RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 TMEM101Q96IK0 257 aa11□□□□□ -0.65
CDC42BPB-208ENST00000561271 LRP1Q07954 4544 aaKnown RBP11□□□□□ -0.65
CDC42BPB-208ENST00000561271 C7orf77A4D0Y5 90 aa10.99□□□□□ -0.65
CDC42BPB-208ENST00000561271 XCL1P47992 114 aa10.99□□□□□ -0.65
CDC42BPB-208ENST00000561271 FOXI1Q12951 378 aa10.99□□□□□ -0.65
CDC42BPB-208ENST00000561271 SMIM27A0A1W2PRY6 76 aa10.98□□□□□ -0.65
CDC42BPB-208ENST00000561271 CAMPP49913 170 aa10.98□□□□□ -0.65
CDC42BPB-208ENST00000561271 CIRBPQ14011 172 aaKnown RBP10.98□□□□□ -0.65
CDC42BPB-208ENST00000561271 CFAP161Q6P656 301 aa10.98□□□□□ -0.65
CDC42BPB-208ENST00000561271 GVQW2A0A096LPI5 108 aaPredicted RBP10.97□□□□□ -0.65
CDC42BPB-208ENST00000561271 LINC00959A0A1B0GUT2 108 aa10.97□□□□□ -0.65
CDC42BPB-208ENST00000561271 CCL25O15444 150 aa10.97□□□□□ -0.65
CDC42BPB-208ENST00000561271 SUMO2P61956 95 aaKnown RBP10.97□□□□□ -0.65
CDC42BPB-208ENST00000561271 MRPL51Q4U2R6 128 aaKnown RBP10.97□□□□□ -0.65
CDC42BPB-208ENST00000561271 MRPL52Q86TS9 123 aaKnown RBP10.97□□□□□ -0.65
CDC42BPB-208ENST00000561271 FAT3Q8TDW7 4589 aa10.96□□□□□ -0.65
CDC42BPB-208ENST00000561271 KRTAP29-1A8MX34 341 aaPredicted RBP10.96□□□□□ -0.65
CDC42BPB-208ENST00000561271 FCER1GP30273 86 aa10.96□□□□□ -0.65
CDC42BPB-208ENST00000561271 FAM104BQ5XKR9 115 aa10.96□□□□□ -0.65
CDC42BPB-208ENST00000561271 SPACA4Q8TDM5 124 aa10.96□□□□□ -0.65
CDC42BPB-208ENST00000561271 VCYO14598 125 aa10.95□□□□□ -0.66
CDC42BPB-208ENST00000561271 HNRNPA3P51991 378 aaKnown RBP10.95□□□□□ -0.66
CDC42BPB-208ENST00000561271 MRPL54Q6P161 138 aaKnown RBP10.95□□□□□ -0.66
CDC42BPB-208ENST00000561271 SMDT1Q9H4I9 107 aa10.95□□□□□ -0.66
CDC42BPB-208ENST00000561271 CDC42SE2Q9NRR3 84 aa10.95□□□□□ -0.66
CDC42BPB-208ENST00000561271 PPP1R17O96001 155 aa10.94□□□□□ -0.66
CDC42BPB-208ENST00000561271 COX6A2Q02221 97 aa10.94□□□□□ -0.66
CDC42BPB-208ENST00000561271 ZNF664Q8N3J9 261 aa10.94□□□□□ -0.66
CDC42BPB-208ENST00000561271 A0A087WYN8 130 aa10.93□□□□□ -0.66
CDC42BPB-208ENST00000561271 PPP1R2P9O14990 202 aa10.93□□□□□ -0.66
CDC42BPB-208ENST00000561271 SS18Q15532 418 aa10.93□□□□□ -0.66
CDC42BPB-208ENST00000561271 RNASE13Q5GAN3 156 aaKnown RBP10.93□□□□□ -0.66
CDC42BPB-208ENST00000561271 LINC00526Q96FQ7 95 aa10.93□□□□□ -0.66
CDC42BPB-208ENST00000561271 KIR2DL4Q99706 377 aa10.93□□□□□ -0.66
CDC42BPB-208ENST00000561271 A0A1B0GW15 77 aa10.92□□□□□ -0.66
CDC42BPB-208ENST00000561271 PRSS3P2Q8NHM4 247 aa10.92□□□□□ -0.66
CDC42BPB-208ENST00000561271 DPH3Q96FX2 82 aa10.92□□□□□ -0.66
CDC42BPB-208ENST00000561271 UBE2D4Q9Y2X8 147 aa10.92□□□□□ -0.66
CDC42BPB-208ENST00000561271 IGHV1-58A0A0C4DH39 117 aa10.91□□□□□ -0.66
CDC42BPB-208ENST00000561271 IGKV2-24A0A0C4DH68 120 aa10.91□□□□□ -0.66
CDC42BPB-208ENST00000561271 A0A1B0GXF2 115 aa10.91□□□□□ -0.66
CDC42BPB-208ENST00000561271 CKS2P33552 79 aa10.91□□□□□ -0.66
CDC42BPB-208ENST00000561271 HBBP68871 147 aa10.91□□□□□ -0.66
CDC42BPB-208ENST00000561271 Q6ZUT4 128 aa10.91□□□□□ -0.66
CDC42BPB-208ENST00000561271 D6R8Y8 96 aa10.9□□□□□ -0.66
CDC42BPB-208ENST00000561271 CD164L2Q6UWJ8 174 aa10.9□□□□□ -0.66
CDC42BPB-208ENST00000561271 LINC00862A6NCI5 91 aa10.89□□□□□ -0.67
CDC42BPB-208ENST00000561271 TNFRSF6BO95407 300 aa10.89□□□□□ -0.67
CDC42BPB-208ENST00000561271 NPYP01303 97 aa10.89□□□□□ -0.67
CDC42BPB-208ENST00000561271 C20orf78Q9BR46 151 aa10.89□□□□□ -0.67
CDC42BPB-208ENST00000561271 SMIM2Q9BVW6 85 aa10.89□□□□□ -0.67
CDC42BPB-208ENST00000561271 PLAC8Q9NZF1 115 aa10.89□□□□□ -0.67
CDC42BPB-208ENST00000561271 TRBV24-1A0A075B6N3 115 aa10.88□□□□□ -0.67
CDC42BPB-208ENST00000561271 A0A096LNI7 61 aa10.88□□□□□ -0.67
CDC42BPB-208ENST00000561271 S100A8P05109 93 aa10.88□□□□□ -0.67
CDC42BPB-208ENST00000561271 SMAGPQ0VAQ4 97 aa10.88□□□□□ -0.67
CDC42BPB-208ENST00000561271 MAJINQ3KP22 176 aa10.88□□□□□ -0.67
CDC42BPB-208ENST00000561271 CARD19Q96LW7 228 aa10.88□□□□□ -0.67
CDC42BPB-208ENST00000561271 CSDC2Q9Y534 153 aaKnown RBP10.88□□□□□ -0.67
CDC42BPB-208ENST00000561271 TRAV13-1A0A0B4J241 112 aa10.87□□□□□ -0.67
CDC42BPB-208ENST00000561271 F8W036 122 aa10.87□□□□□ -0.67
CDC42BPB-208ENST00000561271 RPL39P62891 51 aaKnown RBP10.87□□□□□ -0.67
CDC42BPB-208ENST00000561271 RPL32P62910 135 aaKnown RBP10.87□□□□□ -0.67
CDC42BPB-208ENST00000561271 C1orf196B1AJZ1 125 aa10.86□□□□□ -0.67
CDC42BPB-208ENST00000561271 OXTP01178 125 aa10.86□□□□□ -0.67
CDC42BPB-208ENST00000561271 TMEM18Q96B42 140 aa10.86□□□□□ -0.67
CDC42BPB-208ENST00000561271 TIMM21Q9BVV7 248 aa10.86□□□□□ -0.67
CDC42BPB-208ENST00000561271 ZNF561-AS1K7EIQ3 104 aa10.85□□□□□ -0.67
CDC42BPB-208ENST00000561271 COX7A2LO14548 114 aa10.85□□□□□ -0.67
CDC42BPB-208ENST00000561271 PHOX2AO14813 284 aa10.85□□□□□ -0.67
CDC42BPB-208ENST00000561271 TCAPO15273 167 aa10.84□□□□□ -0.67
CDC42BPB-208ENST00000561271 MALP21145 153 aa10.84□□□□□ -0.67
CDC42BPB-208ENST00000561271 SYCNQ0VAF6 134 aa10.84□□□□□ -0.67
CDC42BPB-208ENST00000561271 ATP5L2Q7Z4Y8 100 aa10.84□□□□□ -0.67
CDC42BPB-208ENST00000561271 STPG4Q8N801 248 aa10.84□□□□□ -0.67
CDC42BPB-208ENST00000561271 C7orf33Q8WU49 177 aa10.83□□□□□ -0.68
CDC42BPB-208ENST00000561271 IGLV4-69A0A075B6H9 119 aa10.82□□□□□ -0.68
CDC42BPB-208ENST00000561271 PPBPP02775 128 aa10.82□□□□□ -0.68
CDC42BPB-208ENST00000561271 C5orf38Q86SI9 138 aa10.82□□□□□ -0.68
CDC42BPB-208ENST00000561271 ORMDL3Q8N138 153 aa10.82□□□□□ -0.68
CDC42BPB-208ENST00000561271 FAM104AQ969W3 186 aa10.82□□□□□ -0.68
CDC42BPB-208ENST00000561271 OPRPNQ99935 248 aaPredicted RBP10.82□□□□□ -0.68
CDC42BPB-208ENST00000561271 RAB14P61106 215 aa10.81□□□□□ -0.68
CDC42BPB-208ENST00000561271 PNRC1Q12796 327 aaPredicted RBP10.81□□□□□ -0.68
CDC42BPB-208ENST00000561271 Q6ZRU5 148 aa10.81□□□□□ -0.68
CDC42BPB-208ENST00000561271 PRELID3AQ96N28 172 aa10.81□□□□□ -0.68
CDC42BPB-208ENST00000561271 SPANXA1Q9NS26 97 aa10.81□□□□□ -0.68
CDC42BPB-208ENST00000561271 PKIGQ9Y2B9 76 aa10.81□□□□□ -0.68
CDC42BPB-208ENST00000561271 TMEM136Q6ZRR5 245 aa10.8□□□□□ -0.68
CDC42BPB-208ENST00000561271 CAMK2N2Q96S95 79 aa10.79□□□□□ -0.68
CDC42BPB-208ENST00000561271 IFITM10A6NMD0 228 aa10.78□□□□□ -0.68
CDC42BPB-208ENST00000561271 MT-ND4LP03901 98 aa10.78□□□□□ -0.68
CDC42BPB-208ENST00000561271 PRR3P79522 188 aaKnown RBP10.78□□□□□ -0.68
CDC42BPB-208ENST00000561271 SPAG11BQ08648 103 aa10.78□□□□□ -0.68
CDC42BPB-208ENST00000561271 ANAPC16Q96DE5 110 aa10.78□□□□□ -0.68
CDC42BPB-208ENST00000561271 LINC00474Q9P2X8 69 aa10.78□□□□□ -0.68
CDC42BPB-208ENST00000561271 APOMO95445 188 aa10.77□□□□□ -0.69
CDC42BPB-208ENST00000561271 PTTG1IPP53801 180 aa10.77□□□□□ -0.69
CDC42BPB-208ENST00000561271 MRPS36P82909 103 aaKnown RBP10.77□□□□□ -0.69
CDC42BPB-208ENST00000561271 GAGE2BQ13066 116 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms