RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 LINC00310P59036 64 aa4.58□□□□□ -1.68
CDCA3-209ENST00000544610 Q6ZR54 194 aa4.58□□□□□ -1.68
CDCA3-209ENST00000544610 SLC25A29Q8N8R3 303 aa4.58□□□□□ -1.68
CDCA3-209ENST00000544610 TMEM18Q96B42 140 aa4.58□□□□□ -1.68
CDCA3-209ENST00000544610 HSBP1O75506 76 aa4.57□□□□□ -1.68
CDCA3-209ENST00000544610 DEFB130BP0DP73 79 aa4.57□□□□□ -1.68
CDCA3-209ENST00000544610 DEFB130AP0DP74 79 aa4.57□□□□□ -1.68
CDCA3-209ENST00000544610 EMP1P54849 157 aa4.57□□□□□ -1.68
CDCA3-209ENST00000544610 UBE2D3P61077 147 aa4.57□□□□□ -1.68
CDCA3-209ENST00000544610 SSTP61278 116 aa4.57□□□□□ -1.68
CDCA3-209ENST00000544610 PKIAP61925 76 aa4.57□□□□□ -1.68
CDCA3-209ENST00000544610 UBE2D2P62837 147 aa4.57□□□□□ -1.68
CDCA3-209ENST00000544610 LAGE3Q14657 143 aa4.57□□□□□ -1.68
CDCA3-209ENST00000544610 MRPL23Q16540 153 aaKnown RBP4.57□□□□□ -1.68
CDCA3-209ENST00000544610 NIT1Q86X76 327 aa4.57□□□□□ -1.68
CDCA3-209ENST00000544610 C15orf53Q8NAA6 179 aa4.57□□□□□ -1.68
CDCA3-209ENST00000544610 NEXN-AS1Q8NBZ9 246 aa4.57□□□□□ -1.68
CDCA3-209ENST00000544610 HERC1Q15751 4861 aa4.56□□□□□ -1.68
CDCA3-209ENST00000544610 TRAV26-2A0A0B4J265 109 aa4.56□□□□□ -1.68
CDCA3-209ENST00000544610 PRYO14603 147 aa4.56□□□□□ -1.68
CDCA3-209ENST00000544610 SERF1AO75920 110 aa4.56□□□□□ -1.68
CDCA3-209ENST00000544610 HBDP02042 147 aa4.56□□□□□ -1.68
CDCA3-209ENST00000544610 S100A2P29034 98 aa4.56□□□□□ -1.68
CDCA3-209ENST00000544610 FCER1GP30273 86 aa4.56□□□□□ -1.68
CDCA3-209ENST00000544610 IFI27P40305 119 aaPredicted RBP4.56□□□□□ -1.68
CDCA3-209ENST00000544610 NDUFA6P56556 154 aa4.56□□□□□ -1.68
CDCA3-209ENST00000544610 COTL1Q14019 142 aa4.56□□□□□ -1.68
CDCA3-209ENST00000544610 PAPPA-AS1Q5QFB9 102 aa4.56□□□□□ -1.68
CDCA3-209ENST00000544610 Q6ZSN1 163 aa4.56□□□□□ -1.68
CDCA3-209ENST00000544610 UBE2DNLQ8IWF7 75 aa4.56□□□□□ -1.68
CDCA3-209ENST00000544610 HIST3H2BBQ8N257 126 aa4.56□□□□□ -1.68
CDCA3-209ENST00000544610 TIMM21Q9BVV7 248 aa4.56□□□□□ -1.68
CDCA3-209ENST00000544610 HSPB8Q9UJY1 196 aa4.56□□□□□ -1.68
CDCA3-209ENST00000544610 PYGO1Q9Y3Y4 419 aa4.56□□□□□ -1.68
CDCA3-209ENST00000544610 CSDC2Q9Y534 153 aaKnown RBP4.56□□□□□ -1.68
CDCA3-209ENST00000544610 SMKR1H3BMG3 65 aa4.55□□□□□ -1.68
CDCA3-209ENST00000544610 ATP5LO75964 103 aa4.55□□□□□ -1.68
CDCA3-209ENST00000544610 SNRPEP62304 92 aaKnown RBP4.55□□□□□ -1.68
CDCA3-209ENST00000544610 IQCJQ1A5X6 159 aa4.55□□□□□ -1.68
CDCA3-209ENST00000544610 SPATA12Q7Z6I5 190 aa4.55□□□□□ -1.68
CDCA3-209ENST00000544610 RPL39LQ96EH5 51 aaKnown RBP4.55□□□□□ -1.68
CDCA3-209ENST00000544610 URB1-AS1Q96HZ7 61 aa4.55□□□□□ -1.68
CDCA3-209ENST00000544610 TIMM17AQ99595 171 aa4.55□□□□□ -1.68
CDCA3-209ENST00000544610 CDK2AP2O75956 126 aa4.54□□□□□ -1.68
CDCA3-209ENST00000544610 GAS8-AS1O95177 125 aa4.54□□□□□ -1.68
CDCA3-209ENST00000544610 TSHBP01222 138 aa4.54□□□□□ -1.68
CDCA3-209ENST00000544610 ZNF25P17030 456 aaPredicted RBP4.54□□□□□ -1.68
CDCA3-209ENST00000544610 AMTP48728 403 aa4.54□□□□□ -1.68
CDCA3-209ENST00000544610 PDZD11Q5EBL8 140 aa4.54□□□□□ -1.68
CDCA3-209ENST00000544610 C1orf134Q5TEV5 83 aa4.54□□□□□ -1.68
CDCA3-209ENST00000544610 RNASEKQ6P5S7 137 aaKnown RBP4.54□□□□□ -1.68
CDCA3-209ENST00000544610 NEGR1Q7Z3B1 354 aa4.54□□□□□ -1.68
CDCA3-209ENST00000544610 ERASQ7Z444 233 aa4.54□□□□□ -1.68
CDCA3-209ENST00000544610 MRPL52Q86TS9 123 aaKnown RBP4.54□□□□□ -1.68
CDCA3-209ENST00000544610 C20orf203Q8NBC4 194 aa4.54□□□□□ -1.68
CDCA3-209ENST00000544610 ATP6V0E2Q8NHE4 81 aa4.54□□□□□ -1.68
CDCA3-209ENST00000544610 ZNRF2Q8NHG8 242 aa4.54□□□□□ -1.68
CDCA3-209ENST00000544610 TOMM6Q96B49 74 aa4.54□□□□□ -1.68
CDCA3-209ENST00000544610 TMEM141Q96I45 108 aa4.54□□□□□ -1.68
CDCA3-209ENST00000544610 VSIG2Q96IQ7 327 aa4.54□□□□□ -1.68
CDCA3-209ENST00000544610 HIST1H2BLQ99880 126 aa4.54□□□□□ -1.68
CDCA3-209ENST00000544610 CHCHD7Q9BUK0 85 aa4.54□□□□□ -1.68
CDCA3-209ENST00000544610 SPANXA1Q9NS26 97 aa4.54□□□□□ -1.68
CDCA3-209ENST00000544610 CYSLTR1Q9Y271 337 aa4.54□□□□□ -1.68
CDCA3-209ENST00000544610 ICOSQ9Y6W8 199 aa4.54□□□□□ -1.68
CDCA3-209ENST00000544610 TRBV25-1A0A075B6N4 114 aa4.53□□□□□ -1.68
CDCA3-209ENST00000544610 A0A096LNJ9 63 aa4.53□□□□□ -1.68
CDCA3-209ENST00000544610 TRBV6-8A0A0A6YYG3 113 aa4.53□□□□□ -1.68
CDCA3-209ENST00000544610 IGHV3-73A0A0B4J1V6 119 aa4.53□□□□□ -1.68
CDCA3-209ENST00000544610 IGHV1-24A0A0C4DH33 117 aa4.53□□□□□ -1.68
CDCA3-209ENST00000544610 LOC389332A0A1B0GUA5 103 aa4.53□□□□□ -1.68
CDCA3-209ENST00000544610 A0A1B0GUV1 79 aa4.53□□□□□ -1.68
CDCA3-209ENST00000544610 F5H768 121 aa4.53□□□□□ -1.68
CDCA3-209ENST00000544610 K7EP13 123 aa4.53□□□□□ -1.68
CDCA3-209ENST00000544610 LEPROTL1O95214 131 aa4.53□□□□□ -1.68
CDCA3-209ENST00000544610 NUDT3O95989 172 aa4.53□□□□□ -1.68
CDCA3-209ENST00000544610 MRPS36P82909 103 aaKnown RBP4.53□□□□□ -1.68
CDCA3-209ENST00000544610 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
CDCA3-209ENST00000544610 IGIPA6NJ69 53 aa4.52□□□□□ -1.69
CDCA3-209ENST00000544610 C16orf90A8MZG2 172 aa4.52□□□□□ -1.69
CDCA3-209ENST00000544610 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.52□□□□□ -1.69
CDCA3-209ENST00000544610 CCL25O15444 150 aa4.52□□□□□ -1.69
CDCA3-209ENST00000544610 NUPR1O60356 82 aa4.52□□□□□ -1.69
CDCA3-209ENST00000544610 HTN3P15516 51 aa4.52□□□□□ -1.69
CDCA3-209ENST00000544610 KRTAP19-4Q3LI73 84 aa4.52□□□□□ -1.69
CDCA3-209ENST00000544610 LELP1Q5T871 98 aa4.52□□□□□ -1.69
CDCA3-209ENST00000544610 C2orf66Q6UXQ4 117 aa4.52□□□□□ -1.69
CDCA3-209ENST00000544610 TMEM243Q9BU79 118 aa4.52□□□□□ -1.69
CDCA3-209ENST00000544610 A0A096LPF7 62 aa4.51□□□□□ -1.69
CDCA3-209ENST00000544610 TRAV12-1A0A0B4J245 112 aa4.51□□□□□ -1.69
CDCA3-209ENST00000544610 GAGE12JA6NER3 117 aa4.51□□□□□ -1.69
CDCA3-209ENST00000544610 IFITM10A6NMD0 228 aa4.51□□□□□ -1.69
CDCA3-209ENST00000544610 GAGE1Q13065 139 aa4.51□□□□□ -1.69
CDCA3-209ENST00000544610 GAGE4Q13068 117 aa4.51□□□□□ -1.69
CDCA3-209ENST00000544610 GAGE5Q13069 117 aa4.51□□□□□ -1.69
CDCA3-209ENST00000544610 MAPKAPK5-AS1Q8N8E1 139 aa4.51□□□□□ -1.69
CDCA3-209ENST00000544610 IFI27L1Q96BM0 104 aa4.51□□□□□ -1.69
CDCA3-209ENST00000544610 MAP1LC3CQ9BXW4 147 aa4.51□□□□□ -1.69
CDCA3-209ENST00000544610 NBDYA0A0U1RRE5 68 aa4.5□□□□□ -1.69
CDCA3-209ENST00000544610 LOC105371267A0A1B0GV96 52 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms