RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 TRAV8-4A0A0B4J246 113 aa10.34□□□□□ -0.75
CHMP1A-206ENST00000549139 IGKV2-29A2NJV5 120 aaPredicted RBP10.34□□□□□ -0.75
CHMP1A-206ENST00000549139 FGF6P10767 208 aa10.34□□□□□ -0.75
CHMP1A-206ENST00000549139 ZNF25P17030 456 aaPredicted RBP10.34□□□□□ -0.75
CHMP1A-206ENST00000549139 WFDC2Q14508 124 aa10.34□□□□□ -0.75
CHMP1A-206ENST00000549139 CLPSL2Q6UWE3 100 aa10.34□□□□□ -0.75
CHMP1A-206ENST00000549139 FAT3Q8TDW7 4589 aa10.33□□□□□ -0.76
CHMP1A-206ENST00000549139 C7orf77A4D0Y5 90 aa10.33□□□□□ -0.76
CHMP1A-206ENST00000549139 SERTAD4-AS1Q5TG53 156 aa10.33□□□□□ -0.76
CHMP1A-206ENST00000549139 RNASEKQ6P5S7 137 aaKnown RBP10.33□□□□□ -0.76
CHMP1A-206ENST00000549139 TMEM136Q6ZRR5 245 aa10.33□□□□□ -0.76
CHMP1A-206ENST00000549139 ORMDL3Q8N138 153 aa10.33□□□□□ -0.76
CHMP1A-206ENST00000549139 TCAPO15273 167 aa10.32□□□□□ -0.76
CHMP1A-206ENST00000549139 NPYP01303 97 aa10.32□□□□□ -0.76
CHMP1A-206ENST00000549139 FCER1GP30273 86 aa10.32□□□□□ -0.76
CHMP1A-206ENST00000549139 KRTAP26-1Q6PEX3 210 aa10.32□□□□□ -0.76
CHMP1A-206ENST00000549139 CLRN3Q8NCR9 226 aa10.32□□□□□ -0.76
CHMP1A-206ENST00000549139 FAM30AQ9NZY2 134 aa10.32□□□□□ -0.76
CHMP1A-206ENST00000549139 PRSS47A8MTI9 375 aa10.31□□□□□ -0.76
CHMP1A-206ENST00000549139 LECT2O14960 151 aa10.31□□□□□ -0.76
CHMP1A-206ENST00000549139 S100PP25815 95 aa10.31□□□□□ -0.76
CHMP1A-206ENST00000549139 RHEBQ15382 184 aa10.31□□□□□ -0.76
CHMP1A-206ENST00000549139 MRPL52Q86TS9 123 aaKnown RBP10.31□□□□□ -0.76
CHMP1A-206ENST00000549139 TMEM101Q96IK0 257 aa10.31□□□□□ -0.76
CHMP1A-206ENST00000549139 PRELID3AQ96N28 172 aa10.31□□□□□ -0.76
CHMP1A-206ENST00000549139 SMIM2Q9BVW6 85 aa10.31□□□□□ -0.76
CHMP1A-206ENST00000549139 LAMTOR2Q9Y2Q5 125 aa10.31□□□□□ -0.76
CHMP1A-206ENST00000549139 IGLV5-52A0A0A0MRZ9 124 aa10.3□□□□□ -0.76
CHMP1A-206ENST00000549139 RPS10P5Q9NQ39 176 aa10.3□□□□□ -0.76
CHMP1A-206ENST00000549139 IGLV10-54A0A075B6I4 117 aa10.29□□□□□ -0.76
CHMP1A-206ENST00000549139 SMAGPQ0VAQ4 97 aa10.29□□□□□ -0.76
CHMP1A-206ENST00000549139 C14orf177Q52M58 125 aa10.29□□□□□ -0.76
CHMP1A-206ENST00000549139 TMEM18Q96B42 140 aa10.29□□□□□ -0.76
CHMP1A-206ENST00000549139 CSDC2Q9Y534 153 aaKnown RBP10.29□□□□□ -0.76
CHMP1A-206ENST00000549139 HLA-DQA1P01909 254 aa10.28□□□□□ -0.76
CHMP1A-206ENST00000549139 OR5A1Q8NGJ0 315 aa10.28□□□□□ -0.76
CHMP1A-206ENST00000549139 CDC42SE2Q9NRR3 84 aa10.28□□□□□ -0.76
CHMP1A-206ENST00000549139 APOC3P02656 99 aa10.27□□□□□ -0.77
CHMP1A-206ENST00000549139 PLA2G1BP04054 148 aaKnown RBP10.27□□□□□ -0.77
CHMP1A-206ENST00000549139 NDUFA5Q16718 116 aa10.27□□□□□ -0.77
CHMP1A-206ENST00000549139 UBE2D4Q9Y2X8 147 aa10.27□□□□□ -0.77
CHMP1A-206ENST00000549139 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.26□□□□□ -0.77
CHMP1A-206ENST00000549139 IGKV3OR2-268A0A0C4DH90 116 aa10.26□□□□□ -0.77
CHMP1A-206ENST00000549139 USP17L23D6RBM5 183 aa10.26□□□□□ -0.77
CHMP1A-206ENST00000549139 COX19Q49B96 90 aa10.26□□□□□ -0.77
CHMP1A-206ENST00000549139 DGAT2L7PQ6IED9 249 aa10.26□□□□□ -0.77
CHMP1A-206ENST00000549139 ZNF664Q8N3J9 261 aa10.26□□□□□ -0.77
CHMP1A-206ENST00000549139 TIMM21Q9BVV7 248 aa10.26□□□□□ -0.77
CHMP1A-206ENST00000549139 GNB1LQ9BYB4 327 aa10.26□□□□□ -0.77
CHMP1A-206ENST00000549139 MAP1LC3AQ9H492 121 aa10.26□□□□□ -0.77
CHMP1A-206ENST00000549139 SNAPINO95295 136 aa10.25□□□□□ -0.77
CHMP1A-206ENST00000549139 RAB5AP20339 215 aa10.25□□□□□ -0.77
CHMP1A-206ENST00000549139 SVBPQ8N300 66 aa10.25□□□□□ -0.77
CHMP1A-206ENST00000549139 LINC00959A0A1B0GUT2 108 aa10.24□□□□□ -0.77
CHMP1A-206ENST00000549139 Q6ZSA8 131 aa10.24□□□□□ -0.77
CHMP1A-206ENST00000549139 LINC00528Q8N1L1 170 aa10.24□□□□□ -0.77
CHMP1A-206ENST00000549139 CHCHD10Q8WYQ3 142 aaPredicted RBP10.24□□□□□ -0.77
CHMP1A-206ENST00000549139 LOC389332A0A1B0GUA5 103 aa10.23□□□□□ -0.77
CHMP1A-206ENST00000549139 GAGE12HA6NDE8 117 aa10.23□□□□□ -0.77
CHMP1A-206ENST00000549139 Q8N8P6 123 aa10.23□□□□□ -0.77
CHMP1A-206ENST00000549139 PRSS1P07477 247 aa10.22□□□□□ -0.77
CHMP1A-206ENST00000549139 RPL39P62891 51 aaKnown RBP10.22□□□□□ -0.77
CHMP1A-206ENST00000549139 SS18Q15532 418 aa10.22□□□□□ -0.77
CHMP1A-206ENST00000549139 KIAA1644Q3SXP7 199 aa10.22□□□□□ -0.77
CHMP1A-206ENST00000549139 PLA2G2DQ9UNK4 145 aa10.22□□□□□ -0.77
CHMP1A-206ENST00000549139 K7EMI3 77 aa10.21□□□□□ -0.77
CHMP1A-206ENST00000549139 CCL25O15444 150 aa10.21□□□□□ -0.77
CHMP1A-206ENST00000549139 MT-ND6P03923 174 aa10.21□□□□□ -0.77
CHMP1A-206ENST00000549139 KRTAP10-4P60372 401 aaPredicted RBP10.21□□□□□ -0.77
CHMP1A-206ENST00000549139 SPANXA1Q9NS26 97 aa10.21□□□□□ -0.77
CHMP1A-206ENST00000549139 CFAP161Q6P656 301 aa10.2□□□□□ -0.78
CHMP1A-206ENST00000549139 NXT2Q9NPJ8 142 aaKnown RBP10.2□□□□□ -0.78
CHMP1A-206ENST00000549139 C1orf196B1AJZ1 125 aa10.19□□□□□ -0.78
CHMP1A-206ENST00000549139 MRPS36P82909 103 aaKnown RBP10.19□□□□□ -0.78
CHMP1A-206ENST00000549139 FOXI1Q12951 378 aa10.19□□□□□ -0.78
CHMP1A-206ENST00000549139 PYGO1Q9Y3Y4 419 aa10.19□□□□□ -0.78
CHMP1A-206ENST00000549139 OXTP01178 125 aa10.18□□□□□ -0.78
CHMP1A-206ENST00000549139 IFI27P40305 119 aaPredicted RBP10.18□□□□□ -0.78
CHMP1A-206ENST00000549139 ORMDL2Q53FV1 153 aa10.18□□□□□ -0.78
CHMP1A-206ENST00000549139 CD164L2Q6UWJ8 174 aa10.18□□□□□ -0.78
CHMP1A-206ENST00000549139 Q6ZUT4 128 aa10.18□□□□□ -0.78
CHMP1A-206ENST00000549139 FAM104AQ969W3 186 aa10.18□□□□□ -0.78
CHMP1A-206ENST00000549139 MRPL18Q9H0U6 180 aaKnown RBP10.18□□□□□ -0.78
CHMP1A-206ENST00000549139 TGIF2-C20orf24A0A0A6YYL0 155 aa10.17□□□□□ -0.78
CHMP1A-206ENST00000549139 XCL1P47992 114 aa10.17□□□□□ -0.78
CHMP1A-206ENST00000549139 FABP9Q0Z7S8 132 aa10.17□□□□□ -0.78
CHMP1A-206ENST00000549139 RNASE13Q5GAN3 156 aaKnown RBP10.17□□□□□ -0.78
CHMP1A-206ENST00000549139 ALKBH7Q9BT30 221 aaPredicted RBP10.17□□□□□ -0.78
CHMP1A-206ENST00000549139 hDV102S1A0JD36 115 aa10.16□□□□□ -0.78
CHMP1A-206ENST00000549139 G0S2P27469 103 aa10.16□□□□□ -0.78
CHMP1A-206ENST00000549139 LINC01620Q4KN68 170 aa10.16□□□□□ -0.78
CHMP1A-206ENST00000549139 SLC7A5P1Q8MH63 180 aa10.16□□□□□ -0.78
CHMP1A-206ENST00000549139 C15orf56Q8N910 161 aa10.16□□□□□ -0.78
CHMP1A-206ENST00000549139 C9orf163Q8N9P6 203 aa10.16□□□□□ -0.78
CHMP1A-206ENST00000549139 AP5S1Q9NUS5 200 aa10.16□□□□□ -0.78
CHMP1A-206ENST00000549139 RNF213Q63HN8 5207 aa10.16□□□□□ -0.78
CHMP1A-206ENST00000549139 TRAV13-1A0A0B4J241 112 aa10.15□□□□□ -0.78
CHMP1A-206ENST00000549139 CNBPP62633 177 aaKnown RBP10.15□□□□□ -0.78
CHMP1A-206ENST00000549139 C2orf66Q6UXQ4 117 aa10.15□□□□□ -0.78
CHMP1A-206ENST00000549139 PRSS3P2Q8NHM4 247 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms