RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 KRTAP10-11P60412 298 aa10.91□□□□□ -0.66
ABCD4-218ENST00000553486 VAMP3Q15836 100 aa10.91□□□□□ -0.66
ABCD4-218ENST00000553486 TM2D2Q9BX73 214 aa10.91□□□□□ -0.66
ABCD4-218ENST00000553486 A0A0J9YXV3 536 aa10.9□□□□□ -0.66
ABCD4-218ENST00000553486 PTTG1IPP53801 180 aa10.9□□□□□ -0.66
ABCD4-218ENST00000553486 EGFEM1PQ0D2K5 195 aa10.9□□□□□ -0.66
ABCD4-218ENST00000553486 FAM104AQ969W3 186 aa10.9□□□□□ -0.66
ABCD4-218ENST00000553486 HIST1H4GQ99525 98 aa10.9□□□□□ -0.66
ABCD4-218ENST00000553486 TIMM21Q9BVV7 248 aa10.9□□□□□ -0.66
ABCD4-218ENST00000553486 TRBV6-4A0A1B0GX49 114 aa10.89□□□□□ -0.67
ABCD4-218ENST00000553486 TMEM223A0PJW6 202 aa10.89□□□□□ -0.67
ABCD4-218ENST00000553486 SMIM13P0DJ93 91 aa10.89□□□□□ -0.67
ABCD4-218ENST00000553486 ZNF22P17026 224 aaPredicted RBP10.89□□□□□ -0.67
ABCD4-218ENST00000553486 UBE2D3P61077 147 aa10.89□□□□□ -0.67
ABCD4-218ENST00000553486 UBE2D2P62837 147 aa10.89□□□□□ -0.67
ABCD4-218ENST00000553486 CEMP1Q6PRD7 247 aaPredicted RBP10.89□□□□□ -0.67
ABCD4-218ENST00000553486 TRGV4A0A0C4DH28 118 aa10.88□□□□□ -0.67
ABCD4-218ENST00000553486 GAGE12JA6NER3 117 aa10.88□□□□□ -0.67
ABCD4-218ENST00000553486 SMIM9A6NGZ8 99 aa10.88□□□□□ -0.67
ABCD4-218ENST00000553486 FXYD2P54710 66 aa10.88□□□□□ -0.67
ABCD4-218ENST00000553486 MRPS36P82909 103 aaKnown RBP10.88□□□□□ -0.67
ABCD4-218ENST00000553486 GAGE4Q13068 117 aa10.88□□□□□ -0.67
ABCD4-218ENST00000553486 GAGE5Q13069 117 aa10.88□□□□□ -0.67
ABCD4-218ENST00000553486 UBE2V1Q13404 147 aa10.88□□□□□ -0.67
ABCD4-218ENST00000553486 GAGE13Q4V321 117 aa10.88□□□□□ -0.67
ABCD4-218ENST00000553486 SCGB1D4Q6XE38 83 aa10.88□□□□□ -0.67
ABCD4-218ENST00000553486 C9orf118A6NHY6 69 aa10.88□□□□□ -0.67
ABCD4-218ENST00000553486 LEPROTO15243 131 aa10.88□□□□□ -0.67
ABCD4-218ENST00000553486 SMAGPQ0VAQ4 97 aa10.88□□□□□ -0.67
ABCD4-218ENST00000553486 DEFB121Q5J5C9 76 aa10.88□□□□□ -0.67
ABCD4-218ENST00000553486 DGAT2L7PQ6IED9 249 aa10.88□□□□□ -0.67
ABCD4-218ENST00000553486 KIR2DL5BQ8NHK3 375 aa10.88□□□□□ -0.67
ABCD4-218ENST00000553486 LGALS3P17931 250 aaKnown RBP10.87□□□□□ -0.67
ABCD4-218ENST00000553486 J3QQQ9 107 aa10.86□□□□□ -0.67
ABCD4-218ENST00000553486 DNAH9Q9NYC9 4486 aa10.86□□□□□ -0.67
ABCD4-218ENST00000553486 TINCRA0A1B0GVN0 87 aa10.86□□□□□ -0.67
ABCD4-218ENST00000553486 RNASE13Q5GAN3 156 aaKnown RBP10.86□□□□□ -0.67
ABCD4-218ENST00000553486 Q6ZUT4 128 aa10.86□□□□□ -0.67
ABCD4-218ENST00000553486 PLEKHB2Q96CS7 222 aa10.86□□□□□ -0.67
ABCD4-218ENST00000553486 GTSF1LQ9H1H1 148 aa10.86□□□□□ -0.67
ABCD4-218ENST00000553486 APOC4P55056 127 aa10.85□□□□□ -0.67
ABCD4-218ENST00000553486 TSPEAR-AS2P59090 65 aa10.84□□□□□ -0.67
ABCD4-218ENST00000553486 FHL2Q14192 279 aa10.84□□□□□ -0.67
ABCD4-218ENST00000553486 AMMECR1LQ6DCA0 310 aa10.84□□□□□ -0.67
ABCD4-218ENST00000553486 RAB37Q96AX2 223 aa10.84□□□□□ -0.67
ABCD4-218ENST00000553486 CSDC2Q9Y534 153 aaKnown RBP10.84□□□□□ -0.67
ABCD4-218ENST00000553486 X6R8D5 127 aa10.84□□□□□ -0.67
ABCD4-218ENST00000553486 K7EP13 123 aa10.84□□□□□ -0.67
ABCD4-218ENST00000553486 CCL25O15444 150 aa10.84□□□□□ -0.67
ABCD4-218ENST00000553486 NTM-AS1Q6ZSK4 140 aa10.84□□□□□ -0.67
ABCD4-218ENST00000553486 LINC00612Q8N6U2 182 aa10.84□□□□□ -0.67
ABCD4-218ENST00000553486 NHP2Q9NX24 153 aaKnown RBP10.84□□□□□ -0.67
ABCD4-218ENST00000553486 RYR3Q15413 4870 aa10.83□□□□□ -0.68
ABCD4-218ENST00000553486 SRSF9Q13242 221 aaKnown RBP eCLIP10.83□□□□□ -0.68
ABCD4-218ENST00000553486 SBSPONQ8IVN8 264 aa10.83□□□□□ -0.68
ABCD4-218ENST00000553486 B9D2Q9BPU9 175 aa10.83□□□□□ -0.68
ABCD4-218ENST00000553486 A0A0J9YY99 117 aa10.82□□□□□ -0.68
ABCD4-218ENST00000553486 H3BUT2 72 aa10.82□□□□□ -0.68
ABCD4-218ENST00000553486 DEFB130BP0DP73 79 aa10.82□□□□□ -0.68
ABCD4-218ENST00000553486 DEFB130AP0DP74 79 aa10.82□□□□□ -0.68
ABCD4-218ENST00000553486 UBE2D1P51668 147 aa10.82□□□□□ -0.68
ABCD4-218ENST00000553486 TMEM243Q9BU79 118 aa10.82□□□□□ -0.68
ABCD4-218ENST00000553486 GEMIN7Q9H840 131 aaKnown RBP10.82□□□□□ -0.68
ABCD4-218ENST00000553486 UBE2L6O14933 153 aa10.81□□□□□ -0.68
ABCD4-218ENST00000553486 TIRAPP58753 221 aa10.81□□□□□ -0.68
ABCD4-218ENST00000553486 SPANXB1Q9NS25 103 aaPredicted RBP10.81□□□□□ -0.68
ABCD4-218ENST00000553486 LOC100131303A0A0U1RQF7 123 aa10.81□□□□□ -0.68
ABCD4-218ENST00000553486 TMEM238LA0A1B0GVL6 79 aa10.81□□□□□ -0.68
ABCD4-218ENST00000553486 A6NJY4 79 aa10.81□□□□□ -0.68
ABCD4-218ENST00000553486 H7C423 109 aa10.81□□□□□ -0.68
ABCD4-218ENST00000553486 IGHV3-64A0A075B6Q5 118 aa10.8□□□□□ -0.68
ABCD4-218ENST00000553486 LYRM9A8MSI8 78 aa10.8□□□□□ -0.68
ABCD4-218ENST00000553486 LINC00694P0DN24 101 aa10.8□□□□□ -0.68
ABCD4-218ENST00000553486 C12orf74Q32Q52 190 aa10.8□□□□□ -0.68
ABCD4-218ENST00000553486 IGHV1-58A0A0C4DH39 117 aa10.79□□□□□ -0.68
ABCD4-218ENST00000553486 IGHV3-30-3P0DP02 117 aa10.79□□□□□ -0.68
ABCD4-218ENST00000553486 OR5A1Q8NGJ0 315 aa10.79□□□□□ -0.68
ABCD4-218ENST00000553486 TMEM101Q96IK0 257 aa10.79□□□□□ -0.68
ABCD4-218ENST00000553486 DEFB135Q30KP9 77 aa10.79□□□□□ -0.68
ABCD4-218ENST00000553486 GTF2H5Q6ZYL4 71 aa10.79□□□□□ -0.68
ABCD4-218ENST00000553486 WWC2-AS2Q96NR7 200 aa10.79□□□□□ -0.68
ABCD4-218ENST00000553486 A0A1W2PPM0 123 aa10.78□□□□□ -0.68
ABCD4-218ENST00000553486 GAGE10A6NGK3 116 aa10.78□□□□□ -0.68
ABCD4-218ENST00000553486 K7ERJ3 54 aa10.78□□□□□ -0.68
ABCD4-218ENST00000553486 FAM19A3Q7Z5A8 133 aa10.78□□□□□ -0.68
ABCD4-218ENST00000553486 IGLV5-45A0A087WSX0 123 aa10.77□□□□□ -0.68
ABCD4-218ENST00000553486 A0A1B0GWB2 263 aa10.77□□□□□ -0.68
ABCD4-218ENST00000553486 HERVK_113P63121 156 aa10.77□□□□□ -0.68
ABCD4-218ENST00000553486 NAA38Q9BRA0 125 aaKnown RBP10.77□□□□□ -0.68
ABCD4-218ENST00000553486 CDC42SE2Q9NRR3 84 aa10.77□□□□□ -0.68
ABCD4-218ENST00000553486 STAB2Q8WWQ8 2551 aa10.77□□□□□ -0.69
ABCD4-218ENST00000553486 FABP2P12104 132 aa10.77□□□□□ -0.69
ABCD4-218ENST00000553486 FAM222AQ5U5X8 452 aa10.77□□□□□ -0.69
ABCD4-218ENST00000553486 VSIG2Q96IQ7 327 aa10.77□□□□□ -0.69
ABCD4-218ENST00000553486 TRAV8-3A0A0A6YYJ7 113 aa10.76□□□□□ -0.69
ABCD4-218ENST00000553486 SPINK8P0C7L1 97 aa10.76□□□□□ -0.69
ABCD4-218ENST00000553486 TRBV6-8A0A0A6YYG3 113 aa10.75□□□□□ -0.69
ABCD4-218ENST00000553486 CDKN2A-AS1Q9UH64 79 aa10.75□□□□□ -0.69
ABCD4-218ENST00000553486 PRO0255Q9UI72 69 aa10.75□□□□□ -0.69
ABCD4-218ENST00000553486 IGLL5B9A064 214 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms