RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 ZC2HC1BQ5TFG8 222 aa13.52□□□□□ -0.25
SKP2-208ENST00000546211 CHCHD5Q9BSY4 110 aa13.52□□□□□ -0.25
SKP2-208ENST00000546211 PRO1933Q9H354 126 aa13.52□□□□□ -0.25
SKP2-208ENST00000546211 MRPS36P82909 103 aaKnown RBP13.51□□□□□ -0.25
SKP2-208ENST00000546211 TMEM101Q96IK0 257 aa13.51□□□□□ -0.25
SKP2-208ENST00000546211 CSDC2Q9Y534 153 aaKnown RBP13.51□□□□□ -0.25
SKP2-208ENST00000546211 Q6ZUT4 128 aa13.5□□□□□ -0.25
SKP2-208ENST00000546211 AMELXQ99217 191 aa13.5□□□□□ -0.25
SKP2-208ENST00000546211 DNHD1Q96M86 4753 aa13.5□□□□□ -0.25
SKP2-208ENST00000546211 PCP4L1A6NKN8 68 aa13.49□□□□□ -0.25
SKP2-208ENST00000546211 GAGE6Q13070 117 aa13.49□□□□□ -0.25
SKP2-208ENST00000546211 OR5A1Q8NGJ0 315 aa13.49□□□□□ -0.25
SKP2-208ENST00000546211 FAM104AQ969W3 186 aa13.49□□□□□ -0.25
SKP2-208ENST00000546211 TRAV10A0A0B4J240 114 aa13.49□□□□□ -0.25
SKP2-208ENST00000546211 ZNF25P17030 456 aaPredicted RBP13.49□□□□□ -0.25
SKP2-208ENST00000546211 C2orf88Q9BSF0 95 aa13.49□□□□□ -0.25
SKP2-208ENST00000546211 NHLRC4P0CG21 123 aaPredicted RBP13.48□□□□□ -0.25
SKP2-208ENST00000546211 DEFA6Q01524 100 aa13.48□□□□□ -0.25
SKP2-208ENST00000546211 RNASE13Q5GAN3 156 aaKnown RBP13.48□□□□□ -0.25
SKP2-208ENST00000546211 IGLV4-69A0A075B6H9 119 aa13.46□□□□□ -0.25
SKP2-208ENST00000546211 STPG4Q8N801 248 aa13.46□□□□□ -0.25
SKP2-208ENST00000546211 TENM3Q9P273 2699 aa13.45□□□□□ -0.26
SKP2-208ENST00000546211 CDC42SE2Q9NRR3 84 aa13.45□□□□□ -0.26
SKP2-208ENST00000546211 TMEM262E9PQX1 116 aa13.45□□□□□ -0.26
SKP2-208ENST00000546211 C11orf86A6NJI1 115 aa13.44□□□□□ -0.26
SKP2-208ENST00000546211 LELP1Q5T871 98 aa13.44□□□□□ -0.26
SKP2-208ENST00000546211 HUWE1Q7Z6Z7 4374 aaKnown RBP13.44□□□□□ -0.26
SKP2-208ENST00000546211 IGLC3P0DOY3 106 aa13.43□□□□□ -0.26
SKP2-208ENST00000546211 ANKRD39Q53RE8 183 aa13.43□□□□□ -0.26
SKP2-208ENST00000546211 NFE4Q86UQ8 179 aa13.43□□□□□ -0.26
SKP2-208ENST00000546211 CHAC1Q9BUX1 264 aa13.43□□□□□ -0.26
SKP2-208ENST00000546211 A0A0J9YXV3 536 aa13.42□□□□□ -0.26
SKP2-208ENST00000546211 TIRAPP58753 221 aa13.42□□□□□ -0.26
SKP2-208ENST00000546211 LYPD5Q6UWN5 251 aa13.42□□□□□ -0.26
SKP2-208ENST00000546211 A0A1B0GUV1 79 aa13.41□□□□□ -0.26
SKP2-208ENST00000546211 UBE2D1P51668 147 aa13.41□□□□□ -0.26
SKP2-208ENST00000546211 TCTAP57738 103 aa13.41□□□□□ -0.26
SKP2-208ENST00000546211 TMEM170BQ5T4T1 132 aa13.41□□□□□ -0.26
SKP2-208ENST00000546211 C14orf144Q96I85 54 aa13.41□□□□□ -0.26
SKP2-208ENST00000546211 IGLV4-60A0A075B6I1 120 aa13.4□□□□□ -0.26
SKP2-208ENST00000546211 C15orf53Q8NAA6 179 aa13.4□□□□□ -0.26
SKP2-208ENST00000546211 UQCR10Q9UDW1 63 aa13.4□□□□□ -0.26
SKP2-208ENST00000546211 TINCRA0A1B0GVN0 87 aa13.39□□□□□ -0.27
SKP2-208ENST00000546211 RBX1P62877 108 aa13.39□□□□□ -0.27
SKP2-208ENST00000546211 MPV17L2Q567V2 206 aa13.39□□□□□ -0.27
SKP2-208ENST00000546211 MIEN1Q9BRT3 115 aa13.39□□□□□ -0.27
SKP2-208ENST00000546211 TRAV8-6A0A0B4J262 113 aa13.38□□□□□ -0.27
SKP2-208ENST00000546211 DDTP30046 118 aa13.38□□□□□ -0.27
SKP2-208ENST00000546211 NMUP48645 174 aa13.38□□□□□ -0.27
SKP2-208ENST00000546211 HERVK_113P61574 105 aa13.38□□□□□ -0.27
SKP2-208ENST00000546211 TRAV13-1A0A0B4J241 112 aa13.37□□□□□ -0.27
SKP2-208ENST00000546211 SEC11AP67812 179 aa13.37□□□□□ -0.27
SKP2-208ENST00000546211 GEMIN7Q9H840 131 aaKnown RBP13.37□□□□□ -0.27
SKP2-208ENST00000546211 ZNF22P17026 224 aaPredicted RBP13.37□□□□□ -0.27
SKP2-208ENST00000546211 COX8AP10176 69 aa13.36□□□□□ -0.27
SKP2-208ENST00000546211 SLC25A34Q6PIV7 304 aa13.36□□□□□ -0.27
SKP2-208ENST00000546211 FAM19A3Q7Z5A8 133 aa13.36□□□□□ -0.27
SKP2-208ENST00000546211 DNAH9Q9NYC9 4486 aa13.35□□□□□ -0.27
SKP2-208ENST00000546211 IGKV2D-26A0A0A0MRZ7 120 aa13.34□□□□□ -0.27
SKP2-208ENST00000546211 E9PLD3 99 aa13.34□□□□□ -0.27
SKP2-208ENST00000546211 HERVK_113P63121 156 aa13.34□□□□□ -0.27
SKP2-208ENST00000546211 ESRGQ1W209 222 aa13.34□□□□□ -0.27
SKP2-208ENST00000546211 IGKV3OR2-268A0A0C4DH90 116 aa13.33□□□□□ -0.28
SKP2-208ENST00000546211 IGLL5B9A064 214 aa13.33□□□□□ -0.28
SKP2-208ENST00000546211 LINC00242Q5T6M2 205 aa13.33□□□□□ -0.28
SKP2-208ENST00000546211 LINC00469Q8N7U9 141 aa13.33□□□□□ -0.28
SKP2-208ENST00000546211 TMEM223A0PJW6 202 aa13.32□□□□□ -0.28
SKP2-208ENST00000546211 ANGP03950 147 aaKnown RBP13.32□□□□□ -0.28
SKP2-208ENST00000546211 IGLV5-45A0A087WSX0 123 aa13.31□□□□□ -0.28
SKP2-208ENST00000546211 H3BRM9 83 aa13.31□□□□□ -0.28
SKP2-208ENST00000546211 HNRNPA3P51991 378 aaKnown RBP13.31□□□□□ -0.28
SKP2-208ENST00000546211 PCP2Q8IVA1 136 aa13.31□□□□□ -0.28
SKP2-208ENST00000546211 COX6A2Q02221 97 aa13.3□□□□□ -0.28
SKP2-208ENST00000546211 BOD1L2Q8IYS8 172 aa13.3□□□□□ -0.28
SKP2-208ENST00000546211 LINC00959A0A1B0GUT2 108 aa13.29□□□□□ -0.28
SKP2-208ENST00000546211 LINC00587B1AMM8 73 aa13.29□□□□□ -0.28
SKP2-208ENST00000546211 DLEU1O43261 78 aa13.29□□□□□ -0.28
SKP2-208ENST00000546211 LINC00269Q8N2A0 174 aa13.29□□□□□ -0.28
SKP2-208ENST00000546211 Q8N3U1 123 aa13.29□□□□□ -0.28
SKP2-208ENST00000546211 CDKN2A-AS1Q9UH64 79 aa13.29□□□□□ -0.28
SKP2-208ENST00000546211 SS18Q15532 418 aa13.28□□□□□ -0.28
SKP2-208ENST00000546211 WFDC10BQ8IUB3 73 aa13.28□□□□□ -0.28
SKP2-208ENST00000546211 TP73-AS1Q9UF72 201 aa13.28□□□□□ -0.28
SKP2-208ENST00000546211 CLPSL2Q6UWE3 100 aa13.28□□□□□ -0.28
SKP2-208ENST00000546211 IGHV3-64A0A075B6Q5 118 aa13.27□□□□□ -0.29
SKP2-208ENST00000546211 LEPROTO15243 131 aa13.27□□□□□ -0.29
SKP2-208ENST00000546211 CCL25O15444 150 aa13.27□□□□□ -0.29
SKP2-208ENST00000546211 REG3AQ06141 175 aa13.27□□□□□ -0.29
SKP2-208ENST00000546211 TTTY13Q9BZ97 58 aa13.27□□□□□ -0.29
SKP2-208ENST00000546211 IGHV3-30P01768 117 aa13.26□□□□□ -0.29
SKP2-208ENST00000546211 IGHV3-33P01772 117 aa13.26□□□□□ -0.29
SKP2-208ENST00000546211 SPINK8P0C7L1 97 aa13.26□□□□□ -0.29
SKP2-208ENST00000546211 IGHV3-30-3P0DP02 117 aa13.26□□□□□ -0.29
SKP2-208ENST00000546211 IGHV3-30-5P0DP03 117 aa13.26□□□□□ -0.29
SKP2-208ENST00000546211 CCL18P55774 89 aa13.26□□□□□ -0.29
SKP2-208ENST00000546211 PLEKHB2Q96CS7 222 aa13.26□□□□□ -0.29
SKP2-208ENST00000546211 IGHV1-58A0A0C4DH39 117 aa13.25□□□□□ -0.29
SKP2-208ENST00000546211 J3QQQ9 107 aa13.24□□□□□ -0.29
SKP2-208ENST00000546211 LGALS3P17931 250 aaKnown RBP13.24□□□□□ -0.29
SKP2-208ENST00000546211 KLK12Q9UKR0 248 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms