RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 H7C423 109 aa7.76□□□□□ -1.17
RAB5C-204ENST00000547517 FCER1GP30273 86 aa7.76□□□□□ -1.17
RAB5C-204ENST00000547517 CKS2P33552 79 aa7.76□□□□□ -1.17
RAB5C-204ENST00000547517 AKR1D1P51857 326 aa7.76□□□□□ -1.17
RAB5C-204ENST00000547517 HAMPP81172 84 aa7.76□□□□□ -1.17
RAB5C-204ENST00000547517 KRTAP26-1Q6PEX3 210 aa7.76□□□□□ -1.17
RAB5C-204ENST00000547517 ATP5L2Q7Z4Y8 100 aa7.76□□□□□ -1.17
RAB5C-204ENST00000547517 TRAV8-4A0A0B4J246 113 aa7.75□□□□□ -1.17
RAB5C-204ENST00000547517 VCYO14598 125 aa7.75□□□□□ -1.17
RAB5C-204ENST00000547517 ESDP10768 282 aa7.75□□□□□ -1.17
RAB5C-204ENST00000547517 ZNF25P17030 456 aaPredicted RBP7.75□□□□□ -1.17
RAB5C-204ENST00000547517 LINC01620Q4KN68 170 aa7.75□□□□□ -1.17
RAB5C-204ENST00000547517 C14orf177Q52M58 125 aa7.75□□□□□ -1.17
RAB5C-204ENST00000547517 TNFRSF6BO95407 300 aa7.74□□□□□ -1.17
RAB5C-204ENST00000547517 XGP55808 180 aa7.74□□□□□ -1.17
RAB5C-204ENST00000547517 OR5A1Q8NGJ0 315 aa7.74□□□□□ -1.17
RAB5C-204ENST00000547517 TMEM101Q96IK0 257 aa7.74□□□□□ -1.17
RAB5C-204ENST00000547517 KIR2DL4Q99706 377 aa7.74□□□□□ -1.17
RAB5C-204ENST00000547517 DNAH8Q96JB1 4490 aa7.74□□□□□ -1.17
RAB5C-204ENST00000547517 C5orf52A6NGY3 159 aa7.73□□□□□ -1.17
RAB5C-204ENST00000547517 NPYP01303 97 aa7.73□□□□□ -1.17
RAB5C-204ENST00000547517 C20orf78Q9BR46 151 aa7.73□□□□□ -1.17
RAB5C-204ENST00000547517 KRTAP4-5Q9BYR2 181 aa7.73□□□□□ -1.17
RAB5C-204ENST00000547517 TRBV24-1A0A075B6N3 115 aa7.72□□□□□ -1.17
RAB5C-204ENST00000547517 GAGE12HA6NDE8 117 aa7.72□□□□□ -1.17
RAB5C-204ENST00000547517 PPBPP02775 128 aa7.72□□□□□ -1.17
RAB5C-204ENST00000547517 PRSS1P07477 247 aa7.72□□□□□ -1.17
RAB5C-204ENST00000547517 S100PP25815 95 aa7.72□□□□□ -1.17
RAB5C-204ENST00000547517 ORMDL3Q8N138 153 aa7.72□□□□□ -1.17
RAB5C-204ENST00000547517 Q8N1X5 172 aa7.72□□□□□ -1.17
RAB5C-204ENST00000547517 C12orf57Q99622 126 aa7.72□□□□□ -1.17
RAB5C-204ENST00000547517 SMIM2Q9BVW6 85 aa7.72□□□□□ -1.17
RAB5C-204ENST00000547517 FAM30AQ9NZY2 134 aa7.72□□□□□ -1.17
RAB5C-204ENST00000547517 MRPL52Q86TS9 123 aaKnown RBP7.71□□□□□ -1.18
RAB5C-204ENST00000547517 CHCHD10Q8WYQ3 142 aaPredicted RBP7.71□□□□□ -1.18
RAB5C-204ENST00000547517 PRELID3AQ96N28 172 aa7.71□□□□□ -1.18
RAB5C-204ENST00000547517 PHOX2AO14813 284 aa7.7□□□□□ -1.18
RAB5C-204ENST00000547517 RPL32P62910 135 aaKnown RBP7.7□□□□□ -1.18
RAB5C-204ENST00000547517 DGAT2L7PQ6IED9 249 aa7.7□□□□□ -1.18
RAB5C-204ENST00000547517 TMEM136Q6ZRR5 245 aa7.7□□□□□ -1.18
RAB5C-204ENST00000547517 YPEL4Q96NS1 127 aa7.7□□□□□ -1.18
RAB5C-204ENST00000547517 UBE2D4Q9Y2X8 147 aa7.7□□□□□ -1.18
RAB5C-204ENST00000547517 FAT1Q14517 4588 aa7.69□□□□□ -1.18
RAB5C-204ENST00000547517 hDV102S1A0JD36 115 aa7.69□□□□□ -1.18
RAB5C-204ENST00000547517 TCAPO15273 167 aa7.69□□□□□ -1.18
RAB5C-204ENST00000547517 S100A2P29034 98 aa7.69□□□□□ -1.18
RAB5C-204ENST00000547517 XCL1P47992 114 aa7.69□□□□□ -1.18
RAB5C-204ENST00000547517 SNRPEP62304 92 aaKnown RBP7.69□□□□□ -1.18
RAB5C-204ENST00000547517 SMAGPQ0VAQ4 97 aa7.69□□□□□ -1.18
RAB5C-204ENST00000547517 RNASE13Q5GAN3 156 aaKnown RBP7.69□□□□□ -1.18
RAB5C-204ENST00000547517 ZNF664Q8N3J9 261 aa7.69□□□□□ -1.18
RAB5C-204ENST00000547517 IMMP2LQ96T52 175 aa7.69□□□□□ -1.18
RAB5C-204ENST00000547517 CDC42SE2Q9NRR3 84 aa7.69□□□□□ -1.18
RAB5C-204ENST00000547517 LINC00959A0A1B0GUT2 108 aa7.68□□□□□ -1.18
RAB5C-204ENST00000547517 CCL25O15444 150 aa7.68□□□□□ -1.18
RAB5C-204ENST00000547517 SMR3BP02814 79 aaPredicted RBP7.68□□□□□ -1.18
RAB5C-204ENST00000547517 FABP9Q0Z7S8 132 aa7.68□□□□□ -1.18
RAB5C-204ENST00000547517 Q6ZSA8 131 aa7.68□□□□□ -1.18
RAB5C-204ENST00000547517 Q6ZUT4 128 aa7.68□□□□□ -1.18
RAB5C-204ENST00000547517 C15orf56Q8N910 161 aa7.68□□□□□ -1.18
RAB5C-204ENST00000547517 TMEM18Q96B42 140 aa7.68□□□□□ -1.18
RAB5C-204ENST00000547517 LOC389332A0A1B0GUA5 103 aa7.67□□□□□ -1.18
RAB5C-204ENST00000547517 EPM2AB3EWF7 344 aa7.67□□□□□ -1.18
RAB5C-204ENST00000547517 RPL39P62891 51 aaKnown RBP7.67□□□□□ -1.18
RAB5C-204ENST00000547517 FOXI1Q12951 378 aa7.67□□□□□ -1.18
RAB5C-204ENST00000547517 SS18Q15532 418 aa7.67□□□□□ -1.18
RAB5C-204ENST00000547517 HIGD2BQ4VC39 106 aa7.67□□□□□ -1.18
RAB5C-204ENST00000547517 MAP1LC3AQ9H492 121 aa7.67□□□□□ -1.18
RAB5C-204ENST00000547517 AP5S1Q9NUS5 200 aa7.67□□□□□ -1.18
RAB5C-204ENST00000547517 Q5VSD8 79 aa7.66□□□□□ -1.18
RAB5C-204ENST00000547517 LAMTOR2Q9Y2Q5 125 aa7.66□□□□□ -1.18
RAB5C-204ENST00000547517 CSDC2Q9Y534 153 aaKnown RBP7.66□□□□□ -1.18
RAB5C-204ENST00000547517 TRAV9-1A0A075B6T8 112 aa7.65□□□□□ -1.18
RAB5C-204ENST00000547517 TRAV13-1A0A0B4J241 112 aa7.65□□□□□ -1.18
RAB5C-204ENST00000547517 CNBPP62633 177 aaKnown RBP7.65□□□□□ -1.18
RAB5C-204ENST00000547517 CFAP161Q6P656 301 aa7.65□□□□□ -1.18
RAB5C-204ENST00000547517 SCXQ7RTU7 201 aa7.65□□□□□ -1.18
RAB5C-204ENST00000547517 TIMM21Q9BVV7 248 aa7.65□□□□□ -1.18
RAB5C-204ENST00000547517 C9orf163Q8N9P6 203 aa7.64□□□□□ -1.19
RAB5C-204ENST00000547517 SPANXA1Q9NS26 97 aa7.64□□□□□ -1.19
RAB5C-204ENST00000547517 GVQW2A0A096LPI5 108 aaPredicted RBP7.63□□□□□ -1.19
RAB5C-204ENST00000547517 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.63□□□□□ -1.19
RAB5C-204ENST00000547517 SLPIP03973 132 aa7.63□□□□□ -1.19
RAB5C-204ENST00000547517 KIAA1644Q3SXP7 199 aa7.63□□□□□ -1.19
RAB5C-204ENST00000547517 CD164L2Q6UWJ8 174 aa7.63□□□□□ -1.19
RAB5C-204ENST00000547517 Q8N8P6 123 aa7.63□□□□□ -1.19
RAB5C-204ENST00000547517 OPRPNQ99935 248 aaPredicted RBP7.63□□□□□ -1.19
RAB5C-204ENST00000547517 CHAC1Q9BUX1 264 aa7.63□□□□□ -1.19
RAB5C-204ENST00000547517 KRTAP3-3Q9BYR6 98 aa7.63□□□□□ -1.19
RAB5C-204ENST00000547517 KRTAP3-2Q9BYR7 98 aa7.63□□□□□ -1.19
RAB5C-204ENST00000547517 PRSS47A8MTI9 375 aa7.62□□□□□ -1.19
RAB5C-204ENST00000547517 IFI27P40305 119 aaPredicted RBP7.62□□□□□ -1.19
RAB5C-204ENST00000547517 IGHV3-64A0A075B6Q5 118 aa7.61□□□□□ -1.19
RAB5C-204ENST00000547517 IGHV1-58A0A0C4DH39 117 aa7.61□□□□□ -1.19
RAB5C-204ENST00000547517 PCP4L1A6NKN8 68 aa7.61□□□□□ -1.19
RAB5C-204ENST00000547517 IFITM10A6NMD0 228 aa7.61□□□□□ -1.19
RAB5C-204ENST00000547517 FAM229AH3BQW9 127 aa7.61□□□□□ -1.19
RAB5C-204ENST00000547517 HIST1H2BKO60814 126 aa7.61□□□□□ -1.19
RAB5C-204ENST00000547517 HIST1H2BJP06899 126 aa7.61□□□□□ -1.19
RAB5C-204ENST00000547517 HIST1H2BOP23527 126 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms