RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 PRR34Q9NV39 138 aa7.1□□□□□ -1.27
TMEM260-206ENST00000555046 IGKV2D-24A0A075B6R9 120 aa7.09□□□□□ -1.27
TMEM260-206ENST00000555046 K7EMI3 77 aa7.09□□□□□ -1.27
TMEM260-206ENST00000555046 TSHBP01222 138 aa7.09□□□□□ -1.27
TMEM260-206ENST00000555046 FGF6P10767 208 aa7.09□□□□□ -1.27
TMEM260-206ENST00000555046 ESDP10768 282 aa7.09□□□□□ -1.27
TMEM260-206ENST00000555046 REG3AQ06141 175 aa7.09□□□□□ -1.27
TMEM260-206ENST00000555046 OR5A1Q8NGJ0 315 aa7.09□□□□□ -1.27
TMEM260-206ENST00000555046 DEFB104AQ8WTQ1 72 aa7.09□□□□□ -1.27
TMEM260-206ENST00000555046 SMIM2Q9BVW6 85 aa7.09□□□□□ -1.27
TMEM260-206ENST00000555046 MAP1LC3AQ9H492 121 aa7.09□□□□□ -1.27
TMEM260-206ENST00000555046 CSDC2Q9Y534 153 aaKnown RBP7.09□□□□□ -1.27
TMEM260-206ENST00000555046 NPYP01303 97 aa7.08□□□□□ -1.28
TMEM260-206ENST00000555046 ENHOQ6UWT2 76 aa7.08□□□□□ -1.28
TMEM260-206ENST00000555046 MRPL52Q86TS9 123 aaKnown RBP7.08□□□□□ -1.28
TMEM260-206ENST00000555046 Q8N3U1 123 aa7.08□□□□□ -1.28
TMEM260-206ENST00000555046 NXT2Q9NPJ8 142 aaKnown RBP7.08□□□□□ -1.28
TMEM260-206ENST00000555046 LRP1BQ9NZR2 4599 aa7.08□□□□□ -1.28
TMEM260-206ENST00000555046 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.07□□□□□ -1.28
TMEM260-206ENST00000555046 A0A087WTM6 91 aa7.07□□□□□ -1.28
TMEM260-206ENST00000555046 IGKV2-29A2NJV5 120 aaPredicted RBP7.07□□□□□ -1.28
TMEM260-206ENST00000555046 CCL25O15444 150 aa7.07□□□□□ -1.28
TMEM260-206ENST00000555046 C14orf177Q52M58 125 aa7.07□□□□□ -1.28
TMEM260-206ENST00000555046 CDPF1Q6NVV7 123 aa7.07□□□□□ -1.28
TMEM260-206ENST00000555046 SLC7A5P1Q8MH63 180 aa7.07□□□□□ -1.28
TMEM260-206ENST00000555046 C20orf203Q8NBC4 194 aa7.07□□□□□ -1.28
TMEM260-206ENST00000555046 SMCO4Q9NRQ5 59 aa7.07□□□□□ -1.28
TMEM260-206ENST00000555046 IGLV4-60A0A075B6I1 120 aa7.06□□□□□ -1.28
TMEM260-206ENST00000555046 FABP9Q0Z7S8 132 aa7.06□□□□□ -1.28
TMEM260-206ENST00000555046 ORMDL2Q53FV1 153 aa7.06□□□□□ -1.28
TMEM260-206ENST00000555046 Q8N8P6 123 aa7.06□□□□□ -1.28
TMEM260-206ENST00000555046 NTN5Q8WTR8 489 aaPredicted RBP7.06□□□□□ -1.28
TMEM260-206ENST00000555046 TIMM21Q9BVV7 248 aa7.06□□□□□ -1.28
TMEM260-206ENST00000555046 LOC389332A0A1B0GUA5 103 aa7.05□□□□□ -1.28
TMEM260-206ENST00000555046 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.05□□□□□ -1.28
TMEM260-206ENST00000555046 SPATA12Q7Z6I5 190 aa7.05□□□□□ -1.28
TMEM260-206ENST00000555046 ZNF664Q8N3J9 261 aa7.05□□□□□ -1.28
TMEM260-206ENST00000555046 MAPKAPK5-AS1Q8N8E1 139 aa7.05□□□□□ -1.28
TMEM260-206ENST00000555046 PRSS3P2Q8NHM4 247 aa7.05□□□□□ -1.28
TMEM260-206ENST00000555046 TRAPPC1Q9Y5R8 145 aa7.05□□□□□ -1.28
TMEM260-206ENST00000555046 LRCOL1A6NCL2 159 aa7.04□□□□□ -1.28
TMEM260-206ENST00000555046 LINC01549A6NIU2 74 aa7.04□□□□□ -1.28
TMEM260-206ENST00000555046 C16orf90A8MZG2 172 aa7.04□□□□□ -1.28
TMEM260-206ENST00000555046 SS18Q15532 418 aa7.04□□□□□ -1.28
TMEM260-206ENST00000555046 CFAP161Q6P656 301 aa7.04□□□□□ -1.28
TMEM260-206ENST00000555046 KRTAP9-2Q9BYQ4 174 aa7.04□□□□□ -1.28
TMEM260-206ENST00000555046 MRPL18Q9H0U6 180 aaKnown RBP7.04□□□□□ -1.28
TMEM260-206ENST00000555046 CDC42SE2Q9NRR3 84 aa7.04□□□□□ -1.28
TMEM260-206ENST00000555046 SPANXA1Q9NS26 97 aa7.04□□□□□ -1.28
TMEM260-206ENST00000555046 FLG2Q5D862 2391 aaPredicted RBP7.03□□□□□ -1.28
TMEM260-206ENST00000555046 TGIF2-C20orf24A0A0A6YYL0 155 aa7.03□□□□□ -1.28
TMEM260-206ENST00000555046 KIAA1644Q3SXP7 199 aa7.03□□□□□ -1.28
TMEM260-206ENST00000555046 Q8N814 137 aa7.03□□□□□ -1.28
TMEM260-206ENST00000555046 BAALCQ8WXS3 180 aa7.03□□□□□ -1.28
TMEM260-206ENST00000555046 UBE2D4Q9Y2X8 147 aa7.03□□□□□ -1.28
TMEM260-206ENST00000555046 IGKV3OR2-268A0A0C4DH90 116 aa7.02□□□□□ -1.29
TMEM260-206ENST00000555046 C1orf196B1AJZ1 125 aa7.02□□□□□ -1.29
TMEM260-206ENST00000555046 NPSP0C0P6 89 aa7.02□□□□□ -1.29
TMEM260-206ENST00000555046 IFI27P40305 119 aaPredicted RBP7.02□□□□□ -1.29
TMEM260-206ENST00000555046 PAPPA-AS1Q5QFB9 102 aa7.02□□□□□ -1.29
TMEM260-206ENST00000555046 CLPSL2Q6UWE3 100 aa7.02□□□□□ -1.29
TMEM260-206ENST00000555046 ALKBH7Q9BT30 221 aaPredicted RBP7.02□□□□□ -1.29
TMEM260-206ENST00000555046 CYSLTR1Q9Y271 337 aa7.02□□□□□ -1.29
TMEM260-206ENST00000555046 PYGO1Q9Y3Y4 419 aa7.02□□□□□ -1.29
TMEM260-206ENST00000555046 KRTAP9-6A0A140TA67 174 aa7.01□□□□□ -1.29
TMEM260-206ENST00000555046 RAB5BP61020 215 aa7.01□□□□□ -1.29
TMEM260-206ENST00000555046 MRPS36P82909 103 aaKnown RBP7.01□□□□□ -1.29
TMEM260-206ENST00000555046 IGLV10-54A0A075B6I4 117 aa7□□□□□ -1.29
TMEM260-206ENST00000555046 IGLV5-52A0A0A0MRZ9 124 aa7□□□□□ -1.29
TMEM260-206ENST00000555046 LINC00959A0A1B0GUT2 108 aa7□□□□□ -1.29
TMEM260-206ENST00000555046 Q6ZN92 141 aa7□□□□□ -1.29
TMEM260-206ENST00000555046 FA2HQ7L5A8 372 aa7□□□□□ -1.29
TMEM260-206ENST00000555046 CHCHD10Q8WYQ3 142 aaPredicted RBP7□□□□□ -1.29
TMEM260-206ENST00000555046 GAGE12HA6NDE8 117 aa6.99□□□□□ -1.29
TMEM260-206ENST00000555046 GCSHP23434 173 aa6.99□□□□□ -1.29
TMEM260-206ENST00000555046 KRTAP10-2P60368 255 aa6.99□□□□□ -1.29
TMEM260-206ENST00000555046 CD164L2Q6UWJ8 174 aa6.99□□□□□ -1.29
TMEM260-206ENST00000555046 C2orf66Q6UXQ4 117 aa6.99□□□□□ -1.29
TMEM260-206ENST00000555046 Q8N1X5 172 aa6.99□□□□□ -1.29
TMEM260-206ENST00000555046 AP5S1Q9NUS5 200 aa6.99□□□□□ -1.29
TMEM260-206ENST00000555046 RNF213Q63HN8 5207 aa6.99□□□□□ -1.29
TMEM260-206ENST00000555046 LINC01546A6NGU7 62 aa6.98□□□□□ -1.29
TMEM260-206ENST00000555046 USP17L23D6RBM5 183 aa6.98□□□□□ -1.29
TMEM260-206ENST00000555046 RPL39P62891 51 aaKnown RBP6.98□□□□□ -1.29
TMEM260-206ENST00000555046 KRTAP26-1Q6PEX3 210 aa6.98□□□□□ -1.29
TMEM260-206ENST00000555046 C2orf88Q9BSF0 95 aa6.98□□□□□ -1.29
TMEM260-206ENST00000555046 VCX2Q9H322 139 aa6.98□□□□□ -1.29
TMEM260-206ENST00000555046 TRAV13-1A0A0B4J241 112 aa6.97□□□□□ -1.29
TMEM260-206ENST00000555046 LECT2O14960 151 aa6.97□□□□□ -1.29
TMEM260-206ENST00000555046 LINC00614P0C842 121 aa6.97□□□□□ -1.29
TMEM260-206ENST00000555046 XCL1P47992 114 aa6.97□□□□□ -1.29
TMEM260-206ENST00000555046 TEX43Q6ZNM6 134 aa6.97□□□□□ -1.29
TMEM260-206ENST00000555046 CBLN2Q8IUK8 224 aa6.97□□□□□ -1.29
TMEM260-206ENST00000555046 TOMM6Q96B49 74 aa6.97□□□□□ -1.29
TMEM260-206ENST00000555046 TMEM141Q96I45 108 aa6.97□□□□□ -1.29
TMEM260-206ENST00000555046 YPEL4Q96NS1 127 aa6.97□□□□□ -1.29
TMEM260-206ENST00000555046 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.96□□□□□ -1.3
TMEM260-206ENST00000555046 APOMO95445 188 aa6.96□□□□□ -1.3
TMEM260-206ENST00000555046 MALP21145 153 aa6.96□□□□□ -1.3
TMEM260-206ENST00000555046 SEC11AP67812 179 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms