RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 EDN2P20800 178 aa13.57□□□□□ -0.24
BBS4-204ENST00000562084 SDIM1Q6ZPB5 146 aa13.57□□□□□ -0.24
BBS4-204ENST00000562084 VPS13CQ709C8 3753 aa13.57□□□□□ -0.24
BBS4-204ENST00000562084 NPC2P61916 151 aa13.57□□□□□ -0.24
BBS4-204ENST00000562084 BLCAPP62952 87 aa13.57□□□□□ -0.24
BBS4-204ENST00000562084 Q6ZSV7 163 aa13.57□□□□□ -0.24
BBS4-204ENST00000562084 LINC00308Q8TCZ7 52 aa13.57□□□□□ -0.24
BBS4-204ENST00000562084 FAM236AA0A1B0GUQ0 79 aa13.56□□□□□ -0.24
BBS4-204ENST00000562084 FAM236BA0A1B0GV22 79 aa13.56□□□□□ -0.24
BBS4-204ENST00000562084 FAM222AQ5U5X8 452 aa13.56□□□□□ -0.24
BBS4-204ENST00000562084 CEMP1Q6PRD7 247 aaPredicted RBP13.56□□□□□ -0.24
BBS4-204ENST00000562084 SHISA2Q6UWI4 295 aa13.56□□□□□ -0.24
BBS4-204ENST00000562084 LRRC75A-AS1Q8N1F1 130 aa13.56□□□□□ -0.24
BBS4-204ENST00000562084 PSMB8P28062 276 aa13.55□□□□□ -0.24
BBS4-204ENST00000562084 DAND5Q8N907 189 aa13.55□□□□□ -0.24
BBS4-204ENST00000562084 PEMTQ9UBM1 199 aa13.55□□□□□ -0.24
BBS4-204ENST00000562084 IGLV5-39A0A0G2JS06 123 aa13.55□□□□□ -0.24
BBS4-204ENST00000562084 AKAP9Q99996 3911 aa13.54□□□□□ -0.24
BBS4-204ENST00000562084 UQCRQO14949 82 aa13.54□□□□□ -0.24
BBS4-204ENST00000562084 HERVK_113P63121 156 aa13.54□□□□□ -0.24
BBS4-204ENST00000562084 FAM19A3Q7Z5A8 133 aa13.54□□□□□ -0.24
BBS4-204ENST00000562084 C3orf22Q8N5N4 141 aa13.54□□□□□ -0.24
BBS4-204ENST00000562084 INAFM2P0DMQ5 153 aa13.53□□□□□ -0.24
BBS4-204ENST00000562084 ZNF415Q09FC8 603 aa13.53□□□□□ -0.24
BBS4-204ENST00000562084 CDKN2A-AS1Q9UH64 79 aa13.53□□□□□ -0.24
BBS4-204ENST00000562084 CYSRT1A8MQ03 144 aa13.53□□□□□ -0.24
BBS4-204ENST00000562084 A8MTW9 85 aa13.53□□□□□ -0.24
BBS4-204ENST00000562084 A8MZ25 164 aa13.53□□□□□ -0.24
BBS4-204ENST00000562084 RNASE13Q5GAN3 156 aaKnown RBP13.53□□□□□ -0.24
BBS4-204ENST00000562084 IGHV4-38-2P0DP08 117 aa13.52□□□□□ -0.25
BBS4-204ENST00000562084 KRTAP1-3Q8IUG1 177 aa13.52□□□□□ -0.25
BBS4-204ENST00000562084 LINC00467Q9BRT7 94 aa13.52□□□□□ -0.25
BBS4-204ENST00000562084 PIMREGQ9BSJ6 248 aa13.52□□□□□ -0.25
BBS4-204ENST00000562084 MYO9AB2RTY4 2548 aa13.52□□□□□ -0.25
BBS4-204ENST00000562084 TEX15Q9BXT5 2789 aa13.51□□□□□ -0.25
BBS4-204ENST00000562084 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.5□□□□□ -0.25
BBS4-204ENST00000562084 IGHV3-73A0A0B4J1V6 119 aa13.5□□□□□ -0.25
BBS4-204ENST00000562084 IGKV2-29A2NJV5 120 aaPredicted RBP13.5□□□□□ -0.25
BBS4-204ENST00000562084 IGHV3-53P01767 116 aa13.5□□□□□ -0.25
BBS4-204ENST00000562084 C10orf105Q8TEF2 133 aa13.5□□□□□ -0.25
BBS4-204ENST00000562084 LINC00526Q96FQ7 95 aa13.5□□□□□ -0.25
BBS4-204ENST00000562084 BEAN1Q3B7T3 259 aa13.5□□□□□ -0.25
BBS4-204ENST00000562084 C9orf153Q5TBE3 101 aa13.5□□□□□ -0.25
BBS4-204ENST00000562084 DUX5Q96PT3 197 aa13.5□□□□□ -0.25
BBS4-204ENST00000562084 IGHV4-30-2A0A087WSY4 118 aa13.49□□□□□ -0.25
BBS4-204ENST00000562084 PF4P02776 101 aa13.49□□□□□ -0.25
BBS4-204ENST00000562084 PROK1P58294 105 aa13.49□□□□□ -0.25
BBS4-204ENST00000562084 C5orf38Q86SI9 138 aa13.49□□□□□ -0.25
BBS4-204ENST00000562084 OVOL2Q9BRP0 275 aa13.49□□□□□ -0.25
BBS4-204ENST00000562084 Q9H8V8 135 aa13.49□□□□□ -0.25
BBS4-204ENST00000562084 NDUFA7O95182 113 aa13.48□□□□□ -0.25
BBS4-204ENST00000562084 DSCR9P59020 149 aa13.48□□□□□ -0.25
BBS4-204ENST00000562084 DAZ2Q13117 558 aaKnown RBP13.48□□□□□ -0.25
BBS4-204ENST00000562084 DGAT2L7PQ6IED9 249 aa13.48□□□□□ -0.25
BBS4-204ENST00000562084 DAZ4Q86SG3 579 aaKnown RBP13.48□□□□□ -0.25
BBS4-204ENST00000562084 DAZ3Q9NR90 486 aaKnown RBP13.48□□□□□ -0.25
BBS4-204ENST00000562084 ITPR3Q14573 2671 aa13.48□□□□□ -0.25
BBS4-204ENST00000562084 BAALC-AS2P0C853 105 aa13.48□□□□□ -0.25
BBS4-204ENST00000562084 RBMY1A1P0DJD3 496 aaKnown RBP13.48□□□□□ -0.25
BBS4-204ENST00000562084 RBMY1CP0DJD4 496 aa13.48□□□□□ -0.25
BBS4-204ENST00000562084 RBMY1FQ15415 496 aaKnown RBP13.48□□□□□ -0.25
BBS4-204ENST00000562084 SMCR5Q8TEV8 140 aa13.47□□□□□ -0.25
BBS4-204ENST00000562084 VPREB3Q9UKI3 123 aa13.47□□□□□ -0.25
BBS4-204ENST00000562084 WFDC11Q8NEX6 87 aa13.46□□□□□ -0.25
BBS4-204ENST00000562084 Q96MF0 132 aa13.46□□□□□ -0.25
BBS4-204ENST00000562084 OTOGQ6ZRI0 2925 aa13.46□□□□□ -0.25
BBS4-204ENST00000562084 CSDC2Q9Y534 153 aaKnown RBP13.46□□□□□ -0.26
BBS4-204ENST00000562084 MED13LQ71F56 2210 aa13.45□□□□□ -0.26
BBS4-204ENST00000562084 IGHV4-61A0A0C4DH41 118 aa13.45□□□□□ -0.26
BBS4-204ENST00000562084 RS1O15537 224 aa13.44□□□□□ -0.26
BBS4-204ENST00000562084 TMEM95Q3KNT9 176 aa13.44□□□□□ -0.26
BBS4-204ENST00000562084 Q6ZSN1 163 aa13.44□□□□□ -0.26
BBS4-204ENST00000562084 LINC00242Q5T6M2 205 aa13.44□□□□□ -0.26
BBS4-204ENST00000562084 ZNF625Q96I27 306 aaPredicted RBP13.44□□□□□ -0.26
BBS4-204ENST00000562084 CR1P17927 2039 aa13.44□□□□□ -0.26
BBS4-204ENST00000562084 IGHV3OR16-12A0A075B7B8 117 aa13.43□□□□□ -0.26
BBS4-204ENST00000562084 TRAV13-2A0A0B4J235 113 aa13.43□□□□□ -0.26
BBS4-204ENST00000562084 COX7CP15954 63 aa13.43□□□□□ -0.26
BBS4-204ENST00000562084 SYNJ2BPP57105 145 aa13.43□□□□□ -0.26
BBS4-204ENST00000562084 A0A1B0GX51 115 aa13.42□□□□□ -0.26
BBS4-204ENST00000562084 SMIM1B2RUZ4 78 aa13.42□□□□□ -0.26
BBS4-204ENST00000562084 ATOX1O00244 68 aa13.42□□□□□ -0.26
BBS4-204ENST00000562084 HIST2H2BDQ6DRA6 164 aa13.42□□□□□ -0.26
BBS4-204ENST00000562084 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.42□□□□□ -0.26
BBS4-204ENST00000562084 A0A096LNT2 108 aa13.42□□□□□ -0.26
BBS4-204ENST00000562084 KNCNA6PVL3 124 aa13.42□□□□□ -0.26
BBS4-204ENST00000562084 RPL28P46779 137 aaKnown RBP13.42□□□□□ -0.26
BBS4-204ENST00000562084 COX6A2Q02221 97 aa13.42□□□□□ -0.26
BBS4-204ENST00000562084 SOSTDC1Q6X4U4 206 aa13.42□□□□□ -0.26
BBS4-204ENST00000562084 PRIMA1Q86XR5 153 aa13.42□□□□□ -0.26
BBS4-204ENST00000562084 FLNAP21333 2647 aaKnown RBP13.42□□□□□ -0.26
BBS4-204ENST00000562084 CELSR1Q9NYQ6 3014 aa13.41□□□□□ -0.26
BBS4-204ENST00000562084 MSMBP08118 114 aa13.41□□□□□ -0.26
BBS4-204ENST00000562084 HTN1P15515 57 aa13.41□□□□□ -0.26
BBS4-204ENST00000562084 HIST1H4AP62805 103 aaKnown RBP13.41□□□□□ -0.26
BBS4-204ENST00000562084 ZNF469Q96JG9 3925 aaPredicted RBP13.41□□□□□ -0.26
BBS4-204ENST00000562084 ABCA2Q9BZC7 2435 aa13.41□□□□□ -0.26
BBS4-204ENST00000562084 ZANQ9Y493 2812 aa13.41□□□□□ -0.26
BBS4-204ENST00000562084 CREBBPQ92793 2442 aa13.4□□□□□ -0.26
BBS4-204ENST00000562084 Q8N2B8 174 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms