RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 MRAP2Q96G30 205 aa8.31□□□□□ -1.08
NPAS3-209ENST00000551008 ST20Q9HBF5 79 aa8.31□□□□□ -1.08
NPAS3-209ENST00000551008 NAT8Q9UHE5 227 aa8.31□□□□□ -1.08
NPAS3-209ENST00000551008 AMMECR1LQ6DCA0 310 aa8.3□□□□□ -1.08
NPAS3-209ENST00000551008 BORCS7Q96B45 105 aa8.3□□□□□ -1.08
NPAS3-209ENST00000551008 KRTAP29-1A8MX34 341 aaPredicted RBP8.29□□□□□ -1.08
NPAS3-209ENST00000551008 ZNF25P17030 456 aaPredicted RBP8.29□□□□□ -1.08
NPAS3-209ENST00000551008 RIGQ13278 110 aa8.29□□□□□ -1.08
NPAS3-209ENST00000551008 MRPL51Q4U2R6 128 aaKnown RBP8.29□□□□□ -1.08
NPAS3-209ENST00000551008 HIGD2BQ4VC39 106 aa8.29□□□□□ -1.08
NPAS3-209ENST00000551008 MRPL52Q86TS9 123 aaKnown RBP8.29□□□□□ -1.08
NPAS3-209ENST00000551008 OR5A1Q8NGJ0 315 aa8.29□□□□□ -1.08
NPAS3-209ENST00000551008 GVQW2A0A096LPI5 108 aaPredicted RBP8.28□□□□□ -1.08
NPAS3-209ENST00000551008 LINC00959A0A1B0GUT2 108 aa8.28□□□□□ -1.08
NPAS3-209ENST00000551008 FAM104BQ5XKR9 115 aa8.28□□□□□ -1.08
NPAS3-209ENST00000551008 CDC42SE2Q9NRR3 84 aa8.28□□□□□ -1.08
NPAS3-209ENST00000551008 NAT8BQ9UHF3 227 aa8.28□□□□□ -1.08
NPAS3-209ENST00000551008 A0A1B0GXF2 115 aa8.27□□□□□ -1.09
NPAS3-209ENST00000551008 PEA15Q15121 130 aa8.27□□□□□ -1.09
NPAS3-209ENST00000551008 SPACA4Q8TDM5 124 aa8.27□□□□□ -1.09
NPAS3-209ENST00000551008 IGHV3-64A0A075B6Q5 118 aa8.26□□□□□ -1.09
NPAS3-209ENST00000551008 C7orf77A4D0Y5 90 aa8.26□□□□□ -1.09
NPAS3-209ENST00000551008 CCL25O15444 150 aa8.26□□□□□ -1.09
NPAS3-209ENST00000551008 RPL37AP61513 92 aaKnown RBP8.26□□□□□ -1.09
NPAS3-209ENST00000551008 SUMO2P61956 95 aaKnown RBP8.26□□□□□ -1.09
NPAS3-209ENST00000551008 FAM104AQ969W3 186 aa8.26□□□□□ -1.09
NPAS3-209ENST00000551008 SMDT1Q9H4I9 107 aa8.26□□□□□ -1.09
NPAS3-209ENST00000551008 A0A087WYN8 130 aa8.25□□□□□ -1.09
NPAS3-209ENST00000551008 XCL1P47992 114 aa8.25□□□□□ -1.09
NPAS3-209ENST00000551008 CAMPP49913 170 aa8.25□□□□□ -1.09
NPAS3-209ENST00000551008 PRSS3P2Q8NHM4 247 aa8.25□□□□□ -1.09
NPAS3-209ENST00000551008 LINC00526Q96FQ7 95 aa8.25□□□□□ -1.09
NPAS3-209ENST00000551008 AP5S1Q9NUS5 200 aa8.25□□□□□ -1.09
NPAS3-209ENST00000551008 UBE2D4Q9Y2X8 147 aa8.25□□□□□ -1.09
NPAS3-209ENST00000551008 TRBV24-1A0A075B6N3 115 aa8.24□□□□□ -1.09
NPAS3-209ENST00000551008 VCYO14598 125 aa8.24□□□□□ -1.09
NPAS3-209ENST00000551008 RNASE13Q5GAN3 156 aaKnown RBP8.24□□□□□ -1.09
NPAS3-209ENST00000551008 MRPL54Q6P161 138 aaKnown RBP8.24□□□□□ -1.09
NPAS3-209ENST00000551008 ZNF664Q8N3J9 261 aa8.24□□□□□ -1.09
NPAS3-209ENST00000551008 PLAC8Q9NZF1 115 aa8.24□□□□□ -1.09
NPAS3-209ENST00000551008 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.23□□□□□ -1.09
NPAS3-209ENST00000551008 RPL32P62910 135 aaKnown RBP8.23□□□□□ -1.09
NPAS3-209ENST00000551008 COX6A2Q02221 97 aa8.23□□□□□ -1.09
NPAS3-209ENST00000551008 CFAP161Q6P656 301 aa8.23□□□□□ -1.09
NPAS3-209ENST00000551008 Q6ZUT4 128 aa8.23□□□□□ -1.09
NPAS3-209ENST00000551008 TMEM101Q96IK0 257 aa8.23□□□□□ -1.09
NPAS3-209ENST00000551008 BTF3L4Q96K17 158 aa8.23□□□□□ -1.09
NPAS3-209ENST00000551008 NPYP01303 97 aa8.22□□□□□ -1.09
NPAS3-209ENST00000551008 CSDC2Q9Y534 153 aaKnown RBP8.22□□□□□ -1.09
NPAS3-209ENST00000551008 A0A096LNI7 61 aa8.21□□□□□ -1.1
NPAS3-209ENST00000551008 A0A1B0GW15 77 aa8.21□□□□□ -1.1
NPAS3-209ENST00000551008 LINC00862A6NCI5 91 aa8.21□□□□□ -1.1
NPAS3-209ENST00000551008 D6R8Y8 96 aa8.21□□□□□ -1.1
NPAS3-209ENST00000551008 TNFRSF6BO95407 300 aa8.21□□□□□ -1.1
NPAS3-209ENST00000551008 FCER1GP30273 86 aa8.21□□□□□ -1.1
NPAS3-209ENST00000551008 RPL39P62891 51 aaKnown RBP8.21□□□□□ -1.1
NPAS3-209ENST00000551008 HBBP68871 147 aa8.21□□□□□ -1.1
NPAS3-209ENST00000551008 CD164L2Q6UWJ8 174 aa8.21□□□□□ -1.1
NPAS3-209ENST00000551008 C20orf78Q9BR46 151 aa8.21□□□□□ -1.1
NPAS3-209ENST00000551008 IGHV1-58A0A0C4DH39 117 aa8.2□□□□□ -1.1
NPAS3-209ENST00000551008 PPP1R2P9O14990 202 aa8.2□□□□□ -1.1
NPAS3-209ENST00000551008 PPP1R17O96001 155 aa8.2□□□□□ -1.1
NPAS3-209ENST00000551008 CKS2P33552 79 aa8.2□□□□□ -1.1
NPAS3-209ENST00000551008 TIMM21Q9BVV7 248 aa8.2□□□□□ -1.1
NPAS3-209ENST00000551008 SMIM2Q9BVW6 85 aa8.2□□□□□ -1.1
NPAS3-209ENST00000551008 OXTP01178 125 aa8.19□□□□□ -1.1
NPAS3-209ENST00000551008 SS18Q15532 418 aa8.19□□□□□ -1.1
NPAS3-209ENST00000551008 KIR2DL4Q99706 377 aa8.19□□□□□ -1.1
NPAS3-209ENST00000551008 IGKV2-24A0A0C4DH68 120 aa8.18□□□□□ -1.1
NPAS3-209ENST00000551008 MT1HL1P0DM35 61 aa8.18□□□□□ -1.1
NPAS3-209ENST00000551008 OPRPNQ99935 248 aaPredicted RBP8.18□□□□□ -1.1
NPAS3-209ENST00000551008 TRAV13-1A0A0B4J241 112 aa8.17□□□□□ -1.1
NPAS3-209ENST00000551008 PHOX2AO14813 284 aa8.17□□□□□ -1.1
NPAS3-209ENST00000551008 TCAPO15273 167 aa8.17□□□□□ -1.1
NPAS3-209ENST00000551008 MAJINQ3KP22 176 aa8.17□□□□□ -1.1
NPAS3-209ENST00000551008 ATP5L2Q7Z4Y8 100 aa8.17□□□□□ -1.1
NPAS3-209ENST00000551008 CARD19Q96LW7 228 aa8.17□□□□□ -1.1
NPAS3-209ENST00000551008 TNXBP22105 4242 aa8.17□□□□□ -1.1
NPAS3-209ENST00000551008 IGLV4-69A0A075B6H9 119 aa8.16□□□□□ -1.1
NPAS3-209ENST00000551008 C1orf196B1AJZ1 125 aa8.16□□□□□ -1.1
NPAS3-209ENST00000551008 Q6ZRU5 148 aa8.16□□□□□ -1.1
NPAS3-209ENST00000551008 HMCN2Q8NDA2 5059 aa8.15□□□□□ -1.1
NPAS3-209ENST00000551008 F8W036 122 aa8.15□□□□□ -1.1
NPAS3-209ENST00000551008 COX7A2LO14548 114 aa8.15□□□□□ -1.1
NPAS3-209ENST00000551008 S100A8P05109 93 aa8.15□□□□□ -1.1
NPAS3-209ENST00000551008 SYCNQ0VAF6 134 aa8.15□□□□□ -1.1
NPAS3-209ENST00000551008 C5orf38Q86SI9 138 aa8.15□□□□□ -1.1
NPAS3-209ENST00000551008 STPG4Q8N801 248 aa8.15□□□□□ -1.1
NPAS3-209ENST00000551008 MRPL18Q9H0U6 180 aaKnown RBP8.15□□□□□ -1.1
NPAS3-209ENST00000551008 PPBPP02775 128 aa8.14□□□□□ -1.11
NPAS3-209ENST00000551008 ADCYAP1P18509 176 aa8.14□□□□□ -1.11
NPAS3-209ENST00000551008 MRPS36P82909 103 aaKnown RBP8.14□□□□□ -1.11
NPAS3-209ENST00000551008 IFITM2Q01629 132 aa8.14□□□□□ -1.11
NPAS3-209ENST00000551008 ORMDL3Q8N138 153 aa8.14□□□□□ -1.11
NPAS3-209ENST00000551008 IGHV3OR16-9A0A0B4J2B5 98 aa8.13□□□□□ -1.11
NPAS3-209ENST00000551008 PRSS47A8MTI9 375 aa8.13□□□□□ -1.11
NPAS3-209ENST00000551008 PNRC1Q12796 327 aaPredicted RBP8.13□□□□□ -1.11
NPAS3-209ENST00000551008 CLLU1Q5K131 121 aa8.13□□□□□ -1.11
NPAS3-209ENST00000551008 TMEM136Q6ZRR5 245 aa8.13□□□□□ -1.11
NPAS3-209ENST00000551008 DPH3Q96FX2 82 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms