RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 SORL1Q92673 2214 aa11.56□□□□□ -0.56
HMGA2-210ENST00000541363 UNQ9165/PRO28630Q6UXU0 137 aa11.56□□□□□ -0.56
HMGA2-210ENST00000541363 ATG2AQ2TAZ0 1938 aa11.56□□□□□ -0.56
HMGA2-210ENST00000541363 DNAJC9-AS1A6NH13 148 aa11.55□□□□□ -0.56
HMGA2-210ENST00000541363 LINC00694P0DN24 101 aa11.55□□□□□ -0.56
HMGA2-210ENST00000541363 IGLV4-3A0A075B6K6 122 aa11.55□□□□□ -0.56
HMGA2-210ENST00000541363 COX17Q14061 63 aa11.54□□□□□ -0.56
HMGA2-210ENST00000541363 PTPRBP23467 1997 aa11.54□□□□□ -0.56
HMGA2-210ENST00000541363 CSDC2Q9Y534 153 aaKnown RBP11.54□□□□□ -0.56
HMGA2-210ENST00000541363 IGLV4-69A0A075B6H9 119 aa11.54□□□□□ -0.56
HMGA2-210ENST00000541363 CFAP126Q5VTH2 177 aa11.53□□□□□ -0.56
HMGA2-210ENST00000541363 TRAV7A0A075B6U4 112 aa11.53□□□□□ -0.56
HMGA2-210ENST00000541363 CCDC179H3BU77 68 aa11.53□□□□□ -0.56
HMGA2-210ENST00000541363 COL4A1P02462 1669 aa11.53□□□□□ -0.56
HMGA2-210ENST00000541363 A6NDX4 124 aa11.53□□□□□ -0.56
HMGA2-210ENST00000541363 RPL37AP8A6NKH3 93 aa11.52□□□□□ -0.56
HMGA2-210ENST00000541363 Q6ZQY7 126 aa11.52□□□□□ -0.56
HMGA2-210ENST00000541363 ZNF22P17026 224 aaPredicted RBP11.52□□□□□ -0.57
HMGA2-210ENST00000541363 Q6Q795 121 aa11.52□□□□□ -0.57
HMGA2-210ENST00000541363 RNF185Q96GF1 192 aa11.52□□□□□ -0.57
HMGA2-210ENST00000541363 TRAV10A0A0B4J240 114 aa11.51□□□□□ -0.57
HMGA2-210ENST00000541363 VPREB1P12018 145 aa11.51□□□□□ -0.57
HMGA2-210ENST00000541363 ATRXP46100 2492 aa11.51□□□□□ -0.57
HMGA2-210ENST00000541363 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.51□□□□□ -0.57
HMGA2-210ENST00000541363 PCNX3Q9H6A9 2034 aa11.5□□□□□ -0.57
HMGA2-210ENST00000541363 CIRBP-AS1Q8TBR5 109 aa11.5□□□□□ -0.57
HMGA2-210ENST00000541363 SMIM11BQ8TCY0 68 aa11.5□□□□□ -0.57
HMGA2-210ENST00000541363 SOSTDC1Q6X4U4 206 aa11.49□□□□□ -0.57
HMGA2-210ENST00000541363 LINC00208Q96KT6 92 aa11.49□□□□□ -0.57
HMGA2-210ENST00000541363 PLA2G2AP14555 144 aa11.49□□□□□ -0.57
HMGA2-210ENST00000541363 CD164L2Q6UWJ8 174 aa11.49□□□□□ -0.57
HMGA2-210ENST00000541363 Q6JHZ5 121 aa11.49□□□□□ -0.57
HMGA2-210ENST00000541363 NRGNQ92686 78 aa11.49□□□□□ -0.57
HMGA2-210ENST00000541363 CELA1Q9UNI1 258 aa11.49□□□□□ -0.57
HMGA2-210ENST00000541363 IGF1P05019 195 aa11.48□□□□□ -0.57
HMGA2-210ENST00000541363 SERTAD4-AS1Q5TG53 156 aa11.48□□□□□ -0.57
HMGA2-210ENST00000541363 IGLV2-18A0A075B6J9 118 aa11.48□□□□□ -0.57
HMGA2-210ENST00000541363 POM121L12Q8N7R1 296 aa11.48□□□□□ -0.57
HMGA2-210ENST00000541363 TRBV6-4A0A1B0GX49 114 aa11.48□□□□□ -0.57
HMGA2-210ENST00000541363 U3KQA8 63 aa11.48□□□□□ -0.57
HMGA2-210ENST00000541363 M0R2N4 97 aa11.47□□□□□ -0.57
HMGA2-210ENST00000541363 Q8N7P7 452 aa11.46□□□□□ -0.57
HMGA2-210ENST00000541363 LOC100131303A0A0U1RQF7 123 aa11.46□□□□□ -0.57
HMGA2-210ENST00000541363 M0QXV9 152 aa11.46□□□□□ -0.57
HMGA2-210ENST00000541363 LST1O00453 97 aa11.46□□□□□ -0.58
HMGA2-210ENST00000541363 PSPHP1O15172 72 aa11.46□□□□□ -0.58
HMGA2-210ENST00000541363 ZNF80P51504 273 aaPredicted RBP11.46□□□□□ -0.58
HMGA2-210ENST00000541363 DAZAP2Q15038 168 aaPredicted RBP11.46□□□□□ -0.58
HMGA2-210ENST00000541363 NRACQ8N912 160 aa11.46□□□□□ -0.58
HMGA2-210ENST00000541363 PYGO1Q9Y3Y4 419 aa11.46□□□□□ -0.58
HMGA2-210ENST00000541363 KRTAP27-1Q3LI81 207 aa11.46□□□□□ -0.58
HMGA2-210ENST00000541363 PLA2G1BP04054 148 aaKnown RBP11.46□□□□□ -0.58
HMGA2-210ENST00000541363 RPL28P46779 137 aaKnown RBP11.45□□□□□ -0.58
HMGA2-210ENST00000541363 PLA2G2CQ5R387 149 aa11.45□□□□□ -0.58
HMGA2-210ENST00000541363 TET2Q6N021 2002 aaPredicted RBP11.45□□□□□ -0.58
HMGA2-210ENST00000541363 E7EUB6 86 aa11.45□□□□□ -0.58
HMGA2-210ENST00000541363 ZNF73O43830 326 aaPredicted RBP11.45□□□□□ -0.58
HMGA2-210ENST00000541363 NANOS2P60321 138 aaKnown RBP11.45□□□□□ -0.58
HMGA2-210ENST00000541363 SPINK1P00995 79 aa11.44□□□□□ -0.58
HMGA2-210ENST00000541363 ZNF843Q8N446 348 aa11.44□□□□□ -0.58
HMGA2-210ENST00000541363 RETNLBQ9BQ08 111 aa11.44□□□□□ -0.58
HMGA2-210ENST00000541363 DEFB114Q30KQ6 69 aa11.44□□□□□ -0.58
HMGA2-210ENST00000541363 IGHV6-1A0A0B4J1U7 121 aa11.44□□□□□ -0.58
HMGA2-210ENST00000541363 LY6G6CO95867 125 aa11.43□□□□□ -0.58
HMGA2-210ENST00000541363 M0QY20 66 aa11.43□□□□□ -0.58
HMGA2-210ENST00000541363 FRMD6-AS1P0C7T7 363 aa11.43□□□□□ -0.58
HMGA2-210ENST00000541363 MAPKAPK5-AS1Q8N8E1 139 aa11.43□□□□□ -0.58
HMGA2-210ENST00000541363 Q8N976 141 aa11.43□□□□□ -0.58
HMGA2-210ENST00000541363 MUC7Q8TAX7 377 aa11.43□□□□□ -0.58
HMGA2-210ENST00000541363 CCDC140Q96MF4 163 aa11.43□□□□□ -0.58
HMGA2-210ENST00000541363 LELP1Q5T871 98 aa11.42□□□□□ -0.58
HMGA2-210ENST00000541363 BEAN1Q3B7T3 259 aa11.42□□□□□ -0.58
HMGA2-210ENST00000541363 COL4A6Q14031 1691 aa11.42□□□□□ -0.58
HMGA2-210ENST00000541363 TRBV7-7A0A0K0K1E9 115 aa11.42□□□□□ -0.58
HMGA2-210ENST00000541363 IGLV1-47P01700 117 aa11.42□□□□□ -0.58
HMGA2-210ENST00000541363 ADORA2A-AS1P86434 159 aa11.42□□□□□ -0.58
HMGA2-210ENST00000541363 PIP4P1Q86T03 277 aa11.41□□□□□ -0.58
HMGA2-210ENST00000541363 KPRPQ5T749 579 aaPredicted RBP11.41□□□□□ -0.58
HMGA2-210ENST00000541363 ZNF524Q96C55 264 aa11.41□□□□□ -0.58
HMGA2-210ENST00000541363 NOTCH4Q99466 2003 aa11.41□□□□□ -0.58
HMGA2-210ENST00000541363 K7EQG2 157 aa11.4□□□□□ -0.58
HMGA2-210ENST00000541363 CREBBPQ92793 2442 aa11.4□□□□□ -0.58
HMGA2-210ENST00000541363 LINC01547P58512 204 aaPredicted RBP11.4□□□□□ -0.58
HMGA2-210ENST00000541363 PLA2G2EQ9NZK7 142 aa11.4□□□□□ -0.58
HMGA2-210ENST00000541363 LTBP1Q14766 1721 aa11.4□□□□□ -0.58
HMGA2-210ENST00000541363 H0Y9P7 68 aa11.4□□□□□ -0.58
HMGA2-210ENST00000541363 TNFRSF13BO14836 293 aaPredicted RBP11.4□□□□□ -0.59
HMGA2-210ENST00000541363 CRYGAP11844 174 aa11.4□□□□□ -0.59
HMGA2-210ENST00000541363 REG3GQ6UW15 175 aa11.4□□□□□ -0.59
HMGA2-210ENST00000541363 BBC3Q96PG8 261 aaPredicted RBP11.4□□□□□ -0.59
HMGA2-210ENST00000541363 TP73-AS1Q9UF72 201 aa11.39□□□□□ -0.59
HMGA2-210ENST00000541363 RBX1P62877 108 aa11.38□□□□□ -0.59
HMGA2-210ENST00000541363 PCOTHQ58A44 107 aa11.38□□□□□ -0.59
HMGA2-210ENST00000541363 U3KQK5 164 aa11.38□□□□□ -0.59
HMGA2-210ENST00000541363 SHISA2Q6UWI4 295 aa11.38□□□□□ -0.59
HMGA2-210ENST00000541363 IGLV2-14P01704 120 aa11.38□□□□□ -0.59
HMGA2-210ENST00000541363 GDF5OSQ5U4N7 250 aa11.38□□□□□ -0.59
HMGA2-210ENST00000541363 Q6YL49 198 aa11.38□□□□□ -0.59
HMGA2-210ENST00000541363 NUPR2A6NF83 97 aa11.38□□□□□ -0.59
HMGA2-210ENST00000541363 C1orf137Q5JT78 98 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms