RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 A0A087WW49 117 aa10.53□□□□□ -0.72
SFSWAP-210ENST00000541286 LOC107984640A0A0U1RRK4 108 aa10.53□□□□□ -0.72
SFSWAP-210ENST00000541286 IGHV3-33P01772 117 aa10.53□□□□□ -0.72
SFSWAP-210ENST00000541286 ZNF22P17026 224 aaPredicted RBP10.53□□□□□ -0.72
SFSWAP-210ENST00000541286 PMVKQ15126 192 aa10.53□□□□□ -0.72
SFSWAP-210ENST00000541286 ZNF876PQ49A33 203 aa10.53□□□□□ -0.72
SFSWAP-210ENST00000541286 C2orf82Q6UX34 121 aa10.53□□□□□ -0.72
SFSWAP-210ENST00000541286 FAM110AQ9BQ89 295 aa10.53□□□□□ -0.72
SFSWAP-210ENST00000541286 A0A0U1RRA0 63 aa10.52□□□□□ -0.72
SFSWAP-210ENST00000541286 SLC25A29Q8N8R3 303 aa10.52□□□□□ -0.72
SFSWAP-210ENST00000541286 SNRPD3P62318 126 aaKnown RBP10.52□□□□□ -0.73
SFSWAP-210ENST00000541286 LINC01620Q4KN68 170 aa10.52□□□□□ -0.73
SFSWAP-210ENST00000541286 DAND5Q8N907 189 aa10.52□□□□□ -0.73
SFSWAP-210ENST00000541286 SPXQ9BT56 116 aa10.52□□□□□ -0.73
SFSWAP-210ENST00000541286 PPP1R17O96001 155 aa10.52□□□□□ -0.73
SFSWAP-210ENST00000541286 KLK5Q9Y337 293 aaPredicted RBP10.52□□□□□ -0.73
SFSWAP-210ENST00000541286 RS1O15537 224 aa10.51□□□□□ -0.73
SFSWAP-210ENST00000541286 P0DMU3 169 aa10.51□□□□□ -0.73
SFSWAP-210ENST00000541286 FAM231AP0DMU4 169 aa10.51□□□□□ -0.73
SFSWAP-210ENST00000541286 FAM231CP0DMU5 169 aa10.51□□□□□ -0.73
SFSWAP-210ENST00000541286 LINC00315P59091 139 aa10.51□□□□□ -0.73
SFSWAP-210ENST00000541286 TRIAP1O43715 76 aa10.5□□□□□ -0.73
SFSWAP-210ENST00000541286 CEMP1Q6PRD7 247 aaPredicted RBP10.5□□□□□ -0.73
SFSWAP-210ENST00000541286 DCANP1Q8TF63 244 aa10.5□□□□□ -0.73
SFSWAP-210ENST00000541286 ANK2Q01484 3957 aa10.5□□□□□ -0.73
SFSWAP-210ENST00000541286 PROK1P58294 105 aa10.5□□□□□ -0.73
SFSWAP-210ENST00000541286 Q8N2B8 174 aa10.5□□□□□ -0.73
SFSWAP-210ENST00000541286 KIF25-AS1Q9Y6Z4 181 aa10.5□□□□□ -0.73
SFSWAP-210ENST00000541286 TRAV8-3A0A0A6YYJ7 113 aa10.49□□□□□ -0.73
SFSWAP-210ENST00000541286 M0QXV9 152 aa10.49□□□□□ -0.73
SFSWAP-210ENST00000541286 KLK9Q2XQG4 91 aa10.49□□□□□ -0.73
SFSWAP-210ENST00000541286 SBSPONQ8IVN8 264 aa10.49□□□□□ -0.73
SFSWAP-210ENST00000541286 TMEM86BQ8N661 226 aa10.49□□□□□ -0.73
SFSWAP-210ENST00000541286 TNFRSF18Q9Y5U5 241 aa10.49□□□□□ -0.73
SFSWAP-210ENST00000541286 IGIPA6NJ69 53 aa10.49□□□□□ -0.73
SFSWAP-210ENST00000541286 KLLNB2CW77 178 aa10.49□□□□□ -0.73
SFSWAP-210ENST00000541286 H3BMM0 161 aa10.49□□□□□ -0.73
SFSWAP-210ENST00000541286 POLR2KP53803 58 aaKnown RBP10.49□□□□□ -0.73
SFSWAP-210ENST00000541286 UBE2WQ96B02 151 aa10.49□□□□□ -0.73
SFSWAP-210ENST00000541286 A0A0J9YXV3 536 aa10.48□□□□□ -0.73
SFSWAP-210ENST00000541286 TMEM263Q8WUH6 116 aaKnown RBP10.48□□□□□ -0.73
SFSWAP-210ENST00000541286 LINC01619G3V211 115 aa10.48□□□□□ -0.73
SFSWAP-210ENST00000541286 FAM19A4Q96LR4 140 aa10.48□□□□□ -0.73
SFSWAP-210ENST00000541286 ATXN8Q156A1 80 aa10.47□□□□□ -0.73
SFSWAP-210ENST00000541286 MDFIQ99750 246 aa10.47□□□□□ -0.73
SFSWAP-210ENST00000541286 TRGV11A0A075B6L2 103 aa10.47□□□□□ -0.73
SFSWAP-210ENST00000541286 IGHV1OR15-1A0A075B7D0 117 aa10.47□□□□□ -0.73
SFSWAP-210ENST00000541286 IGHV3-16A0A0C4DH30 117 aa10.47□□□□□ -0.73
SFSWAP-210ENST00000541286 HOXD3P31249 432 aaPredicted RBP10.47□□□□□ -0.73
SFSWAP-210ENST00000541286 FAM236AA0A1B0GUQ0 79 aa10.46□□□□□ -0.73
SFSWAP-210ENST00000541286 FAM236BA0A1B0GV22 79 aa10.46□□□□□ -0.73
SFSWAP-210ENST00000541286 LINC00694P0DN24 101 aa10.46□□□□□ -0.73
SFSWAP-210ENST00000541286 A0A0J9YX75 114 aa10.46□□□□□ -0.74
SFSWAP-210ENST00000541286 AMELXQ99217 191 aa10.46□□□□□ -0.74
SFSWAP-210ENST00000541286 MED14OSP0DP75 135 aa10.45□□□□□ -0.74
SFSWAP-210ENST00000541286 IGHV3OR16-12A0A075B7B8 117 aa10.45□□□□□ -0.74
SFSWAP-210ENST00000541286 IGHV3-38A0A0C4DH36 116 aa10.45□□□□□ -0.74
SFSWAP-210ENST00000541286 H3BUA1 57 aa10.45□□□□□ -0.74
SFSWAP-210ENST00000541286 H7C423 109 aa10.45□□□□□ -0.74
SFSWAP-210ENST00000541286 M0QY20 66 aa10.45□□□□□ -0.74
SFSWAP-210ENST00000541286 DEFB131AP59861 70 aa10.45□□□□□ -0.74
SFSWAP-210ENST00000541286 Q9UF83 564 aa10.45□□□□□ -0.74
SFSWAP-210ENST00000541286 CMYA5Q8N3K9 4069 aa10.45□□□□□ -0.74
SFSWAP-210ENST00000541286 PAPPA-AS1Q5QFB9 102 aa10.45□□□□□ -0.74
SFSWAP-210ENST00000541286 ADAMTSL4-AS1Q5T5F5 129 aa10.44□□□□□ -0.74
SFSWAP-210ENST00000541286 LGALS9O00182 355 aa10.44□□□□□ -0.74
SFSWAP-210ENST00000541286 ZNF625Q96I27 306 aaPredicted RBP10.44□□□□□ -0.74
SFSWAP-210ENST00000541286 TMEM141Q96I45 108 aa10.44□□□□□ -0.74
SFSWAP-210ENST00000541286 TRBV27A0A0K0K1C4 114 aa10.42□□□□□ -0.74
SFSWAP-210ENST00000541286 APRG1Q8IVJ8 170 aa10.42□□□□□ -0.74
SFSWAP-210ENST00000541286 TRBV10-2A0A0K0K1G8 114 aa10.42□□□□□ -0.74
SFSWAP-210ENST00000541286 UBE2E2Q96LR5 201 aa10.42□□□□□ -0.74
SFSWAP-210ENST00000541286 TIMM17AQ99595 171 aa10.42□□□□□ -0.74
SFSWAP-210ENST00000541286 K7EMT4 169 aa10.41□□□□□ -0.74
SFSWAP-210ENST00000541286 C16orf95Q9H693 158 aa10.41□□□□□ -0.74
SFSWAP-210ENST00000541286 I3L3M4 83 aa10.41□□□□□ -0.74
SFSWAP-210ENST00000541286 K7EQG2 157 aa10.41□□□□□ -0.74
SFSWAP-210ENST00000541286 CCL24O00175 119 aa10.41□□□□□ -0.74
SFSWAP-210ENST00000541286 NXPH4O95158 308 aa10.41□□□□□ -0.74
SFSWAP-210ENST00000541286 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.4□□□□□ -0.74
SFSWAP-210ENST00000541286 IGKV2-29A2NJV5 120 aaPredicted RBP10.4□□□□□ -0.74
SFSWAP-210ENST00000541286 C20orf203Q8NBC4 194 aa10.4□□□□□ -0.74
SFSWAP-210ENST00000541286 A0A0J9YXY3 114 aa10.4□□□□□ -0.74
SFSWAP-210ENST00000541286 C9orf85Q96MD7 179 aa10.4□□□□□ -0.74
SFSWAP-210ENST00000541286 ICOSQ9Y6W8 199 aa10.4□□□□□ -0.74
SFSWAP-210ENST00000541286 C9orf153Q5TBE3 101 aa10.39□□□□□ -0.75
SFSWAP-210ENST00000541286 RBMY1A1P0DJD3 496 aaKnown RBP10.39□□□□□ -0.75
SFSWAP-210ENST00000541286 RBMY1CP0DJD4 496 aa10.39□□□□□ -0.75
SFSWAP-210ENST00000541286 RBMY1FQ15415 496 aaKnown RBP10.39□□□□□ -0.75
SFSWAP-210ENST00000541286 LINC01587Q99440 93 aa10.38□□□□□ -0.75
SFSWAP-210ENST00000541286 IGLV4-3A0A075B6K6 122 aa10.38□□□□□ -0.75
SFSWAP-210ENST00000541286 NDUFA7O95182 113 aa10.38□□□□□ -0.75
SFSWAP-210ENST00000541286 TMEM223A0PJW6 202 aa10.37□□□□□ -0.75
SFSWAP-210ENST00000541286 IGHV3-30-3P0DP02 117 aa10.37□□□□□ -0.75
SFSWAP-210ENST00000541286 M0R2P5 195 aa10.37□□□□□ -0.75
SFSWAP-210ENST00000541286 C4orf3Q8WVX3 66 aa10.37□□□□□ -0.75
SFSWAP-210ENST00000541286 TIMM21Q9BVV7 248 aa10.37□□□□□ -0.75
SFSWAP-210ENST00000541286 RNF152Q8N8N0 203 aa10.37□□□□□ -0.75
SFSWAP-210ENST00000541286 LEPROTO15243 131 aa10.35□□□□□ -0.75
SFSWAP-210ENST00000541286 RPL13AP40429 203 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms