RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 ZNF561-AS1K7EIQ3 104 aa12.71□□□□□ -0.37
SSH1-207ENST00000547862 PKIGQ9Y2B9 76 aa12.71□□□□□ -0.37
SSH1-207ENST00000547862 TMEM250H0YL14 139 aa12.7□□□□□ -0.38
SSH1-207ENST00000547862 ESDP10768 282 aa12.7□□□□□ -0.38
SSH1-207ENST00000547862 FAM231DQ6ZW35 169 aa12.7□□□□□ -0.38
SSH1-207ENST00000547862 LINC01600Q96MT4 127 aa12.7□□□□□ -0.38
SSH1-207ENST00000547862 LINC00474Q9P2X8 69 aa12.7□□□□□ -0.38
SSH1-207ENST00000547862 C7orf77A4D0Y5 90 aa12.69□□□□□ -0.38
SSH1-207ENST00000547862 HIGD1CA8MV81 97 aa12.69□□□□□ -0.38
SSH1-207ENST00000547862 SYCNQ0VAF6 134 aa12.69□□□□□ -0.38
SSH1-207ENST00000547862 RNASE13Q5GAN3 156 aaKnown RBP12.69□□□□□ -0.38
SSH1-207ENST00000547862 SMKR1H3BMG3 65 aa12.68□□□□□ -0.38
SSH1-207ENST00000547862 GAGE2BQ13066 116 aa12.68□□□□□ -0.38
SSH1-207ENST00000547862 AMN1Q8IY45 258 aa12.68□□□□□ -0.38
SSH1-207ENST00000547862 SMIM7Q9BQ49 75 aa12.68□□□□□ -0.38
SSH1-207ENST00000547862 A0A1B0GUT8 65 aa12.67□□□□□ -0.38
SSH1-207ENST00000547862 CAMPP49913 170 aa12.67□□□□□ -0.38
SSH1-207ENST00000547862 CT83Q5H943 113 aa12.67□□□□□ -0.38
SSH1-207ENST00000547862 CD164L2Q6UWJ8 174 aa12.67□□□□□ -0.38
SSH1-207ENST00000547862 ZNF664Q8N3J9 261 aa12.67□□□□□ -0.38
SSH1-207ENST00000547862 CDC42SE2Q9NRR3 84 aa12.67□□□□□ -0.38
SSH1-207ENST00000547862 MALP21145 153 aa12.66□□□□□ -0.38
SSH1-207ENST00000547862 FCER1GP30273 86 aa12.66□□□□□ -0.38
SSH1-207ENST00000547862 BLOC1S1P78537 153 aa12.66□□□□□ -0.38
SSH1-207ENST00000547862 REG3GQ6UW15 175 aa12.66□□□□□ -0.38
SSH1-207ENST00000547862 TMEM191AQ9H0A3 160 aa12.66□□□□□ -0.38
SSH1-207ENST00000547862 A0A0J9YXV3 536 aa12.65□□□□□ -0.38
SSH1-207ENST00000547862 SPINK6Q6UWN8 80 aa12.65□□□□□ -0.38
SSH1-207ENST00000547862 MRPL52Q86TS9 123 aaKnown RBP12.65□□□□□ -0.38
SSH1-207ENST00000547862 TSKUQ8WUA8 353 aa12.65□□□□□ -0.38
SSH1-207ENST00000547862 LRP2P98164 4655 aa12.64□□□□□ -0.39
SSH1-207ENST00000547862 IGLV4-69A0A075B6H9 119 aa12.64□□□□□ -0.39
SSH1-207ENST00000547862 RAB4AP20338 218 aa12.64□□□□□ -0.39
SSH1-207ENST00000547862 PTTG1IPP53801 180 aa12.64□□□□□ -0.39
SSH1-207ENST00000547862 POLR2KP53803 58 aaKnown RBP12.64□□□□□ -0.39
SSH1-207ENST00000547862 Q6ZRP5 223 aa12.64□□□□□ -0.39
SSH1-207ENST00000547862 EIF5A2Q9GZV4 153 aaKnown RBP12.64□□□□□ -0.39
SSH1-207ENST00000547862 TRBV27A0A0K0K1C4 114 aa12.63□□□□□ -0.39
SSH1-207ENST00000547862 LOC107984640A0A0U1RRK4 108 aa12.63□□□□□ -0.39
SSH1-207ENST00000547862 LINC01551Q86U37 167 aa12.63□□□□□ -0.39
SSH1-207ENST00000547862 ISOC2Q96AB3 205 aa12.63□□□□□ -0.39
SSH1-207ENST00000547862 TRAV13-1A0A0B4J241 112 aa12.62□□□□□ -0.39
SSH1-207ENST00000547862 COX7A2LO14548 114 aa12.62□□□□□ -0.39
SSH1-207ENST00000547862 CAMK2N2Q96S95 79 aa12.62□□□□□ -0.39
SSH1-207ENST00000547862 hCG_2014768A0A024R1R8 64 aa12.61□□□□□ -0.39
SSH1-207ENST00000547862 ZNF727A8MUV8 499 aa12.61□□□□□ -0.39
SSH1-207ENST00000547862 RPL18AQ02543 176 aaKnown RBP12.61□□□□□ -0.39
SSH1-207ENST00000547862 Q6ZUT4 128 aa12.61□□□□□ -0.39
SSH1-207ENST00000547862 AKAP14Q86UN6 197 aa12.61□□□□□ -0.39
SSH1-207ENST00000547862 RIGQ13278 110 aa12.6□□□□□ -0.39
SSH1-207ENST00000547862 C5orf38Q86SI9 138 aa12.6□□□□□ -0.39
SSH1-207ENST00000547862 UBE2D4Q9Y2X8 147 aa12.6□□□□□ -0.39
SSH1-207ENST00000547862 C1orf196B1AJZ1 125 aa12.59□□□□□ -0.39
SSH1-207ENST00000547862 OSTCQ9NRP0 149 aa12.59□□□□□ -0.39
SSH1-207ENST00000547862 A0A1W2PNN7 141 aa12.58□□□□□ -0.4
SSH1-207ENST00000547862 VCYO14598 125 aa12.58□□□□□ -0.4
SSH1-207ENST00000547862 SUMO2P61956 95 aaKnown RBP12.58□□□□□ -0.4
SSH1-207ENST00000547862 NRACQ8N912 160 aa12.58□□□□□ -0.4
SSH1-207ENST00000547862 NUP35Q8NFH5 326 aa12.58□□□□□ -0.4
SSH1-207ENST00000547862 KIR2DL4Q99706 377 aa12.58□□□□□ -0.4
SSH1-207ENST00000547862 APOMO95445 188 aa12.57□□□□□ -0.4
SSH1-207ENST00000547862 SPAG11BQ08648 103 aa12.57□□□□□ -0.4
SSH1-207ENST00000547862 FAM210AQ96ND0 272 aa12.57□□□□□ -0.4
SSH1-207ENST00000547862 V9GYV3 84 aa12.57□□□□□ -0.4
SSH1-207ENST00000547862 MT-ND6P03923 174 aa12.56□□□□□ -0.4
SSH1-207ENST00000547862 KRTAP10-8P60410 259 aa12.56□□□□□ -0.4
SSH1-207ENST00000547862 SMAGPQ0VAQ4 97 aa12.56□□□□□ -0.4
SSH1-207ENST00000547862 SRSF9Q13242 221 aaKnown RBP eCLIP12.56□□□□□ -0.4
SSH1-207ENST00000547862 OPRPNQ99935 248 aaPredicted RBP12.56□□□□□ -0.4
SSH1-207ENST00000547862 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.55□□□□□ -0.4
SSH1-207ENST00000547862 SRP19P09132 144 aaKnown RBP12.55□□□□□ -0.4
SSH1-207ENST00000547862 C9orf116Q5BN46 136 aaPredicted RBP12.55□□□□□ -0.4
SSH1-207ENST00000547862 MRPL51Q4U2R6 128 aaKnown RBP12.54□□□□□ -0.4
SSH1-207ENST00000547862 PHF5AQ7RTV0 110 aaKnown RBP12.54□□□□□ -0.4
SSH1-207ENST00000547862 PSORS1C2Q9UIG4 136 aa12.54□□□□□ -0.4
SSH1-207ENST00000547862 PPP1R17O96001 155 aa12.53□□□□□ -0.4
SSH1-207ENST00000547862 ADIRFQ15847 76 aa12.53□□□□□ -0.4
SSH1-207ENST00000547862 CSDC2Q9Y534 153 aaKnown RBP12.53□□□□□ -0.4
SSH1-207ENST00000547862 PPP1R2P9O14990 202 aa12.52□□□□□ -0.41
SSH1-207ENST00000547862 RPL39P62891 51 aaKnown RBP12.52□□□□□ -0.41
SSH1-207ENST00000547862 C1orf137Q5JT78 98 aa12.52□□□□□ -0.41
SSH1-207ENST00000547862 ORAOV1Q8WV07 137 aa12.52□□□□□ -0.41
SSH1-207ENST00000547862 TMEM18Q96B42 140 aa12.52□□□□□ -0.41
SSH1-207ENST00000547862 C2orf48Q96LS8 159 aa12.52□□□□□ -0.41
SSH1-207ENST00000547862 NAT8BQ9UHF3 227 aa12.52□□□□□ -0.41
SSH1-207ENST00000547862 FAM104BQ5XKR9 115 aa12.5□□□□□ -0.41
SSH1-207ENST00000547862 RPL23P62829 140 aaKnown RBP12.49□□□□□ -0.41
SSH1-207ENST00000547862 CKS2P33552 79 aa12.48□□□□□ -0.41
SSH1-207ENST00000547862 TMEM241Q24JQ0 296 aa12.48□□□□□ -0.41
SSH1-207ENST00000547862 TIMM21Q9BVV7 248 aa12.48□□□□□ -0.41
SSH1-207ENST00000547862 FAM74A3Q4VXF1 159 aa12.47□□□□□ -0.41
SSH1-207ENST00000547862 OR10D4PQ8NGN7 298 aa12.47□□□□□ -0.41
SSH1-207ENST00000547862 IFITM10A6NMD0 228 aa12.46□□□□□ -0.41
SSH1-207ENST00000547862 MRPL54Q6P161 138 aaKnown RBP12.46□□□□□ -0.41
SSH1-207ENST00000547862 FAM19A5Q7Z5A7 132 aaPredicted RBP12.46□□□□□ -0.41
SSH1-207ENST00000547862 SMIM2Q9BVW6 85 aa12.46□□□□□ -0.41
SSH1-207ENST00000547862 RNF213Q63HN8 5207 aa12.46□□□□□ -0.42
SSH1-207ENST00000547862 FAM168BA1KXE4 195 aa12.45□□□□□ -0.42
SSH1-207ENST00000547862 TNFRSF6BO95407 300 aa12.45□□□□□ -0.42
SSH1-207ENST00000547862 C20orf78Q9BR46 151 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms