RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 ST20Q9HBF5 79 aa10.85□□□□□ -0.67
CRTC3-208ENST00000560098 SS18Q15532 418 aa10.84□□□□□ -0.67
CRTC3-208ENST00000560098 SPINK6Q6UWN8 80 aa10.84□□□□□ -0.67
CRTC3-208ENST00000560098 BORCS7Q96B45 105 aa10.84□□□□□ -0.67
CRTC3-208ENST00000560098 TMEM242Q9NWH2 141 aa10.84□□□□□ -0.67
CRTC3-208ENST00000560098 RNF213Q63HN8 5207 aa10.84□□□□□ -0.67
CRTC3-208ENST00000560098 CT83Q5H943 113 aa10.84□□□□□ -0.67
CRTC3-208ENST00000560098 MRPL52Q86TS9 123 aaKnown RBP10.84□□□□□ -0.67
CRTC3-208ENST00000560098 CDC42SE2Q9NRR3 84 aa10.84□□□□□ -0.67
CRTC3-208ENST00000560098 A0A0J9YXV3 536 aa10.83□□□□□ -0.68
CRTC3-208ENST00000560098 CD164L2Q6UWJ8 174 aa10.83□□□□□ -0.68
CRTC3-208ENST00000560098 ZNF561-AS1K7EIQ3 104 aa10.82□□□□□ -0.68
CRTC3-208ENST00000560098 POLR2KP53803 58 aaKnown RBP10.82□□□□□ -0.68
CRTC3-208ENST00000560098 SYCNQ0VAF6 134 aa10.82□□□□□ -0.68
CRTC3-208ENST00000560098 REG3GQ6UW15 175 aa10.82□□□□□ -0.68
CRTC3-208ENST00000560098 ZNF664Q8N3J9 261 aa10.82□□□□□ -0.68
CRTC3-208ENST00000560098 TMEM191AQ9H0A3 160 aa10.82□□□□□ -0.68
CRTC3-208ENST00000560098 CEBPGP53567 150 aa10.81□□□□□ -0.68
CRTC3-208ENST00000560098 ODF1Q14990 250 aa10.81□□□□□ -0.68
CRTC3-208ENST00000560098 Q6ZRP5 223 aa10.81□□□□□ -0.68
CRTC3-208ENST00000560098 TRBV27A0A0K0K1C4 114 aa10.8□□□□□ -0.68
CRTC3-208ENST00000560098 A0A1B0GUT8 65 aa10.8□□□□□ -0.68
CRTC3-208ENST00000560098 C7orf77A4D0Y5 90 aa10.8□□□□□ -0.68
CRTC3-208ENST00000560098 KRTAP10-8P60410 259 aa10.8□□□□□ -0.68
CRTC3-208ENST00000560098 SRSF9Q13242 221 aaKnown RBP eCLIP10.8□□□□□ -0.68
CRTC3-208ENST00000560098 HIGD1CA8MV81 97 aa10.79□□□□□ -0.68
CRTC3-208ENST00000560098 RAB4AP20338 218 aa10.79□□□□□ -0.68
CRTC3-208ENST00000560098 CAMPP49913 170 aa10.79□□□□□ -0.68
CRTC3-208ENST00000560098 PTTG1IPP53801 180 aa10.79□□□□□ -0.68
CRTC3-208ENST00000560098 BLOC1S1P78537 153 aa10.79□□□□□ -0.68
CRTC3-208ENST00000560098 TSKUQ8WUA8 353 aa10.79□□□□□ -0.68
CRTC3-208ENST00000560098 ISOC2Q96AB3 205 aa10.78□□□□□ -0.68
CRTC3-208ENST00000560098 LOC107984640A0A0U1RRK4 108 aa10.77□□□□□ -0.68
CRTC3-208ENST00000560098 MALP21145 153 aa10.77□□□□□ -0.68
CRTC3-208ENST00000560098 ALKAL2Q6UX46 152 aa10.77□□□□□ -0.68
CRTC3-208ENST00000560098 AMN1Q8IY45 258 aa10.77□□□□□ -0.68
CRTC3-208ENST00000560098 IGLV4-69A0A075B6H9 119 aa10.76□□□□□ -0.69
CRTC3-208ENST00000560098 C1orf196B1AJZ1 125 aa10.76□□□□□ -0.69
CRTC3-208ENST00000560098 VCYO14598 125 aa10.76□□□□□ -0.69
CRTC3-208ENST00000560098 GAGE2BQ13066 116 aa10.76□□□□□ -0.69
CRTC3-208ENST00000560098 LINC01551Q86U37 167 aa10.76□□□□□ -0.69
CRTC3-208ENST00000560098 COX7A2LO14548 114 aa10.75□□□□□ -0.69
CRTC3-208ENST00000560098 FCER1GP30273 86 aa10.75□□□□□ -0.69
CRTC3-208ENST00000560098 SMIM7Q9BQ49 75 aa10.75□□□□□ -0.69
CRTC3-208ENST00000560098 CSDC2Q9Y534 153 aaKnown RBP10.75□□□□□ -0.69
CRTC3-208ENST00000560098 SMAGPQ0VAQ4 97 aa10.75□□□□□ -0.69
CRTC3-208ENST00000560098 NUP35Q8NFH5 326 aa10.75□□□□□ -0.69
CRTC3-208ENST00000560098 OSTCQ9NRP0 149 aa10.75□□□□□ -0.69
CRTC3-208ENST00000560098 UBE2D4Q9Y2X8 147 aa10.75□□□□□ -0.69
CRTC3-208ENST00000560098 A0A1W2PNN7 141 aa10.74□□□□□ -0.69
CRTC3-208ENST00000560098 SMKR1H3BMG3 65 aa10.74□□□□□ -0.69
CRTC3-208ENST00000560098 CAMK2N2Q96S95 79 aa10.74□□□□□ -0.69
CRTC3-208ENST00000560098 EIF5A2Q9GZV4 153 aaKnown RBP10.74□□□□□ -0.69
CRTC3-208ENST00000560098 APOMO95445 188 aa10.73□□□□□ -0.69
CRTC3-208ENST00000560098 PPP1R17O96001 155 aa10.73□□□□□ -0.69
CRTC3-208ENST00000560098 SUMO2P61956 95 aaKnown RBP10.73□□□□□ -0.69
CRTC3-208ENST00000560098 RIGQ13278 110 aa10.73□□□□□ -0.69
CRTC3-208ENST00000560098 RNASE13Q5GAN3 156 aaKnown RBP10.73□□□□□ -0.69
CRTC3-208ENST00000560098 NRACQ8N912 160 aa10.73□□□□□ -0.69
CRTC3-208ENST00000560098 KIR2DL4Q99706 377 aa10.73□□□□□ -0.69
CRTC3-208ENST00000560098 TRAV13-1A0A0B4J241 112 aa10.72□□□□□ -0.69
CRTC3-208ENST00000560098 ZNF727A8MUV8 499 aa10.72□□□□□ -0.69
CRTC3-208ENST00000560098 C2orf48Q96LS8 159 aa10.72□□□□□ -0.69
CRTC3-208ENST00000560098 V9GYV3 84 aa10.71□□□□□ -0.69
CRTC3-208ENST00000560098 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.7□□□□□ -0.7
CRTC3-208ENST00000560098 C9orf116Q5BN46 136 aaPredicted RBP10.7□□□□□ -0.7
CRTC3-208ENST00000560098 C5orf38Q86SI9 138 aa10.7□□□□□ -0.7
CRTC3-208ENST00000560098 PPP1R2P9O14990 202 aa10.69□□□□□ -0.7
CRTC3-208ENST00000560098 Q6ZUT4 128 aa10.69□□□□□ -0.7
CRTC3-208ENST00000560098 PSORS1C2Q9UIG4 136 aa10.69□□□□□ -0.7
CRTC3-208ENST00000560098 SRP19P09132 144 aaKnown RBP10.68□□□□□ -0.7
CRTC3-208ENST00000560098 RPL18AQ02543 176 aaKnown RBP10.68□□□□□ -0.7
CRTC3-208ENST00000560098 AKAP14Q86UN6 197 aa10.68□□□□□ -0.7
CRTC3-208ENST00000560098 TMEM18Q96B42 140 aa10.68□□□□□ -0.7
CRTC3-208ENST00000560098 TIMM21Q9BVV7 248 aa10.68□□□□□ -0.7
CRTC3-208ENST00000560098 MT-ND6P03923 174 aa10.67□□□□□ -0.7
CRTC3-208ENST00000560098 SPAG11BQ08648 103 aa10.67□□□□□ -0.7
CRTC3-208ENST00000560098 MRPL51Q4U2R6 128 aaKnown RBP10.67□□□□□ -0.7
CRTC3-208ENST00000560098 NAT8BQ9UHF3 227 aa10.67□□□□□ -0.7
CRTC3-208ENST00000560098 RNF151Q2KHN1 245 aa10.67□□□□□ -0.7
CRTC3-208ENST00000560098 FAM104BQ5XKR9 115 aa10.67□□□□□ -0.7
CRTC3-208ENST00000560098 OPRPNQ99935 248 aaPredicted RBP10.67□□□□□ -0.7
CRTC3-208ENST00000560098 C1orf137Q5JT78 98 aa10.66□□□□□ -0.7
CRTC3-208ENST00000560098 PHF5AQ7RTV0 110 aaKnown RBP10.66□□□□□ -0.7
CRTC3-208ENST00000560098 OR10D4PQ8NGN7 298 aa10.66□□□□□ -0.7
CRTC3-208ENST00000560098 C20orf78Q9BR46 151 aa10.66□□□□□ -0.7
CRTC3-208ENST00000560098 LINC00862A6NCI5 91 aa10.65□□□□□ -0.7
CRTC3-208ENST00000560098 TRBV24-1A0A075B6N3 115 aa10.64□□□□□ -0.71
CRTC3-208ENST00000560098 TMEM241Q24JQ0 296 aa10.64□□□□□ -0.71
CRTC3-208ENST00000560098 MRPL35Q9NZE8 188 aaKnown RBP10.64□□□□□ -0.71
CRTC3-208ENST00000560098 TCAPO15273 167 aa10.63□□□□□ -0.71
CRTC3-208ENST00000560098 RPL23P62829 140 aaKnown RBP10.63□□□□□ -0.71
CRTC3-208ENST00000560098 RPL39P62891 51 aaKnown RBP10.63□□□□□ -0.71
CRTC3-208ENST00000560098 RPL32P62910 135 aaKnown RBP10.63□□□□□ -0.71
CRTC3-208ENST00000560098 FAM74A3Q4VXF1 159 aa10.63□□□□□ -0.71
CRTC3-208ENST00000560098 F8WDY8 70 aa10.62□□□□□ -0.71
CRTC3-208ENST00000560098 CKS2P33552 79 aa10.62□□□□□ -0.71
CRTC3-208ENST00000560098 ORAOV1Q8WV07 137 aa10.62□□□□□ -0.71
CRTC3-208ENST00000560098 FAM104AQ969W3 186 aa10.62□□□□□ -0.71
CRTC3-208ENST00000560098 IGHV3OR16-9A0A0B4J2B5 98 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms