RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 BLOC1S1P78537 153 aa7.6□□□□□ -1.19
GABPB1-206ENST00000543881 TWIST1Q15672 202 aa7.6□□□□□ -1.19
GABPB1-206ENST00000543881 SDIM1Q6ZPB5 146 aa7.6□□□□□ -1.19
GABPB1-206ENST00000543881 GTSF1Q8WW33 167 aa7.6□□□□□ -1.19
GABPB1-206ENST00000543881 LRP2P98164 4655 aa7.59□□□□□ -1.19
GABPB1-206ENST00000543881 TRAV8-4A0A0B4J246 113 aa7.59□□□□□ -1.19
GABPB1-206ENST00000543881 SLPIP03973 132 aa7.59□□□□□ -1.19
GABPB1-206ENST00000543881 TAGLN2P37802 199 aaKnown RBP7.58□□□□□ -1.2
GABPB1-206ENST00000543881 AMTP48728 403 aa7.58□□□□□ -1.2
GABPB1-206ENST00000543881 RPL39LQ96EH5 51 aaKnown RBP7.58□□□□□ -1.2
GABPB1-206ENST00000543881 hDV102S1A0JD36 115 aa7.57□□□□□ -1.2
GABPB1-206ENST00000543881 CNBPP62633 177 aaKnown RBP7.57□□□□□ -1.2
GABPB1-206ENST00000543881 UBE2L6O14933 153 aa7.56□□□□□ -1.2
GABPB1-206ENST00000543881 RAB5AP20339 215 aa7.56□□□□□ -1.2
GABPB1-206ENST00000543881 Q6ZRU5 148 aa7.56□□□□□ -1.2
GABPB1-206ENST00000543881 LYPD6BQ8NI32 183 aa7.56□□□□□ -1.2
GABPB1-206ENST00000543881 TMEM250H0YL14 139 aa7.55□□□□□ -1.2
GABPB1-206ENST00000543881 CIRBPQ14011 172 aaKnown RBP7.55□□□□□ -1.2
GABPB1-206ENST00000543881 IGKV3OR2-268A0A0C4DH90 116 aa7.55□□□□□ -1.2
GABPB1-206ENST00000543881 GAGE12HA6NDE8 117 aa7.55□□□□□ -1.2
GABPB1-206ENST00000543881 GAS8-AS1O95177 125 aa7.55□□□□□ -1.2
GABPB1-206ENST00000543881 FAM231DQ6ZW35 169 aa7.55□□□□□ -1.2
GABPB1-206ENST00000543881 C15orf56Q8N910 161 aa7.55□□□□□ -1.2
GABPB1-206ENST00000543881 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.54□□□□□ -1.2
GABPB1-206ENST00000543881 IGKV2-29A2NJV5 120 aaPredicted RBP7.54□□□□□ -1.2
GABPB1-206ENST00000543881 CHTF8P0CG12 524 aa7.54□□□□□ -1.2
GABPB1-206ENST00000543881 RHEBQ15382 184 aa7.54□□□□□ -1.2
GABPB1-206ENST00000543881 CFAP161Q6P656 301 aa7.54□□□□□ -1.2
GABPB1-206ENST00000543881 TNXBP22105 4242 aa7.53□□□□□ -1.2
GABPB1-206ENST00000543881 IGHV3-64A0A075B6Q5 118 aa7.53□□□□□ -1.2
GABPB1-206ENST00000543881 FAM231BA6NCW3 169 aa7.53□□□□□ -1.2
GABPB1-206ENST00000543881 SDHAF1A6NFY7 115 aa7.53□□□□□ -1.2
GABPB1-206ENST00000543881 IFITM10A6NMD0 228 aa7.53□□□□□ -1.2
GABPB1-206ENST00000543881 A8MWL6 223 aa7.53□□□□□ -1.2
GABPB1-206ENST00000543881 M0R143 59 aa7.53□□□□□ -1.2
GABPB1-206ENST00000543881 NCR2O95944 276 aa7.53□□□□□ -1.2
GABPB1-206ENST00000543881 CEBPGP53567 150 aa7.53□□□□□ -1.2
GABPB1-206ENST00000543881 YPEL4Q96NS1 127 aa7.53□□□□□ -1.2
GABPB1-206ENST00000543881 PPBPP02775 128 aa7.52□□□□□ -1.21
GABPB1-206ENST00000543881 JOSD1Q15040 202 aaPredicted RBP7.52□□□□□ -1.21
GABPB1-206ENST00000543881 SMIM15Q7Z3B0 74 aa7.52□□□□□ -1.21
GABPB1-206ENST00000543881 AP5S1Q9NUS5 200 aa7.52□□□□□ -1.21
GABPB1-206ENST00000543881 A0A087WYN8 130 aa7.51□□□□□ -1.21
GABPB1-206ENST00000543881 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.51□□□□□ -1.21
GABPB1-206ENST00000543881 TRBV6-5A0A0K0K1A5 114 aa7.51□□□□□ -1.21
GABPB1-206ENST00000543881 APCSP02743 223 aa7.51□□□□□ -1.21
GABPB1-206ENST00000543881 FGF6P10767 208 aa7.51□□□□□ -1.21
GABPB1-206ENST00000543881 ZNF25P17030 456 aaPredicted RBP7.51□□□□□ -1.21
GABPB1-206ENST00000543881 HIGD2BQ4VC39 106 aa7.51□□□□□ -1.21
GABPB1-206ENST00000543881 CT83Q5H943 113 aa7.51□□□□□ -1.21
GABPB1-206ENST00000543881 AMMECR1LQ6DCA0 310 aa7.51□□□□□ -1.21
GABPB1-206ENST00000543881 RNASEKQ6P5S7 137 aaKnown RBP7.51□□□□□ -1.21
GABPB1-206ENST00000543881 SPACA4Q8TDM5 124 aa7.51□□□□□ -1.21
GABPB1-206ENST00000543881 CHCHD10Q8WYQ3 142 aaPredicted RBP7.51□□□□□ -1.21
GABPB1-206ENST00000543881 H7C423 109 aa7.5□□□□□ -1.21
GABPB1-206ENST00000543881 G0S2P27469 103 aa7.5□□□□□ -1.21
GABPB1-206ENST00000543881 LINC01551Q86U37 167 aa7.5□□□□□ -1.21
GABPB1-206ENST00000543881 HIST3H2BBQ8N257 126 aa7.5□□□□□ -1.21
GABPB1-206ENST00000543881 RNF185Q96GF1 192 aa7.5□□□□□ -1.21
GABPB1-206ENST00000543881 SMIM7Q9BQ49 75 aa7.5□□□□□ -1.21
GABPB1-206ENST00000543881 HIGD1CA8MV81 97 aa7.49□□□□□ -1.21
GABPB1-206ENST00000543881 I3L3M4 83 aa7.49□□□□□ -1.21
GABPB1-206ENST00000543881 TSHBP01222 138 aa7.49□□□□□ -1.21
GABPB1-206ENST00000543881 ESDP10768 282 aa7.49□□□□□ -1.21
GABPB1-206ENST00000543881 PMCHP20382 165 aa7.49□□□□□ -1.21
GABPB1-206ENST00000543881 RPS10P46783 165 aaKnown RBP7.49□□□□□ -1.21
GABPB1-206ENST00000543881 FOXI1Q12951 378 aa7.49□□□□□ -1.21
GABPB1-206ENST00000543881 TSKUQ8WUA8 353 aa7.49□□□□□ -1.21
GABPB1-206ENST00000543881 EIF5A2Q9GZV4 153 aaKnown RBP7.49□□□□□ -1.21
GABPB1-206ENST00000543881 SMDT1Q9H4I9 107 aa7.49□□□□□ -1.21
GABPB1-206ENST00000543881 SRP19P09132 144 aaKnown RBP7.49□□□□□ -1.21
GABPB1-206ENST00000543881 COX6A2Q02221 97 aa7.49□□□□□ -1.21
GABPB1-206ENST00000543881 MAJINQ3KP22 176 aa7.49□□□□□ -1.21
GABPB1-206ENST00000543881 OR5A1Q8NGJ0 315 aa7.49□□□□□ -1.21
GABPB1-206ENST00000543881 OR10D4PQ8NGN7 298 aa7.49□□□□□ -1.21
GABPB1-206ENST00000543881 PRSS3P2Q8NHM4 247 aa7.49□□□□□ -1.21
GABPB1-206ENST00000543881 DPH3Q96FX2 82 aa7.49□□□□□ -1.21
GABPB1-206ENST00000543881 TMEM191AQ9H0A3 160 aa7.49□□□□□ -1.21
GABPB1-206ENST00000543881 TMEM242Q9NWH2 141 aa7.49□□□□□ -1.21
GABPB1-206ENST00000543881 GVQW2A0A096LPI5 108 aaPredicted RBP7.48□□□□□ -1.21
GABPB1-206ENST00000543881 A0A1B0GUT8 65 aa7.48□□□□□ -1.21
GABPB1-206ENST00000543881 PPP1R2P9O14990 202 aa7.48□□□□□ -1.21
GABPB1-206ENST00000543881 POLR2KP53803 58 aaKnown RBP7.48□□□□□ -1.21
GABPB1-206ENST00000543881 AMN1Q8IY45 258 aa7.48□□□□□ -1.21
GABPB1-206ENST00000543881 SNHG12Q9BXW3 62 aa7.48□□□□□ -1.21
GABPB1-206ENST00000543881 ST20Q9HBF5 79 aa7.48□□□□□ -1.21
GABPB1-206ENST00000543881 OSTCQ9NRP0 149 aa7.48□□□□□ -1.21
GABPB1-206ENST00000543881 PLAC8Q9NZF1 115 aa7.48□□□□□ -1.21
GABPB1-206ENST00000543881 LINC00959A0A1B0GUT2 108 aa7.47□□□□□ -1.21
GABPB1-206ENST00000543881 C7orf77A4D0Y5 90 aa7.47□□□□□ -1.21
GABPB1-206ENST00000543881 ZNF727A8MUV8 499 aa7.47□□□□□ -1.21
GABPB1-206ENST00000543881 XCL1P47992 114 aa7.47□□□□□ -1.21
GABPB1-206ENST00000543881 BORCS7Q96B45 105 aa7.47□□□□□ -1.21
GABPB1-206ENST00000543881 V9GYV3 84 aa7.47□□□□□ -1.21
GABPB1-206ENST00000543881 TRBV27A0A0K0K1C4 114 aa7.46□□□□□ -1.22
GABPB1-206ENST00000543881 SMKR1H3BMG3 65 aa7.46□□□□□ -1.22
GABPB1-206ENST00000543881 CCL25O15444 150 aa7.46□□□□□ -1.22
GABPB1-206ENST00000543881 ODF1Q14990 250 aa7.46□□□□□ -1.22
GABPB1-206ENST00000543881 COA6Q5JTJ3 125 aaKnown RBP7.46□□□□□ -1.22
GABPB1-206ENST00000543881 LINC00526Q96FQ7 95 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms