RNA–Protein interactions for RNA: ENST00000543042.5

CLPB-212, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-212ENST00000543042 APOC4P55056 127 aa12.66□□□□□ -0.38
CLPB-212ENST00000543042 LINC00612Q8N6U2 182 aa12.66□□□□□ -0.38
CLPB-212ENST00000543042 TMEM223A0PJW6 202 aa12.65□□□□□ -0.38
CLPB-212ENST00000543042 SMIM9A6NGZ8 99 aa12.65□□□□□ -0.38
CLPB-212ENST00000543042 IGHV4-28A0A0C4DH34 117 aa12.65□□□□□ -0.38
CLPB-212ENST00000543042 HERVK_113P61574 105 aa12.64□□□□□ -0.39
CLPB-212ENST00000543042 MRPS36P82909 103 aaKnown RBP12.64□□□□□ -0.39
CLPB-212ENST00000543042 DGAT2L7PQ6IED9 249 aa12.64□□□□□ -0.39
CLPB-212ENST00000543042 SBSPONQ8IVN8 264 aa12.64□□□□□ -0.39
CLPB-212ENST00000543042 SEC11AP67812 179 aa12.63□□□□□ -0.39
CLPB-212ENST00000543042 TRAV8-3A0A0A6YYJ7 113 aa12.62□□□□□ -0.39
CLPB-212ENST00000543042 NPSP0C0P6 89 aa12.62□□□□□ -0.39
CLPB-212ENST00000543042 CELA1Q9UNI1 258 aa12.62□□□□□ -0.39
CLPB-212ENST00000543042 J3QQQ9 107 aa12.62□□□□□ -0.39
CLPB-212ENST00000543042 CIDEAO60543 219 aa12.62□□□□□ -0.39
CLPB-212ENST00000543042 CRYBA4P53673 196 aa12.62□□□□□ -0.39
CLPB-212ENST00000543042 NAA38Q9BRA0 125 aaKnown RBP12.62□□□□□ -0.39
CLPB-212ENST00000543042 A8MZ25 164 aa12.61□□□□□ -0.39
CLPB-212ENST00000543042 SCGB1D4Q6XE38 83 aa12.61□□□□□ -0.39
CLPB-212ENST00000543042 CEND1Q8N111 149 aa12.61□□□□□ -0.39
CLPB-212ENST00000543042 RAB37Q96AX2 223 aa12.61□□□□□ -0.39
CLPB-212ENST00000543042 HIST1H4GQ99525 98 aa12.61□□□□□ -0.39
CLPB-212ENST00000543042 NOTCH1P46531 2555 aa12.61□□□□□ -0.39
CLPB-212ENST00000543042 UBE2D1P51668 147 aa12.61□□□□□ -0.39
CLPB-212ENST00000543042 COX6A2Q02221 97 aa12.61□□□□□ -0.39
CLPB-212ENST00000543042 Q8NAQ8 132 aa12.61□□□□□ -0.39
CLPB-212ENST00000543042 A0A096LPF7 62 aa12.6□□□□□ -0.39
CLPB-212ENST00000543042 K7ERJ3 54 aa12.6□□□□□ -0.39
CLPB-212ENST00000543042 LINC00469Q8N7U9 141 aa12.6□□□□□ -0.39
CLPB-212ENST00000543042 GYPEP15421 78 aa12.59□□□□□ -0.39
CLPB-212ENST00000543042 TIMM21Q9BVV7 248 aa12.59□□□□□ -0.39
CLPB-212ENST00000543042 GTSF1LQ9H1H1 148 aa12.59□□□□□ -0.39
CLPB-212ENST00000543042 TINCRA0A1B0GVN0 87 aa12.59□□□□□ -0.39
CLPB-212ENST00000543042 PTTG1IPP53801 180 aa12.59□□□□□ -0.39
CLPB-212ENST00000543042 RNF183Q96D59 192 aa12.59□□□□□ -0.39
CLPB-212ENST00000543042 TMEM243Q9BU79 118 aa12.59□□□□□ -0.39
CLPB-212ENST00000543042 TM2D2Q9BX73 214 aa12.59□□□□□ -0.39
CLPB-212ENST00000543042 A6NDN8 102 aa12.58□□□□□ -0.4
CLPB-212ENST00000543042 LEPROTO15243 131 aa12.58□□□□□ -0.4
CLPB-212ENST00000543042 SPINK8P0C7L1 97 aa12.58□□□□□ -0.4
CLPB-212ENST00000543042 GAGE6Q13070 117 aa12.58□□□□□ -0.4
CLPB-212ENST00000543042 SHISA2Q6UWI4 295 aa12.58□□□□□ -0.4
CLPB-212ENST00000543042 TRAV13-1A0A0B4J241 112 aa12.58□□□□□ -0.4
CLPB-212ENST00000543042 A0A0J9YY99 117 aa12.58□□□□□ -0.4
CLPB-212ENST00000543042 IGHV3-30-3P0DP02 117 aa12.58□□□□□ -0.4
CLPB-212ENST00000543042 LGALS3P17931 250 aaKnown RBP12.58□□□□□ -0.4
CLPB-212ENST00000543042 CDC42SE2Q9NRR3 84 aa12.58□□□□□ -0.4
CLPB-212ENST00000543042 CDKN2A-AS1Q9UH64 79 aa12.58□□□□□ -0.4
CLPB-212ENST00000543042 LYRM9A8MSI8 78 aa12.57□□□□□ -0.4
CLPB-212ENST00000543042 UBE2L6O14933 153 aa12.57□□□□□ -0.4
CLPB-212ENST00000543042 AMMECR1LQ6DCA0 310 aa12.57□□□□□ -0.4
CLPB-212ENST00000543042 TRBV6-8A0A0A6YYG3 113 aa12.56□□□□□ -0.4
CLPB-212ENST00000543042 RETNQ9HD89 108 aa12.56□□□□□ -0.4
CLPB-212ENST00000543042 NHP2Q9NX24 153 aaKnown RBP12.56□□□□□ -0.4
CLPB-212ENST00000543042 LINC00242Q5T6M2 205 aa12.56□□□□□ -0.4
CLPB-212ENST00000543042 OR5A1Q8NGJ0 315 aa12.56□□□□□ -0.4
CLPB-212ENST00000543042 GEMIN7Q9H840 131 aaKnown RBP12.56□□□□□ -0.4
CLPB-212ENST00000543042 G3V4G9 280 aa12.55□□□□□ -0.4
CLPB-212ENST00000543042 PRO0255Q9UI72 69 aa12.55□□□□□ -0.4
CLPB-212ENST00000543042 CSDC2Q9Y534 153 aaKnown RBP12.55□□□□□ -0.4
CLPB-212ENST00000543042 IGLV4-60A0A075B6I1 120 aa12.55□□□□□ -0.4
CLPB-212ENST00000543042 H3BRM9 83 aa12.55□□□□□ -0.4
CLPB-212ENST00000543042 MIFP14174 115 aa12.55□□□□□ -0.4
CLPB-212ENST00000543042 DAD1P61803 113 aa12.55□□□□□ -0.4
CLPB-212ENST00000543042 VAMP3Q15836 100 aa12.55□□□□□ -0.4
CLPB-212ENST00000543042 VSIG2Q96IQ7 327 aa12.55□□□□□ -0.4
CLPB-212ENST00000543042 CCL25O15444 150 aa12.54□□□□□ -0.4
CLPB-212ENST00000543042 SRSF9Q13242 221 aaKnown RBP eCLIP12.54□□□□□ -0.4
CLPB-212ENST00000543042 TAL2Q16559 108 aa12.54□□□□□ -0.4
CLPB-212ENST00000543042 ATP6V0E2Q8NHE4 81 aa12.54□□□□□ -0.4
CLPB-212ENST00000543042 CHCHD5Q9BSY4 110 aa12.54□□□□□ -0.4
CLPB-212ENST00000543042 H3BUT2 72 aa12.53□□□□□ -0.4
CLPB-212ENST00000543042 PAX4O43316 350 aa12.53□□□□□ -0.4
CLPB-212ENST00000543042 EGFEM1PQ0D2K5 195 aa12.53□□□□□ -0.4
CLPB-212ENST00000543042 C10orf126Q8N4M7 172 aa12.53□□□□□ -0.4
CLPB-212ENST00000543042 TENM3Q9P273 2699 aa12.53□□□□□ -0.4
CLPB-212ENST00000543042 IGHV1-58A0A0C4DH39 117 aa12.53□□□□□ -0.4
CLPB-212ENST00000543042 IGKV3OR2-268A0A0C4DH90 116 aa12.53□□□□□ -0.4
CLPB-212ENST00000543042 SMIM13P0DJ93 91 aa12.53□□□□□ -0.4
CLPB-212ENST00000543042 DNAH3Q8TD57 4116 aa12.52□□□□□ -0.4
CLPB-212ENST00000543042 NBEAL1Q6ZS30 2694 aa12.52□□□□□ -0.41
CLPB-212ENST00000543042 C9orf118A6NHY6 69 aa12.52□□□□□ -0.41
CLPB-212ENST00000543042 HTN3P15516 51 aa12.52□□□□□ -0.41
CLPB-212ENST00000543042 TIRAPP58753 221 aa12.51□□□□□ -0.41
CLPB-212ENST00000543042 TMEM101Q96IK0 257 aa12.51□□□□□ -0.41
CLPB-212ENST00000543042 IGLV5-45A0A087WSX0 123 aa12.5□□□□□ -0.41
CLPB-212ENST00000543042 TRAV26-1A0A087WT03 109 aa12.5□□□□□ -0.41
CLPB-212ENST00000543042 SPART-AS1P0CW21 52 aa12.5□□□□□ -0.41
CLPB-212ENST00000543042 UBE2V1Q13404 147 aa12.5□□□□□ -0.41
CLPB-212ENST00000543042 C12orf74Q32Q52 190 aa12.5□□□□□ -0.41
CLPB-212ENST00000543042 F5H768 121 aa12.49□□□□□ -0.41
CLPB-212ENST00000543042 PRB2P02812 416 aaPredicted RBP12.49□□□□□ -0.41
CLPB-212ENST00000543042 A0A0J9YXY3 114 aa12.48□□□□□ -0.41
CLPB-212ENST00000543042 ATP5G1P05496 136 aa12.48□□□□□ -0.41
CLPB-212ENST00000543042 H7C423 109 aa12.47□□□□□ -0.41
CLPB-212ENST00000543042 IGHV3-30P01768 117 aa12.47□□□□□ -0.41
CLPB-212ENST00000543042 IGHV3-30-5P0DP03 117 aa12.47□□□□□ -0.41
CLPB-212ENST00000543042 HERVK_113P63121 156 aa12.47□□□□□ -0.41
CLPB-212ENST00000543042 NDUFA12Q9UI09 145 aa12.47□□□□□ -0.41
CLPB-212ENST00000543042 TMEM262E9PQX1 116 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms