TRBV6-5A0A0K0K1A5 114 aa3.56□□□□□ -1.84
HERPUD1-207ENST00000563781 COLCA2A8K830 154 aa3.56□□□□□ -1.84
HERPUD1-207ENST00000563781 LINC00587B1AMM8 73 aa3.56□□□□□ -1.84
HERPUD1-207ENST00000563781 D6R8Y8 96 aa3.56□□□□□ -1.84
HERPUD1-207ENST00000563781 NPYP01303 97 aa3.56□□□□□ -1.84
HERPUD1-207ENST00000563781 PRSS2P07478 247 aa3.56□□□□□ -1.84
HERPUD1-207ENST00000563781 RPL36AP83881 106 aaKnown RBP3.56□□□□□ -1.84
HERPUD1-207ENST00000563781 ESRGQ1W209 222 aa3.56□□□□□ -1.84
HERPUD1-207ENST00000563781 Q8N9P0 234 aaPredicted RBP3.56□□□□□ -1.84
HERPUD1-207ENST00000563781 ZNRF2Q8NHG8 242 aa3.56□□□□□ -1.84
HERPUD1-207ENST00000563781 DNAJC30Q96LL9 226 aa3.56□□□□□ -1.84
HERPUD1-207ENST00000563781 C2orf48Q96LS8 159 aa3.56□□□□□ -1.84
HERPUD1-207ENST00000563781 GNB1LQ9BYB4 327 aa3.56□□□□□ -1.84
HERPUD1-207ENST00000563781 NIT2Q9NQR4 276 aa3.56□□□□□ -1.84
HERPUD1-207ENST00000563781 TRBV7-3A0A075B6L6 115 aa3.55□□□□□ -1.84
HERPUD1-207ENST00000563781 IGHV3-38A0A0C4DH36 116 aa3.55□□□□□ -1.84
HERPUD1-207ENST00000563781 A0A1B0GV72 72 aa3.55□□□□□ -1.84
HERPUD1-207ENST00000563781 H7C1H1 209 aa3.55□□□□□ -1.84
HERPUD1-207ENST00000563781 TCAPO15273 167 aa3.55□□□□□ -1.84
HERPUD1-207ENST00000563781 HLA-DQA1P01909 254 aa3.55□□□□□ -1.84
HERPUD1-207ENST00000563781 MT-ND6P03923 174 aa3.55□□□□□ -1.84
HERPUD1-207ENST00000563781 SRIP30626 198 aa3.55□□□□□ -1.84
HERPUD1-207ENST00000563781 CKS2P33552 79 aa3.55□□□□□ -1.84
HERPUD1-207ENST00000563781 POLR2KP53803 58 aaKnown RBP3.55□□□□□ -1.84
HERPUD1-207ENST00000563781 KIAA1644Q3SXP7 199 aa3.55□□□□□ -1.84
HERPUD1-207ENST00000563781 OR10J3Q5JRS4 329 aa3.55□□□□□ -1.84
HERPUD1-207ENST00000563781 LYPD5Q6UWN5 251 aa3.55□□□□□ -1.84
HERPUD1-207ENST00000563781 NTM-AS1Q6ZSK4 140 aa3.55□□□□□ -1.84
HERPUD1-207ENST00000563781 NEGR1Q7Z3B1 354 aa3.55□□□□□ -1.84
HERPUD1-207ENST00000563781 SH2D6Q7Z4S9 175 aa3.55□□□□□ -1.84
HERPUD1-207ENST00000563781 ATP6V0E2Q8NHE4 81 aa3.55□□□□□ -1.84
HERPUD1-207ENST00000563781 TMEM70Q9BUB7 260 aa3.55□□□□□ -1.84
HERPUD1-207ENST00000563781 LINC00588Q9Y4M8 146 aa3.55□□□□□ -1.84
HERPUD1-207ENST00000563781 DYNC1H1Q14204 4646 aaKnown RBP3.55□□□□□ -1.84
HERPUD1-207ENST00000563781 IGLV2-18A0A075B6J9 118 aa3.54□□□□□ -1.84
HERPUD1-207ENST00000563781 TRBV27A0A0K0K1C4 114 aa3.54□□□□□ -1.84
HERPUD1-207ENST00000563781 SDHAF1A6NFY7 115 aa3.54□□□□□ -1.84
HERPUD1-207ENST00000563781 PHOX2AO14813 284 aa3.54□□□□□ -1.84
HERPUD1-207ENST00000563781 APCSP02743 223 aa3.54□□□□□ -1.84
HERPUD1-207ENST00000563781 PPBPP02775 128 aa3.54□□□□□ -1.84
HERPUD1-207ENST00000563781 LINC00614P0C842 121 aa3.54□□□□□ -1.84
HERPUD1-207ENST00000563781 RPL32P62910 135 aaKnown RBP3.54□□□□□ -1.84
HERPUD1-207ENST00000563781 FABP9Q0Z7S8 132 aa3.54□□□□□ -1.84
HERPUD1-207ENST00000563781 ORMDL3Q8N138 153 aa3.54□□□□□ -1.84
HERPUD1-207ENST00000563781 BAALCQ8WXS3 180 aa3.54□□□□□ -1.84
HERPUD1-207ENST00000563781 FAM218AQ96MZ4 157 aa3.54□□□□□ -1.84
HERPUD1-207ENST00000563781 PRELID3AQ96N28 172 aa3.54□□□□□ -1.84
HERPUD1-207ENST00000563781 GTSF1LQ9H1H1 148 aa3.54□□□□□ -1.84
HERPUD1-207ENST00000563781 ST20Q9HBF5 79 aa3.54□□□□□ -1.84
HERPUD1-207ENST00000563781 MRPS16Q9Y3D3 137 aaKnown RBP3.54□□□□□ -1.84
HERPUD1-207ENST00000563781 DNAH5Q8TE73 4624 aa3.53□□□□□ -1.84
HERPUD1-207ENST00000563781 TSPAN13O95857 204 aa3.53□□□□□ -1.84
HERPUD1-207ENST00000563781 PPP1R17O96001 155 aa3.53□□□□□ -1.84
HERPUD1-207ENST00000563781 RAB5AP20339 215 aa3.53□□□□□ -1.84
HERPUD1-207ENST00000563781 LAGE3Q14657 143 aa3.53□□□□□ -1.84
HERPUD1-207ENST00000563781 IQCJQ1A5X6 159 aa3.53□□□□□ -1.84
HERPUD1-207ENST00000563781 PDZD11Q5EBL8 140 aa3.53□□□□□ -1.84
HERPUD1-207ENST00000563781 LELP1Q5T871 98 aa3.53□□□□□ -1.84
HERPUD1-207ENST00000563781 LGALS9CQ6DKI2 356 aa3.53□□□□□ -1.84
HERPUD1-207ENST00000563781 DAZ4Q86SG3 579 aaKnown RBP3.53□□□□□ -1.84
HERPUD1-207ENST00000563781 LINC01561Q8N1V8 128 aa3.53□□□□□ -1.84
HERPUD1-207ENST00000563781 DEFB104AQ8WTQ1 72 aa3.53□□□□□ -1.84
HERPUD1-207ENST00000563781 C20orf78Q9BR46 151 aa3.53□□□□□ -1.84
HERPUD1-207ENST00000563781 UPK3BQ9BT76 320 aa3.53□□□□□ -1.84
HERPUD1-207ENST00000563781 SMIM2Q9BVW6 85 aa3.53□□□□□ -1.84
HERPUD1-207ENST00000563781 DAZ3Q9NR90 486 aaKnown RBP3.53□□□□□ -1.84
HERPUD1-207ENST00000563781 LAMTOR2Q9Y2Q5 125 aa3.53□□□□□ -1.84
HERPUD1-207ENST00000563781 TRAPPC1Q9Y5R8 145 aa3.53□□□□□ -1.84
HERPUD1-207ENST00000563781 TRBV6-8A0A0A6YYG3 113 aa3.52□□□□□ -1.85
HERPUD1-207ENST00000563781 LCE6AA0A183 80 aa3.52□□□□□ -1.85
HERPUD1-207ENST00000563781 A0A1B0GV90 55 aa3.52□□□□□ -1.85
HERPUD1-207ENST00000563781 TRGC2P03986 189 aa3.52□□□□□ -1.85
HERPUD1-207ENST00000563781 ESDP10768 282 aa3.52□□□□□ -1.85
HERPUD1-207ENST00000563781 CCL18P55774 89 aa3.52□□□□□ -1.85
HERPUD1-207ENST00000563781 RBX1P62877 108 aa3.52□□□□□ -1.85
HERPUD1-207ENST00000563781 TMEM97Q5BJF2 176 aa3.52□□□□□ -1.85
HERPUD1-207ENST00000563781 LINC00242Q5T6M2 205 aa3.52□□□□□ -1.85
HERPUD1-207ENST00000563781 NFE4Q86UQ8 179 aa3.52□□□□□ -1.85
HERPUD1-207ENST00000563781 WFDC10BQ8IUB3 73 aa3.52□□□□□ -1.85
HERPUD1-207ENST00000563781 CHCHD7Q9BUK0 85 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms