RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 NDUFS6O75380 124 aaKnown RBP4.22□□□□□ -1.73
PRPF40B-214ENST00000551320 IFNA1P01562 189 aa4.22□□□□□ -1.73
PRPF40B-214ENST00000551320 P01737 135 aa4.22□□□□□ -1.73
PRPF40B-214ENST00000551320 CXCL1P09341 107 aa4.22□□□□□ -1.73
PRPF40B-214ENST00000551320 COTL1Q14019 142 aa4.22□□□□□ -1.73
PRPF40B-214ENST00000551320 TMEM97Q5BJF2 176 aa4.22□□□□□ -1.73
PRPF40B-214ENST00000551320 AMMECR1LQ6DCA0 310 aa4.22□□□□□ -1.73
PRPF40B-214ENST00000551320 WDR73Q6P4I2 378 aa4.22□□□□□ -1.73
PRPF40B-214ENST00000551320 BCL2L11O43521 198 aa4.21□□□□□ -1.74
PRPF40B-214ENST00000551320 S100A9P06702 114 aaKnown RBP4.21□□□□□ -1.74
PRPF40B-214ENST00000551320 BCL2P10415 239 aa4.21□□□□□ -1.74
PRPF40B-214ENST00000551320 FGF6P10767 208 aa4.21□□□□□ -1.74
PRPF40B-214ENST00000551320 GNG4P50150 75 aa4.21□□□□□ -1.74
PRPF40B-214ENST00000551320 PKIAP61925 76 aa4.21□□□□□ -1.74
PRPF40B-214ENST00000551320 GAGE2BQ13066 116 aa4.21□□□□□ -1.74
PRPF40B-214ENST00000551320 KRTAP11-1Q8IUC1 163 aa4.21□□□□□ -1.74
PRPF40B-214ENST00000551320 RNF185Q96GF1 192 aa4.21□□□□□ -1.74
PRPF40B-214ENST00000551320 PGLYRP4Q96LB8 373 aa4.21□□□□□ -1.74
PRPF40B-214ENST00000551320 OPRPNQ99935 248 aaPredicted RBP4.21□□□□□ -1.74
PRPF40B-214ENST00000551320 MED9Q9NWA0 146 aa4.21□□□□□ -1.74
PRPF40B-214ENST00000551320 SMKR1H3BMG3 65 aa4.2□□□□□ -1.74
PRPF40B-214ENST00000551320 CACNG7P62955 275 aa4.2□□□□□ -1.74
PRPF40B-214ENST00000551320 SRSF9Q13242 221 aaKnown RBP eCLIP4.2□□□□□ -1.74
PRPF40B-214ENST00000551320 PHF5AQ7RTV0 110 aaKnown RBP4.2□□□□□ -1.74
PRPF40B-214ENST00000551320 OCC1Q8TAD7 63 aa4.2□□□□□ -1.74
PRPF40B-214ENST00000551320 C11orf52Q96A22 123 aa4.2□□□□□ -1.74
PRPF40B-214ENST00000551320 TCEAL7Q9BRU2 100 aa4.2□□□□□ -1.74
PRPF40B-214ENST00000551320 TMEM242Q9NWH2 141 aa4.2□□□□□ -1.74
PRPF40B-214ENST00000551320 GVQW2A0A096LPI5 108 aaPredicted RBP4.19□□□□□ -1.74
PRPF40B-214ENST00000551320 LINC00959A0A1B0GUT2 108 aa4.19□□□□□ -1.74
PRPF40B-214ENST00000551320 KANTRA0A1W2PQU2 76 aa4.19□□□□□ -1.74
PRPF40B-214ENST00000551320 FAM168BA1KXE4 195 aa4.19□□□□□ -1.74
PRPF40B-214ENST00000551320 SDHAF1A6NFY7 115 aa4.19□□□□□ -1.74
PRPF40B-214ENST00000551320 NCR2O95944 276 aa4.19□□□□□ -1.74
PRPF40B-214ENST00000551320 TSHBP01222 138 aa4.19□□□□□ -1.74
PRPF40B-214ENST00000551320 APCSP02743 223 aa4.19□□□□□ -1.74
PRPF40B-214ENST00000551320 CTRLP40313 264 aa4.19□□□□□ -1.74
PRPF40B-214ENST00000551320 CEBPGP53567 150 aa4.19□□□□□ -1.74
PRPF40B-214ENST00000551320 C10orf25Q5T742 122 aa4.19□□□□□ -1.74
PRPF40B-214ENST00000551320 C9orf62Q8N4C0 152 aa4.19□□□□□ -1.74
PRPF40B-214ENST00000551320 PRR26Q8N8Z3 221 aa4.19□□□□□ -1.74
PRPF40B-214ENST00000551320 CARD19Q96LW7 228 aa4.19□□□□□ -1.74
PRPF40B-214ENST00000551320 IGLV4-69A0A075B6H9 119 aa4.18□□□□□ -1.74
PRPF40B-214ENST00000551320 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
PRPF40B-214ENST00000551320 UMAD1C9J7I0 102 aa4.18□□□□□ -1.74
PRPF40B-214ENST00000551320 TRGC1P0CF51 173 aa4.18□□□□□ -1.74
PRPF40B-214ENST00000551320 PMCHP20382 165 aa4.18□□□□□ -1.74
PRPF40B-214ENST00000551320 RPS20P60866 119 aaKnown RBP4.18□□□□□ -1.74
PRPF40B-214ENST00000551320 CFAP161Q6P656 301 aa4.18□□□□□ -1.74
PRPF40B-214ENST00000551320 C5orf38Q86SI9 138 aa4.18□□□□□ -1.74
PRPF40B-214ENST00000551320 OR5A1Q8NGJ0 315 aa4.18□□□□□ -1.74
PRPF40B-214ENST00000551320 RPP21Q9H633 154 aaKnown RBP4.18□□□□□ -1.74
PRPF40B-214ENST00000551320 MANBALQ9NQG1 85 aa4.18□□□□□ -1.74
PRPF40B-214ENST00000551320 PSORS1C2Q9UIG4 136 aa4.18□□□□□ -1.74
PRPF40B-214ENST00000551320 F2Z2F3 143 aa4.17□□□□□ -1.74
PRPF40B-214ENST00000551320 MEF2BQ02080 365 aaPredicted RBP4.17□□□□□ -1.74
PRPF40B-214ENST00000551320 SYCNQ0VAF6 134 aa4.17□□□□□ -1.74
PRPF40B-214ENST00000551320 ZNF345Q14585 488 aa4.17□□□□□ -1.74
PRPF40B-214ENST00000551320 RGS21Q2M5E4 152 aa4.17□□□□□ -1.74
PRPF40B-214ENST00000551320 C9orf116Q5BN46 136 aaPredicted RBP4.17□□□□□ -1.74
PRPF40B-214ENST00000551320 SPINK6Q6UWN8 80 aa4.17□□□□□ -1.74
PRPF40B-214ENST00000551320 TRAV13-1A0A0B4J241 112 aa4.16□□□□□ -1.74
PRPF40B-214ENST00000551320 RPL18AQ02543 176 aaKnown RBP4.16□□□□□ -1.74
PRPF40B-214ENST00000551320 C1orf137Q5JT78 98 aa4.16□□□□□ -1.74
PRPF40B-214ENST00000551320 REG3GQ6UW15 175 aa4.16□□□□□ -1.74
PRPF40B-214ENST00000551320 Q6ZRP5 223 aa4.16□□□□□ -1.74
PRPF40B-214ENST00000551320 TRAV1-1A0A0B4J248 108 aa4.15□□□□□ -1.75
PRPF40B-214ENST00000551320 IGHV1-58A0A0C4DH39 117 aa4.15□□□□□ -1.75
PRPF40B-214ENST00000551320 XKRY2A2RUG3 117 aa4.15□□□□□ -1.75
PRPF40B-214ENST00000551320 HMSDA8MTL9 139 aa4.15□□□□□ -1.75
PRPF40B-214ENST00000551320 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.15□□□□□ -1.75
PRPF40B-214ENST00000551320 I3L3M4 83 aa4.15□□□□□ -1.75
PRPF40B-214ENST00000551320 MT-ND6P03923 174 aa4.15□□□□□ -1.75
PRPF40B-214ENST00000551320 ESDP10768 282 aa4.15□□□□□ -1.75
PRPF40B-214ENST00000551320 CAMPP49913 170 aa4.15□□□□□ -1.75
PRPF40B-214ENST00000551320 Q6ZUT4 128 aa4.15□□□□□ -1.75
PRPF40B-214ENST00000551320 AMN1Q8IY45 258 aa4.15□□□□□ -1.75
PRPF40B-214ENST00000551320 ZNF664Q8N3J9 261 aa4.15□□□□□ -1.75
PRPF40B-214ENST00000551320 NUP35Q8NFH5 326 aa4.15□□□□□ -1.75
PRPF40B-214ENST00000551320 TMEM101Q96IK0 257 aa4.15□□□□□ -1.75
PRPF40B-214ENST00000551320 CDC42SE2Q9NRR3 84 aa4.15□□□□□ -1.75
PRPF40B-214ENST00000551320 LOC107984640A0A0U1RRK4 108 aa4.14□□□□□ -1.75
PRPF40B-214ENST00000551320 TEX46H3BTG2 121 aa4.14□□□□□ -1.75
PRPF40B-214ENST00000551320 GATCO43716 136 aaKnown RBP4.14□□□□□ -1.75
PRPF40B-214ENST00000551320 PDE6DO43924 150 aa4.14□□□□□ -1.75
PRPF40B-214ENST00000551320 RPL39P62891 51 aaKnown RBP4.14□□□□□ -1.75
PRPF40B-214ENST00000551320 SS18Q15532 418 aa4.14□□□□□ -1.75
PRPF40B-214ENST00000551320 FAM19A5Q7Z5A7 132 aaPredicted RBP4.14□□□□□ -1.75
PRPF40B-214ENST00000551320 KRTAP7-1Q8IUC3 87 aa4.14□□□□□ -1.75
PRPF40B-214ENST00000551320 BTF3L4Q96K17 158 aa4.14□□□□□ -1.75
PRPF40B-214ENST00000551320 CAMK2N2Q96S95 79 aa4.14□□□□□ -1.75
PRPF40B-214ENST00000551320 CNFNQ9BYD5 112 aa4.14□□□□□ -1.75
PRPF40B-214ENST00000551320 ST20Q9HBF5 79 aa4.14□□□□□ -1.75
PRPF40B-214ENST00000551320 RAB4AP20338 218 aa4.13□□□□□ -1.75
PRPF40B-214ENST00000551320 POLR2KP53803 58 aaKnown RBP4.13□□□□□ -1.75
PRPF40B-214ENST00000551320 CD164L2Q6UWJ8 174 aa4.13□□□□□ -1.75
PRPF40B-214ENST00000551320 UNQ6190/PRO20217Q6UXQ8 127 aa4.13□□□□□ -1.75
PRPF40B-214ENST00000551320 FAM104AQ969W3 186 aa4.13□□□□□ -1.75
PRPF40B-214ENST00000551320 MRAP2Q96G30 205 aa4.13□□□□□ -1.75
PRPF40B-214ENST00000551320 A0A087WZ39 114 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms