RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 C20orf202A1L168 122 aa10.02□□□□□ -0.81
SHMT2-208ENST00000553868 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-208ENST00000553868 DEFB104AQ8WTQ1 72 aa10.02□□□□□ -0.81
SHMT2-208ENST00000553868 TMEM141Q96I45 108 aa10.02□□□□□ -0.81
SHMT2-208ENST00000553868 TRBV6-8A0A0A6YYG3 113 aa10.01□□□□□ -0.81
SHMT2-208ENST00000553868 H7C423 109 aa10.01□□□□□ -0.81
SHMT2-208ENST00000553868 NPSP0C0P6 89 aa10.01□□□□□ -0.81
SHMT2-208ENST00000553868 C3orf79P0CE67 100 aa10.01□□□□□ -0.81
SHMT2-208ENST00000553868 PAPPA-AS1Q5QFB9 102 aa10.01□□□□□ -0.81
SHMT2-208ENST00000553868 TIMM17AQ99595 171 aa10.01□□□□□ -0.81
SHMT2-208ENST00000553868 CHCHD7Q9BUK0 85 aa10.01□□□□□ -0.81
SHMT2-208ENST00000553868 SPANXA1Q9NS26 97 aa10.01□□□□□ -0.81
SHMT2-208ENST00000553868 UBE2L6O14933 153 aa10□□□□□ -0.81
SHMT2-208ENST00000553868 PET117Q6UWS5 81 aa10□□□□□ -0.81
SHMT2-208ENST00000553868 Q6ZN92 141 aa10□□□□□ -0.81
SHMT2-208ENST00000553868 NTM-AS1Q6ZSK4 140 aa10□□□□□ -0.81
SHMT2-208ENST00000553868 C15orf53Q8NAA6 179 aa10□□□□□ -0.81
SHMT2-208ENST00000553868 TIMM21Q9BVV7 248 aa10□□□□□ -0.81
SHMT2-208ENST00000553868 PYGO1Q9Y3Y4 419 aa10□□□□□ -0.81
SHMT2-208ENST00000553868 A0A096LPF7 62 aa9.99□□□□□ -0.81
SHMT2-208ENST00000553868 SYS1-DBNDD2H3BUS1 97 aa9.99□□□□□ -0.81
SHMT2-208ENST00000553868 PRSS1P07477 247 aa9.99□□□□□ -0.81
SHMT2-208ENST00000553868 TIRAPP58753 221 aa9.99□□□□□ -0.81
SHMT2-208ENST00000553868 RPL39P62891 51 aaKnown RBP9.99□□□□□ -0.81
SHMT2-208ENST00000553868 LINC00173Q6ZV60 143 aa9.99□□□□□ -0.81
SHMT2-208ENST00000553868 Q8N1X5 172 aa9.99□□□□□ -0.81
SHMT2-208ENST00000553868 IGIPA6NJ69 53 aa9.98□□□□□ -0.81
SHMT2-208ENST00000553868 SMIM6P0DI80 62 aa9.98□□□□□ -0.81
SHMT2-208ENST00000553868 PKIAP61925 76 aa9.98□□□□□ -0.81
SHMT2-208ENST00000553868 JOSD1Q15040 202 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-208ENST00000553868 DGAT2L7PQ6IED9 249 aa9.98□□□□□ -0.81
SHMT2-208ENST00000553868 SPATA12Q7Z6I5 190 aa9.98□□□□□ -0.81
SHMT2-208ENST00000553868 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-208ENST00000553868 IGKV2-29A2NJV5 120 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-208ENST00000553868 M0R2N4 97 aa9.97□□□□□ -0.81
SHMT2-208ENST00000553868 SCGB1D1O95968 90 aa9.97□□□□□ -0.81
SHMT2-208ENST00000553868 AMMECR1LQ6DCA0 310 aa9.97□□□□□ -0.81
SHMT2-208ENST00000553868 MRPL52Q86TS9 123 aaKnown RBP9.97□□□□□ -0.81
SHMT2-208ENST00000553868 CHCHD5Q9BSY4 110 aa9.97□□□□□ -0.81
SHMT2-208ENST00000553868 H0Y8G0 127 aa9.96□□□□□ -0.82
SHMT2-208ENST00000553868 ZNF25P17030 456 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-208ENST00000553868 LELP1Q5T871 98 aa9.96□□□□□ -0.82
SHMT2-208ENST00000553868 TMEM101Q96IK0 257 aa9.96□□□□□ -0.82
SHMT2-208ENST00000553868 APLNQ9ULZ1 77 aa9.96□□□□□ -0.82
SHMT2-208ENST00000553868 UBE2D4Q9Y2X8 147 aa9.96□□□□□ -0.82
SHMT2-208ENST00000553868 CSDC2Q9Y534 153 aaKnown RBP9.96□□□□□ -0.82
SHMT2-208ENST00000553868 MYCBP2O75592 4640 aa9.95□□□□□ -0.82
SHMT2-208ENST00000553868 TRAV12-1A0A0B4J245 112 aa9.95□□□□□ -0.82
SHMT2-208ENST00000553868 CDK2AP2O75956 126 aa9.95□□□□□ -0.82
SHMT2-208ENST00000553868 FGF6P10767 208 aa9.95□□□□□ -0.82
SHMT2-208ENST00000553868 OR5A1Q8NGJ0 315 aa9.95□□□□□ -0.82
SHMT2-208ENST00000553868 VCX2Q9H322 139 aa9.95□□□□□ -0.82
SHMT2-208ENST00000553868 TRAV8-6A0A0B4J262 113 aa9.94□□□□□ -0.82
SHMT2-208ENST00000553868 MRPS36P82909 103 aaKnown RBP9.94□□□□□ -0.82
SHMT2-208ENST00000553868 PMVKQ15126 192 aa9.94□□□□□ -0.82
SHMT2-208ENST00000553868 PYY3Q5JQD4 70 aa9.94□□□□□ -0.82
SHMT2-208ENST00000553868 BAALCQ8WXS3 180 aa9.94□□□□□ -0.82
SHMT2-208ENST00000553868 IGLV4-3A0A075B6K6 122 aa9.93□□□□□ -0.82
SHMT2-208ENST00000553868 IGLL5B9A064 214 aa9.93□□□□□ -0.82
SHMT2-208ENST00000553868 GAGE6Q13070 117 aa9.93□□□□□ -0.82
SHMT2-208ENST00000553868 LINC01545Q5VT33 79 aa9.93□□□□□ -0.82
SHMT2-208ENST00000553868 LYPD5Q6UWN5 251 aa9.93□□□□□ -0.82
SHMT2-208ENST00000553868 A0A087WX48 190 aa9.92□□□□□ -0.82
SHMT2-208ENST00000553868 TEX43Q6ZNM6 134 aa9.92□□□□□ -0.82
SHMT2-208ENST00000553868 C2orf88Q9BSF0 95 aa9.92□□□□□ -0.82
SHMT2-208ENST00000553868 C16orf90A8MZG2 172 aa9.91□□□□□ -0.82
SHMT2-208ENST00000553868 TMEM262E9PQX1 116 aa9.91□□□□□ -0.82
SHMT2-208ENST00000553868 CST9LQ9H4G1 147 aa9.91□□□□□ -0.82
SHMT2-208ENST00000553868 CHTOPQ9Y3Y2 248 aaKnown RBP9.91□□□□□ -0.82
SHMT2-208ENST00000553868 A0A1B0GUV1 79 aa9.9□□□□□ -0.82
SHMT2-208ENST00000553868 F8VRH5 84 aa9.9□□□□□ -0.82
SHMT2-208ENST00000553868 PLNP26678 52 aa9.9□□□□□ -0.82
SHMT2-208ENST00000553868 ODF1Q14990 250 aa9.9□□□□□ -0.82
SHMT2-208ENST00000553868 Q6ZUT4 128 aa9.9□□□□□ -0.82
SHMT2-208ENST00000553868 ZNF664Q8N3J9 261 aa9.9□□□□□ -0.82
SHMT2-208ENST00000553868 Q8N976 141 aa9.9□□□□□ -0.82
SHMT2-208ENST00000553868 DPM2O94777 84 aa9.89□□□□□ -0.83
SHMT2-208ENST00000553868 TCTAP57738 103 aa9.89□□□□□ -0.83
SHMT2-208ENST00000553868 S100A12P80511 92 aa9.89□□□□□ -0.83
SHMT2-208ENST00000553868 AMELXQ99217 191 aa9.89□□□□□ -0.83
SHMT2-208ENST00000553868 OPRPNQ99935 248 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-208ENST00000553868 CDC42SE2Q9NRR3 84 aa9.89□□□□□ -0.83
SHMT2-208ENST00000553868 FAT1Q14517 4588 aa9.89□□□□□ -0.83
SHMT2-208ENST00000553868 CCL18P55774 89 aa9.88□□□□□ -0.83
SHMT2-208ENST00000553868 C12orf57Q99622 126 aa9.88□□□□□ -0.83
SHMT2-208ENST00000553868 MRPL35Q9NZE8 188 aaKnown RBP9.88□□□□□ -0.83
SHMT2-208ENST00000553868 SRRM2Q9UQ35 2752 aaKnown RBP9.88□□□□□ -0.83
SHMT2-208ENST00000553868 HSBP1L1C9JCN9 74 aa9.87□□□□□ -0.83
SHMT2-208ENST00000553868 IGKCP01834 107 aa9.87□□□□□ -0.83
SHMT2-208ENST00000553868 RBX1P62877 108 aa9.87□□□□□ -0.83
SHMT2-208ENST00000553868 SEC11AP67812 179 aa9.87□□□□□ -0.83
SHMT2-208ENST00000553868 ESRGQ1W209 222 aa9.87□□□□□ -0.83
SHMT2-208ENST00000553868 LINC00518Q8N0U6 118 aa9.87□□□□□ -0.83
SHMT2-208ENST00000553868 PMCHL2Q9BQD1 86 aa9.87□□□□□ -0.83
SHMT2-208ENST00000553868 MPV17L2Q567V2 206 aa9.86□□□□□ -0.83
SHMT2-208ENST00000553868 VAMP8Q9BV40 100 aa9.86□□□□□ -0.83
SHMT2-208ENST00000553868 FAM104AQ969W3 186 aa9.85□□□□□ -0.83
SHMT2-208ENST00000553868 MRPS16Q9Y3D3 137 aaKnown RBP9.85□□□□□ -0.83
SHMT2-208ENST00000553868 IGLV4-60A0A075B6I1 120 aa9.84□□□□□ -0.83
SHMT2-208ENST00000553868 TRAV9-2A0A087WT02 112 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms