RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 LOC285556D6RIA3 1793 aa2.72□□□□□ -1.97
ATXN3-248ENST00000558190 IGKV2D-24A0A075B6R9 120 aa2.72□□□□□ -1.97
ATXN3-248ENST00000558190 LY6G6EA0A0G2JKS1 128 aa2.72□□□□□ -1.97
ATXN3-248ENST00000558190 U3KQA8 63 aa2.72□□□□□ -1.97
ATXN3-248ENST00000558190 C6orf99Q4VX62 202 aa2.72□□□□□ -1.97
ATXN3-248ENST00000558190 MYLKQ15746 1914 aa2.72□□□□□ -1.97
ATXN3-248ENST00000558190 CRYGAP11844 174 aa2.72□□□□□ -1.97
ATXN3-248ENST00000558190 MAPK1IP1LQ8NDC0 245 aa2.72□□□□□ -1.97
ATXN3-248ENST00000558190 SPATA3Q8NHX4 192 aa2.72□□□□□ -1.97
ATXN3-248ENST00000558190 PSCAO43653 123 aa2.72□□□□□ -1.97
ATXN3-248ENST00000558190 FAM19A3Q7Z5A8 133 aa2.72□□□□□ -1.97
ATXN3-248ENST00000558190 BCE1O60756 84 aa2.72□□□□□ -1.97
ATXN3-248ENST00000558190 Q6ZTI0 123 aa2.72□□□□□ -1.97
ATXN3-248ENST00000558190 A8MTW9 85 aa2.71□□□□□ -1.97
ATXN3-248ENST00000558190 LINC00208Q96KT6 92 aa2.71□□□□□ -1.97
ATXN3-248ENST00000558190 Q9UF83 564 aa2.71□□□□□ -1.97
ATXN3-248ENST00000558190 LINC00242Q5T6M2 205 aa2.71□□□□□ -1.98
ATXN3-248ENST00000558190 A0A0J9YX75 114 aa2.71□□□□□ -1.98
ATXN3-248ENST00000558190 BPESC1Q9GZL8 116 aa2.71□□□□□ -1.98
ATXN3-248ENST00000558190 A0A087WYN8 130 aa2.71□□□□□ -1.98
ATXN3-248ENST00000558190 M0R378 163 aa2.71□□□□□ -1.98
ATXN3-248ENST00000558190 IGLV4-3A0A075B6K6 122 aa2.71□□□□□ -1.98
ATXN3-248ENST00000558190 DEFB136Q30KP8 78 aa2.71□□□□□ -1.98
ATXN3-248ENST00000558190 WFDC10AQ9H1F0 79 aa2.71□□□□□ -1.98
ATXN3-248ENST00000558190 CDC42SE2Q9NRR3 84 aa2.71□□□□□ -1.98
ATXN3-248ENST00000558190 HIGD2AQ9BW72 106 aa2.71□□□□□ -1.98
ATXN3-248ENST00000558190 DEFB114Q30KQ6 69 aa2.71□□□□□ -1.98
ATXN3-248ENST00000558190 RNF138Q8WVD3 245 aa2.71□□□□□ -1.98
ATXN3-248ENST00000558190 DIRC1Q969H9 104 aa2.71□□□□□ -1.98
ATXN3-248ENST00000558190 BRCA1P38398 1863 aaKnown RBP2.71□□□□□ -1.98
ATXN3-248ENST00000558190 PLA2G2AP14555 144 aa2.71□□□□□ -1.98
ATXN3-248ENST00000558190 ABCA3Q99758 1704 aa2.71□□□□□ -1.98
ATXN3-248ENST00000558190 DKK4Q9UBT3 224 aa2.71□□□□□ -1.98
ATXN3-248ENST00000558190 DSCAMO60469 2012 aa2.71□□□□□ -1.98
ATXN3-248ENST00000558190 SLURP1P55000 103 aa2.71□□□□□ -1.98
ATXN3-248ENST00000558190 COL11A1P12107 1806 aaPredicted RBP2.71□□□□□ -1.98
ATXN3-248ENST00000558190 DNAJC9-AS1A6NH13 148 aa2.71□□□□□ -1.98
ATXN3-248ENST00000558190 ABCA12Q86UK0 2595 aa2.71□□□□□ -1.98
ATXN3-248ENST00000558190 LINC01547P58512 204 aaPredicted RBP2.7□□□□□ -1.98
ATXN3-248ENST00000558190 IGLV4-69A0A075B6H9 119 aa2.7□□□□□ -1.98
ATXN3-248ENST00000558190 COL5A3P25940 1745 aaPredicted RBP2.7□□□□□ -1.98
ATXN3-248ENST00000558190 HCG22E2RYF7 251 aa2.7□□□□□ -1.98
ATXN3-248ENST00000558190 SPART-AS1P0CW21 52 aa2.7□□□□□ -1.98
ATXN3-248ENST00000558190 LINC01561Q8N1V8 128 aa2.7□□□□□ -1.98
ATXN3-248ENST00000558190 PTPRDP23468 1912 aa2.7□□□□□ -1.98
ATXN3-248ENST00000558190 C9orf116Q5BN46 136 aaPredicted RBP2.7□□□□□ -1.98
ATXN3-248ENST00000558190 NRXN3Q9Y4C0 1643 aa2.7□□□□□ -1.98
ATXN3-248ENST00000558190 DLEC1Q9Y238 1755 aa2.7□□□□□ -1.98
ATXN3-248ENST00000558190 RNF223E7ERA6 249 aa2.7□□□□□ -1.98
ATXN3-248ENST00000558190 SCN7AQ01118 1682 aa2.7□□□□□ -1.98
ATXN3-248ENST00000558190 MSMBP08118 114 aa2.7□□□□□ -1.98
ATXN3-248ENST00000558190 NHSQ6T4R5 1651 aa2.7□□□□□ -1.98
ATXN3-248ENST00000558190 KMT2EQ8IZD2 1858 aa2.7□□□□□ -1.98
ATXN3-248ENST00000558190 BAHCC1Q9P281 2608 aa2.7□□□□□ -1.98
ATXN3-248ENST00000558190 LINC00959A0A1B0GUT2 108 aa2.7□□□□□ -1.98
ATXN3-248ENST00000558190 SERTAD4-AS1Q5TG53 156 aa2.7□□□□□ -1.98
ATXN3-248ENST00000558190 A0A096LNJ9 63 aa2.7□□□□□ -1.98
ATXN3-248ENST00000558190 K7ERS5 55 aa2.7□□□□□ -1.98
ATXN3-248ENST00000558190 Q8N3U1 123 aa2.7□□□□□ -1.98
ATXN3-248ENST00000558190 IGLV2-18A0A075B6J9 118 aa2.7□□□□□ -1.98
ATXN3-248ENST00000558190 C4orf48Q5BLP8 95 aa2.7□□□□□ -1.98
ATXN3-248ENST00000558190 THADAQ6YHU6 1953 aa2.7□□□□□ -1.98
ATXN3-248ENST00000558190 RPL37AP8A6NKH3 93 aa2.69□□□□□ -1.98
ATXN3-248ENST00000558190 IGLV1-47P01700 117 aa2.69□□□□□ -1.98
ATXN3-248ENST00000558190 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.69□□□□□ -1.98
ATXN3-248ENST00000558190 DAZAP2Q15038 168 aaPredicted RBP2.69□□□□□ -1.98
ATXN3-248ENST00000558190 C1orf64Q8NEQ6 169 aa2.69□□□□□ -1.98
ATXN3-248ENST00000558190 LIMD2Q9BT23 127 aa2.69□□□□□ -1.98
ATXN3-248ENST00000558190 H3BUA1 57 aa2.69□□□□□ -1.98
ATXN3-248ENST00000558190 HOXB4P17483 251 aaPredicted RBP2.69□□□□□ -1.98
ATXN3-248ENST00000558190 LINC01546A6NGU7 62 aa2.69□□□□□ -1.98
ATXN3-248ENST00000558190 IGFL3Q6UXB1 125 aa2.69□□□□□ -1.98
ATXN3-248ENST00000558190 PATJQ8NI35 1801 aa2.69□□□□□ -1.98
ATXN3-248ENST00000558190 KIAA0087Q14695 138 aa2.69□□□□□ -1.98
ATXN3-248ENST00000558190 SPAG11AQ6PDA7 123 aa2.69□□□□□ -1.98
ATXN3-248ENST00000558190 NCOA6Q14686 2063 aaPredicted RBP2.69□□□□□ -1.98
ATXN3-248ENST00000558190 LINC00575Q6W349 94 aa2.69□□□□□ -1.98
ATXN3-248ENST00000558190 IGHV4-61A0A0C4DH41 118 aa2.69□□□□□ -1.98
ATXN3-248ENST00000558190 TSPEAR-AS2P59090 65 aa2.69□□□□□ -1.98
ATXN3-248ENST00000558190 FAM215AQ9Y5M1 114 aa2.69□□□□□ -1.98
ATXN3-248ENST00000558190 FSTL3O95633 263 aa2.69□□□□□ -1.98
ATXN3-248ENST00000558190 K7EQD1 137 aa2.68□□□□□ -1.98
ATXN3-248ENST00000558190 UBE2DNLQ8IWF7 75 aa2.68□□□□□ -1.98
ATXN3-248ENST00000558190 C5orf56Q8N8D9 126 aa2.68□□□□□ -1.98
ATXN3-248ENST00000558190 Q6ZQY7 126 aa2.68□□□□□ -1.98
ATXN3-248ENST00000558190 UBR3Q6ZT12 1888 aa2.68□□□□□ -1.98
ATXN3-248ENST00000558190 ATP5EP56381 51 aaPredicted RBP2.68□□□□□ -1.98
ATXN3-248ENST00000558190 A6NDX4 124 aa2.68□□□□□ -1.98
ATXN3-248ENST00000558190 CYSRT1A8MQ03 144 aa2.68□□□□□ -1.98
ATXN3-248ENST00000558190 CD164L2Q6UWJ8 174 aa2.68□□□□□ -1.98
ATXN3-248ENST00000558190 TRBV6-4A0A1B0GX49 114 aa2.68□□□□□ -1.98
ATXN3-248ENST00000558190 TMEM254Q8TBM7 123 aa2.68□□□□□ -1.98
ATXN3-248ENST00000558190 DHRS4-AS1Q9P1J3 65 aa2.68□□□□□ -1.98
ATXN3-248ENST00000558190 ZNF73O43830 326 aaPredicted RBP2.68□□□□□ -1.98
ATXN3-248ENST00000558190 B9D2Q9BPU9 175 aa2.68□□□□□ -1.98
ATXN3-248ENST00000558190 SPAG11BQ08648 103 aa2.68□□□□□ -1.98
ATXN3-248ENST00000558190 REG3AQ06141 175 aa2.68□□□□□ -1.98
ATXN3-248ENST00000558190 TNRC6CQ9HCJ0 1690 aaKnown RBP2.68□□□□□ -1.98
ATXN3-248ENST00000558190 PCDH15Q96QU1 1955 aa2.68□□□□□ -1.98
ATXN3-248ENST00000558190 ESRGQ1W209 222 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms