RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 WFDC9Q8NEX5 89 aa3.66□□□□□ -1.82
SNHG1-218ENST00000541615 BBC3Q96PG8 261 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-218ENST00000541615 CDC42SE2Q9NRR3 84 aa3.66□□□□□ -1.82
SNHG1-218ENST00000541615 INTS1Q8N201 2190 aaKnown RBP3.65□□□□□ -1.82
SNHG1-218ENST00000541615 MED12Q93074 2177 aa3.65□□□□□ -1.82
SNHG1-218ENST00000541615 TET2Q6N021 2002 aaPredicted RBP3.65□□□□□ -1.82
SNHG1-218ENST00000541615 A0A087WYN8 130 aa3.65□□□□□ -1.83
SNHG1-218ENST00000541615 TRBV10-1A0A0K0K1A3 114 aa3.65□□□□□ -1.83
SNHG1-218ENST00000541615 PRR3P79522 188 aaKnown RBP3.65□□□□□ -1.83
SNHG1-218ENST00000541615 NDPQ00604 133 aa3.65□□□□□ -1.83
SNHG1-218ENST00000541615 C6orf99Q4VX62 202 aa3.65□□□□□ -1.83
SNHG1-218ENST00000541615 IGFL4Q6B9Z1 124 aa3.65□□□□□ -1.83
SNHG1-218ENST00000541615 HCP5Q6MZN7 132 aa3.65□□□□□ -1.83
SNHG1-218ENST00000541615 Q6ZSV7 163 aa3.65□□□□□ -1.83
SNHG1-218ENST00000541615 LINC00337Q8N6G1 96 aa3.65□□□□□ -1.83
SNHG1-218ENST00000541615 Q8TAT8 98 aa3.65□□□□□ -1.83
SNHG1-218ENST00000541615 DSCAMO60469 2012 aa3.65□□□□□ -1.83
SNHG1-218ENST00000541615 IGHV6-1A0A0B4J1U7 121 aa3.64□□□□□ -1.83
SNHG1-218ENST00000541615 IGKV2-29A2NJV5 120 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-218ENST00000541615 H3BPC8 53 aa3.64□□□□□ -1.83
SNHG1-218ENST00000541615 IGLV2-23P01705 113 aa3.64□□□□□ -1.83
SNHG1-218ENST00000541615 SUMO4Q6EEV6 95 aa3.64□□□□□ -1.83
SNHG1-218ENST00000541615 Q8N814 137 aa3.64□□□□□ -1.83
SNHG1-218ENST00000541615 Q8N9P0 234 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-218ENST00000541615 SMIM11BQ8TCY0 68 aa3.64□□□□□ -1.83
SNHG1-218ENST00000541615 PRO3102Q9H379 93 aa3.64□□□□□ -1.83
SNHG1-218ENST00000541615 SND1-IT1Q9HBX3 110 aa3.64□□□□□ -1.83
SNHG1-218ENST00000541615 CCL26Q9Y258 94 aa3.64□□□□□ -1.83
SNHG1-218ENST00000541615 PRRC2AP48634 2157 aaKnown RBP3.63□□□□□ -1.83
SNHG1-218ENST00000541615 F5H697 171 aa3.63□□□□□ -1.83
SNHG1-218ENST00000541615 LY6G6DO95868 133 aa3.63□□□□□ -1.83
SNHG1-218ENST00000541615 IGHV3-48P01763 117 aa3.63□□□□□ -1.83
SNHG1-218ENST00000541615 LINC00315P59091 139 aa3.63□□□□□ -1.83
SNHG1-218ENST00000541615 ESPL1Q14674 2120 aa3.63□□□□□ -1.83
SNHG1-218ENST00000541615 NTM-AS1Q6ZSK4 140 aa3.63□□□□□ -1.83
SNHG1-218ENST00000541615 LINC01356Q8N9X3 169 aa3.63□□□□□ -1.83
SNHG1-218ENST00000541615 C11orf21Q9P2W6 132 aa3.63□□□□□ -1.83
SNHG1-218ENST00000541615 UNC80Q8N2C7 3258 aa3.63□□□□□ -1.83
SNHG1-218ENST00000541615 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
SNHG1-218ENST00000541615 K7EIM0 57 aa3.62□□□□□ -1.83
SNHG1-218ENST00000541615 C11orf72Q8NBR9 251 aa3.62□□□□□ -1.83
SNHG1-218ENST00000541615 ZCCHC13Q8WW36 166 aaKnown RBP3.62□□□□□ -1.83
SNHG1-218ENST00000541615 B9D2Q9BPU9 175 aa3.62□□□□□ -1.83
SNHG1-218ENST00000541615 PRR15LQ9BU68 103 aa3.62□□□□□ -1.83
SNHG1-218ENST00000541615 FAM30AQ9NZY2 134 aa3.62□□□□□ -1.83
SNHG1-218ENST00000541615 KLK9Q9UKQ9 250 aa3.62□□□□□ -1.83
SNHG1-218ENST00000541615 KNTC1P50748 2209 aa3.61□□□□□ -1.83
SNHG1-218ENST00000541615 K7EQG2 157 aa3.61□□□□□ -1.83
SNHG1-218ENST00000541615 M0QY20 66 aa3.61□□□□□ -1.83
SNHG1-218ENST00000541615 CCL5P13501 91 aa3.61□□□□□ -1.83
SNHG1-218ENST00000541615 GYPEP15421 78 aa3.61□□□□□ -1.83
SNHG1-218ENST00000541615 B3GALT5-AS1P59052 145 aa3.61□□□□□ -1.83
SNHG1-218ENST00000541615 MOBPQ13875 183 aa3.61□□□□□ -1.83
SNHG1-218ENST00000541615 CXCL17Q6UXB2 119 aa3.61□□□□□ -1.83
SNHG1-218ENST00000541615 LINC00208Q96KT6 92 aa3.61□□□□□ -1.83
SNHG1-218ENST00000541615 RETNLBQ9BQ08 111 aa3.61□□□□□ -1.83
SNHG1-218ENST00000541615 LINC00467Q9BRT7 94 aa3.61□□□□□ -1.83
SNHG1-218ENST00000541615 HIGD2AQ9BW72 106 aa3.61□□□□□ -1.83
SNHG1-218ENST00000541615 ARRDC1-AS1Q9H2J1 176 aa3.61□□□□□ -1.83
SNHG1-218ENST00000541615 NCOR1O75376 2440 aa3.6□□□□□ -1.83
SNHG1-218ENST00000541615 IGHV3-49A0A0A0MS15 119 aa3.6□□□□□ -1.83
SNHG1-218ENST00000541615 IGHV1-3A0A0C4DH29 117 aa3.6□□□□□ -1.83
SNHG1-218ENST00000541615 IGHV3-38A0A0C4DH36 116 aa3.6□□□□□ -1.83
SNHG1-218ENST00000541615 IGHV4-31P0DP07 118 aa3.6□□□□□ -1.83
SNHG1-218ENST00000541615 C10orf55Q5SWW7 151 aa3.6□□□□□ -1.83
SNHG1-218ENST00000541615 C9orf129Q5T035 196 aaKnown RBP3.6□□□□□ -1.83
SNHG1-218ENST00000541615 XAGE1AQ9HD64 81 aa3.6□□□□□ -1.83
SNHG1-218ENST00000541615 FREM1Q5H8C1 2179 aa3.6□□□□□ -1.83
SNHG1-218ENST00000541615 RANBP2P49792 3224 aaKnown RBP3.6□□□□□ -1.83
SNHG1-218ENST00000541615 HTTP42858 3142 aa3.59□□□□□ -1.83
SNHG1-218ENST00000541615 ETDCA0A1B0GVM5 59 aa3.59□□□□□ -1.83
SNHG1-218ENST00000541615 TRBV6-4A0A1B0GX49 114 aa3.59□□□□□ -1.83
SNHG1-218ENST00000541615 IGHV4-38-2P0DP08 117 aa3.59□□□□□ -1.83
SNHG1-218ENST00000541615 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.59□□□□□ -1.83
SNHG1-218ENST00000541615 C18orf65Q6ZTR6 163 aa3.59□□□□□ -1.83
SNHG1-218ENST00000541615 LEAP2Q969E1 77 aa3.59□□□□□ -1.83
SNHG1-218ENST00000541615 BRCA2P51587 3418 aa3.58□□□□□ -1.84
SNHG1-218ENST00000541615 NOTCH4Q99466 2003 aa3.58□□□□□ -1.84
SNHG1-218ENST00000541615 IGLV3-9A0A075B6K5 115 aa3.58□□□□□ -1.84
SNHG1-218ENST00000541615 IGKV2-28A0A075B6P5 120 aa3.58□□□□□ -1.84
SNHG1-218ENST00000541615 IGHV3-73A0A0B4J1V6 119 aa3.58□□□□□ -1.84
SNHG1-218ENST00000541615 C10orf142B7Z368 130 aa3.58□□□□□ -1.84
SNHG1-218ENST00000541615 IGKV2D-28P01615 120 aa3.58□□□□□ -1.84
SNHG1-218ENST00000541615 RNASE3P12724 160 aaKnown RBP3.58□□□□□ -1.84
SNHG1-218ENST00000541615 MRGPRG-AS1Q2M3A8 158 aa3.58□□□□□ -1.84
SNHG1-218ENST00000541615 ZNRF1Q8ND25 227 aa3.58□□□□□ -1.84
SNHG1-218ENST00000541615 MUC7Q8TAX7 377 aa3.58□□□□□ -1.84
SNHG1-218ENST00000541615 KRTAP17-1Q9BYP8 105 aa3.58□□□□□ -1.84
SNHG1-218ENST00000541615 CDKN2A-AS1Q9UH64 79 aa3.58□□□□□ -1.84
SNHG1-218ENST00000541615 ZNF580Q9UK33 172 aa3.58□□□□□ -1.84
SNHG1-218ENST00000541615 ZNF706Q9Y5V0 76 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-218ENST00000541615 LINC01558Q9Y6Z2 57 aa3.58□□□□□ -1.84
SNHG1-218ENST00000541615 DSCAML1Q8TD84 2053 aa3.58□□□□□ -1.84
SNHG1-218ENST00000541615 DIDO1Q9BTC0 2240 aaKnown RBP3.58□□□□□ -1.84
SNHG1-218ENST00000541615 ZNF407Q9C0G0 2248 aa3.58□□□□□ -1.84
SNHG1-218ENST00000541615 DNAH12Q6ZR08 3092 aa3.57□□□□□ -1.84
SNHG1-218ENST00000541615 LAMA2P24043 3122 aaKnown RBP3.57□□□□□ -1.84
SNHG1-218ENST00000541615 IGLV11-55A0A075B6I3 123 aa3.57□□□□□ -1.84
SNHG1-218ENST00000541615 TRGV2A0A075B6R0 118 aa3.57□□□□□ -1.84
SNHG1-218ENST00000541615 IGHV3-21A0A0B4J1V1 117 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms