RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 ELOBQ15370 118 aa2.09□□□□□ -2.07
ATXN3-217ENST00000553287 PHF5AQ7RTV0 110 aaKnown RBP2.09□□□□□ -2.07
ATXN3-217ENST00000553287 MCFD2Q8NI22 146 aa2.09□□□□□ -2.07
ATXN3-217ENST00000553287 SMIM4Q8WVI0 70 aa2.09□□□□□ -2.07
ATXN3-217ENST00000553287 DIRAS2Q96HU8 199 aa2.09□□□□□ -2.07
ATXN3-217ENST00000553287 PRRT1Q99946 306 aa2.09□□□□□ -2.07
ATXN3-217ENST00000553287 NMES1Q9C002 83 aa2.09□□□□□ -2.07
ATXN3-217ENST00000553287 TMEM14CQ9P0S9 112 aa2.09□□□□□ -2.07
ATXN3-217ENST00000553287 FLVCR2Q9UPI3 526 aa2.09□□□□□ -2.07
ATXN3-217ENST00000553287 LSM5Q9Y4Y9 91 aaKnown RBP2.09□□□□□ -2.07
ATXN3-217ENST00000553287 SYNE2Q8WXH0 6885 aaKnown RBP2.08□□□□□ -2.08
ATXN3-217ENST00000553287 TMSB15BA0A087X1C1 80 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.08□□□□□ -2.08
ATXN3-217ENST00000553287 MUC21A0A140T8X8 626 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 DUXBA0A1W2PPF3 345 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 IGSF23A1L1A6 192 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 HSBP1L1C9JCN9 74 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 M0R036 132 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 OR7C2O60412 319 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 GCGP01275 180 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 IFNA7P01567 189 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 MT-ND6P03923 174 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 SLC25A6P12236 298 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 S100A5P33763 92 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 CSN1S1P47710 185 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 PDE6HQ13956 83 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 MIAQ16674 131 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 IAH1Q2TAA2 248 aaPredicted RBP2.08□□□□□ -2.08
ATXN3-217ENST00000553287 TMEM128Q5BJH2 165 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 TEX43Q6ZNM6 134 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 ZNF664Q8N3J9 261 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 C12orf45Q8N5I9 185 aaPredicted RBP2.08□□□□□ -2.08
ATXN3-217ENST00000553287 MIR7-3HGQ8N6C7 128 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 LINC00469Q8N7U9 141 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 MITD1Q8WV92 249 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 CAMK2N2Q96S95 79 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 PFDN5Q99471 154 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 ATP5SQ99766 215 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 UQCC1Q9NVA1 299 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 SCP2D1Q9UJQ7 156 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 USH2AO75445 5202 aa2.08□□□□□ -2.08
ATXN3-217ENST00000553287 TRBV7-3A0A075B6L6 115 aa2.07□□□□□ -2.08
ATXN3-217ENST00000553287 A0A1W2PPV4 95 aa2.07□□□□□ -2.08
ATXN3-217ENST00000553287 C9orf170A2RU37 121 aa2.07□□□□□ -2.08
ATXN3-217ENST00000553287 RBAKDNA6NC62 111 aa2.07□□□□□ -2.08
ATXN3-217ENST00000553287 A8MWV9 139 aa2.07□□□□□ -2.08
ATXN3-217ENST00000553287 FNDC10F2Z333 226 aa2.07□□□□□ -2.08
ATXN3-217ENST00000553287 M0R381 172 aa2.07□□□□□ -2.08
ATXN3-217ENST00000553287 SEC11BP0C7V7 166 aa2.07□□□□□ -2.08
ATXN3-217ENST00000553287 STAG3L2P0CL84 134 aa2.07□□□□□ -2.08
ATXN3-217ENST00000553287 S100A4P26447 101 aaKnown RBP2.07□□□□□ -2.08
ATXN3-217ENST00000553287 UBE2L3P68036 154 aaKnown RBP2.07□□□□□ -2.08
ATXN3-217ENST00000553287 COTL1Q14019 142 aa2.07□□□□□ -2.08
ATXN3-217ENST00000553287 PRNTQ86SH4 94 aa2.07□□□□□ -2.08
ATXN3-217ENST00000553287 C15orf40Q8WUR7 153 aa2.07□□□□□ -2.08
ATXN3-217ENST00000553287 SLIRPQ9GZT3 109 aaKnown RBP2.07□□□□□ -2.08
ATXN3-217ENST00000553287 CARHSP1Q9Y2V2 147 aaKnown RBP2.07□□□□□ -2.08
ATXN3-217ENST00000553287 APCSP02743 223 aa2.06□□□□□ -2.08
ATXN3-217ENST00000553287 IGLV7-43P04211 117 aa2.06□□□□□ -2.08
ATXN3-217ENST00000553287 ARMS2P0C7Q2 107 aa2.06□□□□□ -2.08
ATXN3-217ENST00000553287 BCL2P10415 239 aa2.06□□□□□ -2.08
ATXN3-217ENST00000553287 UBE2D1P51668 147 aa2.06□□□□□ -2.08
ATXN3-217ENST00000553287 S100A10P60903 97 aa2.06□□□□□ -2.08
ATXN3-217ENST00000553287 SSBP1Q04837 148 aaKnown RBP2.06□□□□□ -2.08
ATXN3-217ENST00000553287 SPCS2Q15005 226 aa2.06□□□□□ -2.08
ATXN3-217ENST00000553287 ZNF56Q15929 161 aa2.06□□□□□ -2.08
ATXN3-217ENST00000553287 SMUG1Q53HV7 270 aa2.06□□□□□ -2.08
ATXN3-217ENST00000553287 CMTM2Q8TAZ6 248 aa2.06□□□□□ -2.08
ATXN3-217ENST00000553287 DYNC2LI1Q8TCX1 351 aa2.06□□□□□ -2.08
ATXN3-217ENST00000553287 SCGB3A2Q96PL1 93 aa2.06□□□□□ -2.08
ATXN3-217ENST00000553287 CHCHD7Q9BUK0 85 aa2.06□□□□□ -2.08
ATXN3-217ENST00000553287 DERL1Q9BUN8 251 aa2.06□□□□□ -2.08
ATXN3-217ENST00000553287 GGACTQ9BVM4 153 aa2.06□□□□□ -2.08
ATXN3-217ENST00000553287 ZNF471Q9BX82 626 aaPredicted RBP2.06□□□□□ -2.08
ATXN3-217ENST00000553287 NPCDR1Q9BY65 106 aa2.06□□□□□ -2.08
ATXN3-217ENST00000553287 VCX3BQ9H321 246 aa2.06□□□□□ -2.08
ATXN3-217ENST00000553287 C11orf1Q9H5F2 150 aa2.06□□□□□ -2.08
ATXN3-217ENST00000553287 LENEPQ9Y5L5 61 aa2.06□□□□□ -2.08
ATXN3-217ENST00000553287 MACF1Q9UPN3 7388 aaKnown RBP2.05□□□□□ -2.08
ATXN3-217ENST00000553287 B4DEV8 164 aa2.05□□□□□ -2.08
ATXN3-217ENST00000553287 MBP02144 154 aa2.05□□□□□ -2.08
ATXN3-217ENST00000553287 CRIP1P50238 77 aa2.05□□□□□ -2.08
ATXN3-217ENST00000553287 DEFA1P59665 94 aa2.05□□□□□ -2.08
ATXN3-217ENST00000553287 CTAG1AP78358 180 aa2.05□□□□□ -2.08
ATXN3-217ENST00000553287 C9orf116Q5BN46 136 aaPredicted RBP2.05□□□□□ -2.08
ATXN3-217ENST00000553287 DIRC1Q969H9 104 aa2.05□□□□□ -2.08
ATXN3-217ENST00000553287 PTH2Q96A98 100 aa2.05□□□□□ -2.08
ATXN3-217ENST00000553287 SFRP2Q96HF1 295 aa2.05□□□□□ -2.08
ATXN3-217ENST00000553287 SH3BGRL3Q9H299 93 aa2.05□□□□□ -2.08
ATXN3-217ENST00000553287 PHLDA3Q9Y5J5 127 aa2.05□□□□□ -2.08
ATXN3-217ENST00000553287 TRAV6A0A075B6T7 132 aa2.04□□□□□ -2.08
ATXN3-217ENST00000553287 TRBV6-1A0A0K0K1D8 114 aa2.04□□□□□ -2.08
ATXN3-217ENST00000553287 KRBOX1C9JBD0 128 aa2.04□□□□□ -2.08
ATXN3-217ENST00000553287 SULT1A1P50225 295 aa2.04□□□□□ -2.08
ATXN3-217ENST00000553287 SULT1A2P50226 295 aa2.04□□□□□ -2.08
ATXN3-217ENST00000553287 TAS2R30P59541 319 aa2.04□□□□□ -2.08
ATXN3-217ENST00000553287 RAB2AP61019 212 aa2.04□□□□□ -2.08
ATXN3-217ENST00000553287 EIF5AP63241 154 aaKnown RBP2.04□□□□□ -2.08
ATXN3-217ENST00000553287 MRPS10P82664 201 aaKnown RBP2.04□□□□□ -2.08
ATXN3-217ENST00000553287 PYDC2Q56P42 97 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms