RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 ATXN8Q156A1 80 aa3.11□□□□□ -1.91
ATXN3-225ENST00000554214 ZNF726P1Q15940 193 aa3.11□□□□□ -1.91
ATXN3-225ENST00000554214 ABCA11PQ4W5N1 156 aa3.11□□□□□ -1.91
ATXN3-225ENST00000554214 C1orf100Q5SVJ3 147 aa3.11□□□□□ -1.91
ATXN3-225ENST00000554214 C11orf71Q6IPW1 123 aa3.11□□□□□ -1.91
ATXN3-225ENST00000554214 MARCH3Q86UD3 253 aa3.11□□□□□ -1.91
ATXN3-225ENST00000554214 PCP2Q8IVA1 136 aa3.11□□□□□ -1.91
ATXN3-225ENST00000554214 ARL17AQ8IVW1 177 aa3.11□□□□□ -1.91
ATXN3-225ENST00000554214 OR8A1Q8NGG7 326 aa3.11□□□□□ -1.91
ATXN3-225ENST00000554214 RFESDQ8TAC1 157 aa3.11□□□□□ -1.91
ATXN3-225ENST00000554214 ZNF799Q96GE5 643 aa3.11□□□□□ -1.91
ATXN3-225ENST00000554214 C16orf74Q96GX8 76 aa3.11□□□□□ -1.91
ATXN3-225ENST00000554214 HIST1H4GQ99525 98 aa3.11□□□□□ -1.91
ATXN3-225ENST00000554214 UPK3BQ9BT76 320 aa3.11□□□□□ -1.91
ATXN3-225ENST00000554214 TMEM243Q9BU79 118 aa3.11□□□□□ -1.91
ATXN3-225ENST00000554214 SLC25A15Q9Y619 301 aa3.11□□□□□ -1.91
ATXN3-225ENST00000554214 TMEM14AQ9Y6G1 99 aa3.11□□□□□ -1.91
ATXN3-225ENST00000554214 V9GYV3 84 aa3.11□□□□□ -1.91
ATXN3-225ENST00000554214 TRBV25-1A0A075B6N4 114 aa3.1□□□□□ -1.91
ATXN3-225ENST00000554214 TRBV10-2A0A0K0K1G8 114 aa3.1□□□□□ -1.91
ATXN3-225ENST00000554214 C8orf87E5RJ46 101 aa3.1□□□□□ -1.91
ATXN3-225ENST00000554214 SLC25A16P16260 332 aa3.1□□□□□ -1.91
ATXN3-225ENST00000554214 EFNA4P52798 201 aa3.1□□□□□ -1.91
ATXN3-225ENST00000554214 MIC13Q5XKP0 118 aa3.1□□□□□ -1.91
ATXN3-225ENST00000554214 C14orf178Q8N769 122 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-225ENST00000554214 BPESC1Q9GZL8 116 aa3.1□□□□□ -1.91
ATXN3-225ENST00000554214 C11orf68Q9H3H3 251 aaKnown RBP3.1□□□□□ -1.91
ATXN3-225ENST00000554214 PCLOQ9Y6V0 5065 aa3.1□□□□□ -1.91
ATXN3-225ENST00000554214 TRBV20OR9-2A0A075B6H5 130 aa3.09□□□□□ -1.91
ATXN3-225ENST00000554214 IGHV3-15A0A0B4J1V0 119 aa3.09□□□□□ -1.91
ATXN3-225ENST00000554214 A0A0B4J2C4 111 aa3.09□□□□□ -1.91
ATXN3-225ENST00000554214 F6UB75 175 aa3.09□□□□□ -1.91
ATXN3-225ENST00000554214 INS-IGF2F8WCM5 200 aa3.09□□□□□ -1.91
ATXN3-225ENST00000554214 H3BP45 60 aa3.09□□□□□ -1.91
ATXN3-225ENST00000554214 TIMM17BO60830 172 aa3.09□□□□□ -1.91
ATXN3-225ENST00000554214 NCBP2P52298 156 aaKnown RBP eCLIP3.09□□□□□ -1.915e-7■■■■□ 25.1
ATXN3-225ENST00000554214 ZFP2Q6ZN57 461 aa3.09□□□□□ -1.91
ATXN3-225ENST00000554214 RPP25LQ8N5L8 163 aaKnown RBP3.09□□□□□ -1.91
ATXN3-225ENST00000554214 ZNF702PQ9H963 129 aa3.09□□□□□ -1.91
ATXN3-225ENST00000554214 TAS2R4Q9NYW5 299 aa3.09□□□□□ -1.91
ATXN3-225ENST00000554214 ZNF492Q9P255 531 aa3.09□□□□□ -1.91
ATXN3-225ENST00000554214 TP73-AS1Q9UF72 201 aa3.09□□□□□ -1.91
ATXN3-225ENST00000554214 CADP27708 2225 aa3.09□□□□□ -1.91
ATXN3-225ENST00000554214 TRAV3A0A0B4J244 114 aa3.08□□□□□ -1.92
ATXN3-225ENST00000554214 A0A1B0GXF2 115 aa3.08□□□□□ -1.92
ATXN3-225ENST00000554214 C19orf71A6NCJ1 209 aa3.08□□□□□ -1.92
ATXN3-225ENST00000554214 PEX7O00628 323 aa3.08□□□□□ -1.92
ATXN3-225ENST00000554214 IFI6P09912 130 aa3.08□□□□□ -1.92
ATXN3-225ENST00000554214 ZNF823P16415 610 aa3.08□□□□□ -1.92
ATXN3-225ENST00000554214 CKS2P33552 79 aa3.08□□□□□ -1.92
ATXN3-225ENST00000554214 UBE2D1P51668 147 aa3.08□□□□□ -1.92
ATXN3-225ENST00000554214 UBE2BP63146 152 aa3.08□□□□□ -1.92
ATXN3-225ENST00000554214 FAM222AQ5U5X8 452 aa3.08□□□□□ -1.92
ATXN3-225ENST00000554214 LCA10Q71F78 164 aa3.08□□□□□ -1.92
ATXN3-225ENST00000554214 CLECL1Q8IZS7 167 aa3.08□□□□□ -1.92
ATXN3-225ENST00000554214 TMEM75Q8N9X5 138 aa3.08□□□□□ -1.92
ATXN3-225ENST00000554214 SPTSSAQ969W0 71 aa3.08□□□□□ -1.92
ATXN3-225ENST00000554214 TOMM6Q96B49 74 aa3.08□□□□□ -1.92
ATXN3-225ENST00000554214 TRBV7-3A0A075B6L6 115 aa3.07□□□□□ -1.92
ATXN3-225ENST00000554214 TMSB15BA0A087X1C1 80 aa3.07□□□□□ -1.92
ATXN3-225ENST00000554214 TRAV41A0A0B4J266 112 aa3.07□□□□□ -1.92
ATXN3-225ENST00000554214 RBMY1BA6NDE4 496 aaKnown RBP3.07□□□□□ -1.92
ATXN3-225ENST00000554214 RBMY1EA6NEQ0 496 aaKnown RBP3.07□□□□□ -1.92
ATXN3-225ENST00000554214 M0R378 163 aa3.07□□□□□ -1.92
ATXN3-225ENST00000554214 ZNF73O43830 326 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-225ENST00000554214 IGLV1-47P01700 117 aa3.07□□□□□ -1.92
ATXN3-225ENST00000554214 RBMY1DP0C7P1 496 aaKnown RBP3.07□□□□□ -1.92
ATXN3-225ENST00000554214 RBMY1A1P0DJD3 496 aaKnown RBP3.07□□□□□ -1.92
ATXN3-225ENST00000554214 RBMY1CP0DJD4 496 aa3.07□□□□□ -1.92
ATXN3-225ENST00000554214 ZNF32P17041 273 aa3.07□□□□□ -1.92
ATXN3-225ENST00000554214 IGHV1-2P23083 117 aa3.07□□□□□ -1.92
ATXN3-225ENST00000554214 NPPCP23582 126 aa3.07□□□□□ -1.92
ATXN3-225ENST00000554214 MYCNOSP40205 109 aa3.07□□□□□ -1.92
ATXN3-225ENST00000554214 IFI27P40305 119 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-225ENST00000554214 RBMY1FQ15415 496 aaKnown RBP3.07□□□□□ -1.92
ATXN3-225ENST00000554214 SLC48A1Q6P1K1 146 aa3.07□□□□□ -1.92
ATXN3-225ENST00000554214 SDIM1Q6ZPB5 146 aa3.07□□□□□ -1.92
ATXN3-225ENST00000554214 FP248Q71RG6 208 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-225ENST00000554214 PHF5AQ7RTV0 110 aaKnown RBP3.07□□□□□ -1.92
ATXN3-225ENST00000554214 NDUFA11Q86Y39 141 aa3.07□□□□□ -1.92
ATXN3-225ENST00000554214 TENM3Q9P273 2699 aa3.06□□□□□ -1.92
ATXN3-225ENST00000554214 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.06□□□□□ -1.92
ATXN3-225ENST00000554214 LINC01549A6NIU2 74 aa3.06□□□□□ -1.92
ATXN3-225ENST00000554214 CPSF4LA6NMK7 179 aaKnown RBP3.06□□□□□ -1.92
ATXN3-225ENST00000554214 PANO1I0J062 215 aa3.06□□□□□ -1.92
ATXN3-225ENST00000554214 CCKP06307 115 aa3.06□□□□□ -1.92
ATXN3-225ENST00000554214 COX6CP09669 75 aa3.06□□□□□ -1.92
ATXN3-225ENST00000554214 RNASE2P10153 161 aaKnown RBP3.06□□□□□ -1.92
ATXN3-225ENST00000554214 FCER1GP30273 86 aa3.06□□□□□ -1.92
ATXN3-225ENST00000554214 CACNG7P62955 275 aa3.06□□□□□ -1.92
ATXN3-225ENST00000554214 RBM3P98179 157 aaKnown RBP3.06□□□□□ -1.92
ATXN3-225ENST00000554214 ARFGEF3Q5TH69 2177 aa3.06□□□□□ -1.92
ATXN3-225ENST00000554214 CEMP1Q6PRD7 247 aaPredicted RBP3.06□□□□□ -1.92
ATXN3-225ENST00000554214 C2orf82Q6UX34 121 aa3.06□□□□□ -1.92
ATXN3-225ENST00000554214 CLEC19AQ6UXS0 136 aa3.06□□□□□ -1.92
ATXN3-225ENST00000554214 LYZL2Q7Z4W2 148 aa3.06□□□□□ -1.92
ATXN3-225ENST00000554214 MDP1Q86V88 176 aa3.06□□□□□ -1.92
ATXN3-225ENST00000554214 DAND5Q8N907 189 aa3.06□□□□□ -1.92
ATXN3-225ENST00000554214 DYNLRB2Q8TF09 96 aa3.06□□□□□ -1.92
ATXN3-225ENST00000554214 PGLYRP4Q96LB8 373 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms