RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 FCER1GP30273 86 aa6.28□□□□□ -1.4
HDAC7-229ENST00000549883 XCL1P47992 114 aa6.28□□□□□ -1.4
HDAC7-229ENST00000549883 FOXI1Q12951 378 aa6.28□□□□□ -1.4
HDAC7-229ENST00000549883 DGAT2L7PQ6IED9 249 aa6.28□□□□□ -1.4
HDAC7-229ENST00000549883 SDIM1Q6ZPB5 146 aa6.28□□□□□ -1.4
HDAC7-229ENST00000549883 MRPL52Q86TS9 123 aaKnown RBP6.28□□□□□ -1.4
HDAC7-229ENST00000549883 OR5A1Q8NGJ0 315 aa6.28□□□□□ -1.4
HDAC7-229ENST00000549883 FAM104AQ969W3 186 aa6.28□□□□□ -1.4
HDAC7-229ENST00000549883 CDC42SE2Q9NRR3 84 aa6.28□□□□□ -1.4
HDAC7-229ENST00000549883 TRBV24-1A0A075B6N3 115 aa6.27□□□□□ -1.41
HDAC7-229ENST00000549883 A0A1B0GW15 77 aa6.27□□□□□ -1.41
HDAC7-229ENST00000549883 FAM229AH3BQW9 127 aa6.27□□□□□ -1.41
HDAC7-229ENST00000549883 CCL25O15444 150 aa6.27□□□□□ -1.41
HDAC7-229ENST00000549883 CHTF8P0CG12 524 aa6.27□□□□□ -1.41
HDAC7-229ENST00000549883 KRTAP10-4P60372 401 aaPredicted RBP6.27□□□□□ -1.41
HDAC7-229ENST00000549883 CNBPP62633 177 aaKnown RBP6.27□□□□□ -1.41
HDAC7-229ENST00000549883 RPL39P62891 51 aaKnown RBP6.27□□□□□ -1.41
HDAC7-229ENST00000549883 CLRN3Q8NCR9 226 aa6.27□□□□□ -1.41
HDAC7-229ENST00000549883 LINC00526Q96FQ7 95 aa6.27□□□□□ -1.41
HDAC7-229ENST00000549883 TMEM101Q96IK0 257 aa6.27□□□□□ -1.41
HDAC7-229ENST00000549883 BTF3L4Q96K17 158 aa6.27□□□□□ -1.41
HDAC7-229ENST00000549883 OPRPNQ99935 248 aaPredicted RBP6.27□□□□□ -1.41
HDAC7-229ENST00000549883 UBE2D4Q9Y2X8 147 aa6.27□□□□□ -1.41
HDAC7-229ENST00000549883 LINC00862A6NCI5 91 aa6.26□□□□□ -1.41
HDAC7-229ENST00000549883 TCAPO15273 167 aa6.26□□□□□ -1.41
HDAC7-229ENST00000549883 Q6ZUT4 128 aa6.26□□□□□ -1.41
HDAC7-229ENST00000549883 ZNF664Q8N3J9 261 aa6.26□□□□□ -1.41
HDAC7-229ENST00000549883 C20orf78Q9BR46 151 aa6.26□□□□□ -1.41
HDAC7-229ENST00000549883 SMIM2Q9BVW6 85 aa6.26□□□□□ -1.41
HDAC7-229ENST00000549883 SRRM2Q9UQ35 2752 aaKnown RBP6.25□□□□□ -1.41
HDAC7-229ENST00000549883 F8W036 122 aa6.25□□□□□ -1.41
HDAC7-229ENST00000549883 PPP1R2P9O14990 202 aa6.25□□□□□ -1.41
HDAC7-229ENST00000549883 PPP1R17O96001 155 aa6.25□□□□□ -1.41
HDAC7-229ENST00000549883 MT-ND4LP03901 98 aa6.25□□□□□ -1.41
HDAC7-229ENST00000549883 PNRC1Q12796 327 aaPredicted RBP6.25□□□□□ -1.41
HDAC7-229ENST00000549883 ATP5L2Q7Z4Y8 100 aa6.25□□□□□ -1.41
HDAC7-229ENST00000549883 KIR2DL4Q99706 377 aa6.25□□□□□ -1.41
HDAC7-229ENST00000549883 GVQW2A0A096LPI5 108 aaPredicted RBP6.24□□□□□ -1.41
HDAC7-229ENST00000549883 TMEM218A2RU14 115 aa6.24□□□□□ -1.41
HDAC7-229ENST00000549883 S100A8P05109 93 aa6.24□□□□□ -1.41
HDAC7-229ENST00000549883 RPL32P62910 135 aaKnown RBP6.24□□□□□ -1.41
HDAC7-229ENST00000549883 TMEM136Q6ZRR5 245 aa6.24□□□□□ -1.41
HDAC7-229ENST00000549883 ANAPC16Q96DE5 110 aa6.24□□□□□ -1.41
HDAC7-229ENST00000549883 PRELID3AQ96N28 172 aa6.24□□□□□ -1.41
HDAC7-229ENST00000549883 AP5S1Q9NUS5 200 aa6.24□□□□□ -1.41
HDAC7-229ENST00000549883 TRAV13-1A0A0B4J241 112 aa6.23□□□□□ -1.41
HDAC7-229ENST00000549883 LOC389332A0A1B0GUA5 103 aa6.23□□□□□ -1.41
HDAC7-229ENST00000549883 SS18Q15532 418 aa6.23□□□□□ -1.41
HDAC7-229ENST00000549883 COMMD7Q86VX2 200 aa6.23□□□□□ -1.41
HDAC7-229ENST00000549883 ORMDL3Q8N138 153 aa6.23□□□□□ -1.41
HDAC7-229ENST00000549883 PRSS3P2Q8NHM4 247 aa6.23□□□□□ -1.41
HDAC7-229ENST00000549883 CSDC2Q9Y534 153 aaKnown RBP6.23□□□□□ -1.41
HDAC7-229ENST00000549883 IGHV3-64A0A075B6Q5 118 aa6.22□□□□□ -1.41
HDAC7-229ENST00000549883 PPBPP02775 128 aa6.22□□□□□ -1.41
HDAC7-229ENST00000549883 PLA2G1BP04054 148 aaKnown RBP6.22□□□□□ -1.41
HDAC7-229ENST00000549883 HNRNPA3P51991 378 aaKnown RBP6.22□□□□□ -1.41
HDAC7-229ENST00000549883 COX6A2Q02221 97 aa6.22□□□□□ -1.41
HDAC7-229ENST00000549883 CIRBPQ14011 172 aaKnown RBP6.22□□□□□ -1.41
HDAC7-229ENST00000549883 CFAP161Q6P656 301 aa6.22□□□□□ -1.41
HDAC7-229ENST00000549883 UQCC3Q6UW78 93 aa6.22□□□□□ -1.41
HDAC7-229ENST00000549883 CD164L2Q6UWJ8 174 aa6.22□□□□□ -1.41
HDAC7-229ENST00000549883 TIMM21Q9BVV7 248 aa6.22□□□□□ -1.41
HDAC7-229ENST00000549883 VPS13BQ7Z7G8 4022 aa6.22□□□□□ -1.41
HDAC7-229ENST00000549883 A0A087WYN8 130 aa6.21□□□□□ -1.42
HDAC7-229ENST00000549883 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.21□□□□□ -1.42
HDAC7-229ENST00000549883 PHOX2AO14813 284 aa6.21□□□□□ -1.42
HDAC7-229ENST00000549883 KIAA1644Q3SXP7 199 aa6.21□□□□□ -1.42
HDAC7-229ENST00000549883 ZC2HC1BQ5TFG8 222 aa6.21□□□□□ -1.42
HDAC7-229ENST00000549883 C5orf38Q86SI9 138 aa6.21□□□□□ -1.42
HDAC7-229ENST00000549883 A0A096LNI7 61 aa6.2□□□□□ -1.42
HDAC7-229ENST00000549883 IGHV1-58A0A0C4DH39 117 aa6.2□□□□□ -1.42
HDAC7-229ENST00000549883 PRSS47A8MTI9 375 aa6.2□□□□□ -1.42
HDAC7-229ENST00000549883 C1orf196B1AJZ1 125 aa6.2□□□□□ -1.42
HDAC7-229ENST00000549883 SPACA4Q8TDM5 124 aa6.2□□□□□ -1.42
HDAC7-229ENST00000549883 IGLV4-69A0A075B6H9 119 aa6.19□□□□□ -1.42
HDAC7-229ENST00000549883 IGKV2-24A0A0C4DH68 120 aa6.19□□□□□ -1.42
HDAC7-229ENST00000549883 COX7A2LO14548 114 aa6.19□□□□□ -1.42
HDAC7-229ENST00000549883 TMEM18Q96B42 140 aa6.19□□□□□ -1.42
HDAC7-229ENST00000549883 DPH3Q96FX2 82 aa6.19□□□□□ -1.42
HDAC7-229ENST00000549883 IMMP2LQ96T52 175 aa6.19□□□□□ -1.42
HDAC7-229ENST00000549883 SEC11CQ9BY50 192 aa6.19□□□□□ -1.42
HDAC7-229ENST00000549883 SPANXA1Q9NS26 97 aa6.19□□□□□ -1.42
HDAC7-229ENST00000549883 MYCBP2O75592 4640 aa6.19□□□□□ -1.42
HDAC7-229ENST00000549883 IGLV4-3A0A075B6K6 122 aa6.18□□□□□ -1.42
HDAC7-229ENST00000549883 RAB5AP20339 215 aa6.18□□□□□ -1.42
HDAC7-229ENST00000549883 MALP21145 153 aa6.18□□□□□ -1.42
HDAC7-229ENST00000549883 RPL37AP61513 92 aaKnown RBP6.18□□□□□ -1.42
HDAC7-229ENST00000549883 MRPS36P82909 103 aaKnown RBP6.18□□□□□ -1.42
HDAC7-229ENST00000549883 MAJINQ3KP22 176 aa6.18□□□□□ -1.42
HDAC7-229ENST00000549883 C10orf91Q5T1B1 145 aa6.18□□□□□ -1.42
HDAC7-229ENST00000549883 Q6ZRU5 148 aa6.18□□□□□ -1.42
HDAC7-229ENST00000549883 Q8N8P6 123 aa6.18□□□□□ -1.42
HDAC7-229ENST00000549883 CTDSP1Q9GZU7 261 aa6.18□□□□□ -1.42
HDAC7-229ENST00000549883 MAP1LC3AQ9H492 121 aa6.18□□□□□ -1.42
HDAC7-229ENST00000549883 DMBT1Q9UGM3 2413 aaPredicted RBP6.17□□□□□ -1.42
HDAC7-229ENST00000549883 IGHV3OR16-9A0A0B4J2B5 98 aa6.17□□□□□ -1.42
HDAC7-229ENST00000549883 IFITM10A6NMD0 228 aa6.17□□□□□ -1.42
HDAC7-229ENST00000549883 IFI27P40305 119 aaPredicted RBP6.17□□□□□ -1.42
HDAC7-229ENST00000549883 SYCNQ0VAF6 134 aa6.17□□□□□ -1.42
HDAC7-229ENST00000549883 LINC00173Q6ZV60 143 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms