RNA–Protein interactions for RNA: ENST00000546710.2

LINC02404-201, Transcript of long intergenic non-protein coding RNA 2404, humanhuman

TSL 5 BASIC

Gene LINC02404, Length 1,188 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02404-201ENST00000546710 ERCC8Q13216 396 aa3.12□□□□□ -1.91
LINC02404-201ENST00000546710 KLK9Q2XQG4 91 aa3.12□□□□□ -1.91
LINC02404-201ENST00000546710 TTC32Q5I0X7 151 aa3.12□□□□□ -1.91
LINC02404-201ENST00000546710 LYZL1Q6UWQ5 148 aa3.12□□□□□ -1.91
LINC02404-201ENST00000546710 FER1L6-AS1Q8NA97 138 aa3.12□□□□□ -1.91
LINC02404-201ENST00000546710 OR10J6PQ8NGY7 276 aa3.12□□□□□ -1.91
LINC02404-201ENST00000546710 USMG5Q96IX5 58 aa3.12□□□□□ -1.91
LINC02404-201ENST00000546710 C20orf144Q9BQM9 153 aa3.12□□□□□ -1.91
LINC02404-201ENST00000546710 C2orf88Q9BSF0 95 aa3.12□□□□□ -1.91
LINC02404-201ENST00000546710 UQCR10Q9UDW1 63 aa3.12□□□□□ -1.91
LINC02404-201ENST00000546710 KLK9Q9UKQ9 250 aa3.12□□□□□ -1.91
LINC02404-201ENST00000546710 TIMM8BQ9Y5J9 83 aaPredicted RBP3.12□□□□□ -1.91
LINC02404-201ENST00000546710 TNXBP22105 4242 aa3.12□□□□□ -1.91
LINC02404-201ENST00000546710 IGHV3OR16-13A0A075B7E8 117 aa3.11□□□□□ -1.91
LINC02404-201ENST00000546710 IGHV3-49A0A0A0MS15 119 aa3.11□□□□□ -1.91
LINC02404-201ENST00000546710 IGHV3-74A0A0B4J1X5 117 aa3.11□□□□□ -1.91
LINC02404-201ENST00000546710 KIR2DL5BA0A0G2JN68 375 aa3.11□□□□□ -1.91
LINC02404-201ENST00000546710 KIR2DL5BA0A0G2JPC4 375 aa3.11□□□□□ -1.91
LINC02404-201ENST00000546710 LOC389332A0A1B0GUA5 103 aa3.11□□□□□ -1.91
LINC02404-201ENST00000546710 NDUFA4O00483 81 aa3.11□□□□□ -1.91
LINC02404-201ENST00000546710 HLA-DMBP28068 263 aa3.11□□□□□ -1.91
LINC02404-201ENST00000546710 CKS2P33552 79 aa3.11□□□□□ -1.91
LINC02404-201ENST00000546710 CRIP1P50238 77 aa3.11□□□□□ -1.91
LINC02404-201ENST00000546710 HNRNPA3P51991 378 aaKnown RBP3.11□□□□□ -1.91
LINC02404-201ENST00000546710 HIST1H1AQ02539 215 aaPredicted RBP3.11□□□□□ -1.91
LINC02404-201ENST00000546710 BATFQ16520 125 aa3.11□□□□□ -1.91
LINC02404-201ENST00000546710 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.11□□□□□ -1.91
LINC02404-201ENST00000546710 Q6ZN92 141 aa3.11□□□□□ -1.91
LINC02404-201ENST00000546710 Q6ZRU5 148 aa3.11□□□□□ -1.91
LINC02404-201ENST00000546710 MRPL52Q86TS9 123 aaKnown RBP3.11□□□□□ -1.91
LINC02404-201ENST00000546710 KIR2DL5AQ8N109 375 aa3.11□□□□□ -1.91
LINC02404-201ENST00000546710 ORMDL3Q8N138 153 aa3.11□□□□□ -1.91
LINC02404-201ENST00000546710 ZNF738Q8NE65 137 aa3.11□□□□□ -1.91
LINC02404-201ENST00000546710 OR10AG1Q8NH19 301 aa3.11□□□□□ -1.91
LINC02404-201ENST00000546710 Q8TAT8 98 aa3.11□□□□□ -1.91
LINC02404-201ENST00000546710 MRPL53Q96EL3 112 aaKnown RBP3.11□□□□□ -1.91
LINC02404-201ENST00000546710 PRELID3AQ96N28 172 aa3.11□□□□□ -1.91
LINC02404-201ENST00000546710 TMEM191AQ9H0A3 160 aa3.11□□□□□ -1.91
LINC02404-201ENST00000546710 LINC00527Q9UJ94 153 aa3.11□□□□□ -1.91
LINC02404-201ENST00000546710 IGHV1-24A0A0C4DH33 117 aa3.1□□□□□ -1.91
LINC02404-201ENST00000546710 MUC21A0A0G2JKD1 596 aa3.1□□□□□ -1.91
LINC02404-201ENST00000546710 MUC21A0A140T8X8 626 aa3.1□□□□□ -1.91
LINC02404-201ENST00000546710 A0A1B0GV90 55 aa3.1□□□□□ -1.91
LINC02404-201ENST00000546710 H0Y8G0 127 aa3.1□□□□□ -1.91
LINC02404-201ENST00000546710 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
LINC02404-201ENST00000546710 IGHV3-11P01762 117 aa3.1□□□□□ -1.91
LINC02404-201ENST00000546710 IGHG2P01859 326 aa3.1□□□□□ -1.91
LINC02404-201ENST00000546710 SAMD13Q5VXD3 122 aa3.1□□□□□ -1.91
LINC02404-201ENST00000546710 FAM104BQ5XKR9 115 aa3.1□□□□□ -1.91
LINC02404-201ENST00000546710 PET117Q6UWS5 81 aa3.1□□□□□ -1.91
LINC02404-201ENST00000546710 ATOH7Q8N100 152 aa3.1□□□□□ -1.91
LINC02404-201ENST00000546710 RNF182Q8N6D2 247 aa3.1□□□□□ -1.91
LINC02404-201ENST00000546710 GATD1Q8NB37 220 aa3.1□□□□□ -1.91
LINC02404-201ENST00000546710 KIR2DL5BQ8NHK3 375 aa3.1□□□□□ -1.91
LINC02404-201ENST00000546710 LINC00477Q96M19 166 aa3.1□□□□□ -1.91
LINC02404-201ENST00000546710 MAP1LC3AQ9H492 121 aa3.1□□□□□ -1.91
LINC02404-201ENST00000546710 TMEM213A2RRL7 107 aa3.09□□□□□ -1.91
LINC02404-201ENST00000546710 OR4C46A6NHA9 309 aa3.09□□□□□ -1.91
LINC02404-201ENST00000546710 D6R8Y8 96 aa3.09□□□□□ -1.91
LINC02404-201ENST00000546710 SYS1-DBNDD2H3BUS1 97 aa3.09□□□□□ -1.91
LINC02404-201ENST00000546710 TCAPO15273 167 aa3.09□□□□□ -1.91
LINC02404-201ENST00000546710 PPBPP02775 128 aa3.09□□□□□ -1.91
LINC02404-201ENST00000546710 S100A4P26447 101 aaKnown RBP3.09□□□□□ -1.91
LINC02404-201ENST00000546710 CTRLP40313 264 aa3.09□□□□□ -1.91
LINC02404-201ENST00000546710 ZNF80P51504 273 aaPredicted RBP3.09□□□□□ -1.91
LINC02404-201ENST00000546710 CACNG7P62955 275 aa3.09□□□□□ -1.91
LINC02404-201ENST00000546710 KRTAP6-3Q3LI67 103 aa3.09□□□□□ -1.91
LINC02404-201ENST00000546710 TDRG1Q3Y452 100 aa3.09□□□□□ -1.91
LINC02404-201ENST00000546710 MRPL51Q4U2R6 128 aaKnown RBP3.09□□□□□ -1.91
LINC02404-201ENST00000546710 COL5A1-AS1Q5SY13 56 aa3.09□□□□□ -1.91
LINC02404-201ENST00000546710 SPANXN1Q5VSR9 72 aa3.09□□□□□ -1.91
LINC02404-201ENST00000546710 EBLN2Q6P2I7 272 aa3.09□□□□□ -1.91
LINC02404-201ENST00000546710 ZNF493Q6ZR52 646 aa3.09□□□□□ -1.91
LINC02404-201ENST00000546710 Q8N976 141 aa3.09□□□□□ -1.91
LINC02404-201ENST00000546710 AGPAT4-IT1Q9H0P7 198 aa3.09□□□□□ -1.91
LINC02404-201ENST00000546710 ST20Q9HBF5 79 aa3.09□□□□□ -1.91
LINC02404-201ENST00000546710 LINC00846Q9NV44 126 aa3.09□□□□□ -1.91
LINC02404-201ENST00000546710 PEF1Q9UBV8 284 aaKnown RBP3.09□□□□□ -1.91
LINC02404-201ENST00000546710 UFC1Q9Y3C8 167 aa3.09□□□□□ -1.91
LINC02404-201ENST00000546710 LENEPQ9Y5L5 61 aa3.09□□□□□ -1.91
LINC02404-201ENST00000546710 IGKV3-7A0A075B6H7 116 aa3.08□□□□□ -1.92
LINC02404-201ENST00000546710 TRAV8-2A0A0B4J237 113 aa3.08□□□□□ -1.92
LINC02404-201ENST00000546710 TRAV21A0A0B4J279 112 aa3.08□□□□□ -1.92
LINC02404-201ENST00000546710 IGHV7-4-1A0A0J9YVY3 117 aa3.08□□□□□ -1.92
LINC02404-201ENST00000546710 C2orf70A6NJV1 201 aa3.08□□□□□ -1.92
LINC02404-201ENST00000546710 SMKR1H3BMG3 65 aa3.08□□□□□ -1.92
LINC02404-201ENST00000546710 IGHG4P01861 327 aa3.08□□□□□ -1.92
LINC02404-201ENST00000546710 HBDP02042 147 aa3.08□□□□□ -1.92
LINC02404-201ENST00000546710 CD7P09564 240 aa3.08□□□□□ -1.92
LINC02404-201ENST00000546710 IGLC6P0CF74 106 aa3.08□□□□□ -1.92
LINC02404-201ENST00000546710 IGLC3P0DOY3 106 aa3.08□□□□□ -1.92
LINC02404-201ENST00000546710 RNASE4P34096 147 aaKnown RBP3.08□□□□□ -1.92
LINC02404-201ENST00000546710 IFI27P40305 119 aaPredicted RBP3.08□□□□□ -1.92
LINC02404-201ENST00000546710 NUTF2P61970 127 aaKnown RBP3.08□□□□□ -1.92
LINC02404-201ENST00000546710 SLC25A34Q6PIV7 304 aa3.08□□□□□ -1.92
LINC02404-201ENST00000546710 AMN1Q8IY45 258 aa3.08□□□□□ -1.92
LINC02404-201ENST00000546710 OR8A1Q8NGG7 326 aa3.08□□□□□ -1.92
LINC02404-201ENST00000546710 PMCHL2Q9BQD1 86 aa3.08□□□□□ -1.92
LINC02404-201ENST00000546710 RHPN1-AS1Q9BWJ2 59 aa3.08□□□□□ -1.92
LINC02404-201ENST00000546710 SNHG12Q9BXW3 62 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms