RNA–Protein interactions for RNA: ENST00000541029.1

ATN1-204, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-204ENST00000541029 CHTF8P0CG12 524 aa12.8□□□□□ -0.36
ATN1-204ENST00000541029 CFAP161Q6P656 301 aa12.8□□□□□ -0.36
ATN1-204ENST00000541029 KRTAP29-1A8MX34 341 aaPredicted RBP12.79□□□□□ -0.36
ATN1-204ENST00000541029 FOXI1Q12951 378 aa12.79□□□□□ -0.36
ATN1-204ENST00000541029 CIRBPQ14011 172 aaKnown RBP12.79□□□□□ -0.36
ATN1-204ENST00000541029 NRACQ8N912 160 aa12.79□□□□□ -0.36
ATN1-204ENST00000541029 SMIM27A0A1W2PRY6 76 aa12.78□□□□□ -0.36
ATN1-204ENST00000541029 C7orf77A4D0Y5 90 aa12.78□□□□□ -0.36
ATN1-204ENST00000541029 XCL1P47992 114 aa12.78□□□□□ -0.36
ATN1-204ENST00000541029 PEA15Q15121 130 aa12.78□□□□□ -0.36
ATN1-204ENST00000541029 GVQW2A0A096LPI5 108 aaPredicted RBP12.77□□□□□ -0.37
ATN1-204ENST00000541029 LINC00959A0A1B0GUT2 108 aa12.77□□□□□ -0.37
ATN1-204ENST00000541029 CCL25O15444 150 aa12.77□□□□□ -0.37
ATN1-204ENST00000541029 MRPL52Q86TS9 123 aaKnown RBP12.77□□□□□ -0.37
ATN1-204ENST00000541029 CAMPP49913 170 aa12.76□□□□□ -0.37
ATN1-204ENST00000541029 HNRNPA3P51991 378 aaKnown RBP12.76□□□□□ -0.37
ATN1-204ENST00000541029 SUMO2P61956 95 aaKnown RBP12.76□□□□□ -0.37
ATN1-204ENST00000541029 MRPL51Q4U2R6 128 aaKnown RBP12.76□□□□□ -0.37
ATN1-204ENST00000541029 SPACA4Q8TDM5 124 aa12.76□□□□□ -0.37
ATN1-204ENST00000541029 VCYO14598 125 aa12.75□□□□□ -0.37
ATN1-204ENST00000541029 FCER1GP30273 86 aa12.75□□□□□ -0.37
ATN1-204ENST00000541029 FAM104BQ5XKR9 115 aa12.75□□□□□ -0.37
ATN1-204ENST00000541029 SMDT1Q9H4I9 107 aa12.75□□□□□ -0.37
ATN1-204ENST00000541029 CDC42SE2Q9NRR3 84 aa12.75□□□□□ -0.37
ATN1-204ENST00000541029 PPP1R17O96001 155 aa12.74□□□□□ -0.37
ATN1-204ENST00000541029 A0A087WYN8 130 aa12.73□□□□□ -0.37
ATN1-204ENST00000541029 COX6A2Q02221 97 aa12.73□□□□□ -0.37
ATN1-204ENST00000541029 ZNF664Q8N3J9 261 aa12.73□□□□□ -0.37
ATN1-204ENST00000541029 HMCN2Q8NDA2 5059 aa12.73□□□□□ -0.37
ATN1-204ENST00000541029 PPP1R2P9O14990 202 aa12.72□□□□□ -0.37
ATN1-204ENST00000541029 SS18Q15532 418 aa12.72□□□□□ -0.37
ATN1-204ENST00000541029 MRPL54Q6P161 138 aaKnown RBP12.72□□□□□ -0.37
ATN1-204ENST00000541029 DPH3Q96FX2 82 aa12.72□□□□□ -0.37
ATN1-204ENST00000541029 KIR2DL4Q99706 377 aa12.72□□□□□ -0.37
ATN1-204ENST00000541029 RNASE13Q5GAN3 156 aaKnown RBP12.71□□□□□ -0.37
ATN1-204ENST00000541029 PRSS3P2Q8NHM4 247 aa12.71□□□□□ -0.37
ATN1-204ENST00000541029 LINC00526Q96FQ7 95 aa12.71□□□□□ -0.37
ATN1-204ENST00000541029 UBE2D4Q9Y2X8 147 aa12.71□□□□□ -0.37
ATN1-204ENST00000541029 IGHV1-58A0A0C4DH39 117 aa12.7□□□□□ -0.38
ATN1-204ENST00000541029 IGKV2-24A0A0C4DH68 120 aa12.7□□□□□ -0.38
ATN1-204ENST00000541029 A0A1B0GW15 77 aa12.7□□□□□ -0.38
ATN1-204ENST00000541029 CD164L2Q6UWJ8 174 aa12.7□□□□□ -0.38
ATN1-204ENST00000541029 CKS2P33552 79 aa12.69□□□□□ -0.38
ATN1-204ENST00000541029 HBBP68871 147 aa12.69□□□□□ -0.38
ATN1-204ENST00000541029 A0A1B0GXF2 115 aa12.68□□□□□ -0.38
ATN1-204ENST00000541029 LINC00862A6NCI5 91 aa12.68□□□□□ -0.38
ATN1-204ENST00000541029 OXTP01178 125 aa12.68□□□□□ -0.38
ATN1-204ENST00000541029 MAJINQ3KP22 176 aa12.68□□□□□ -0.38
ATN1-204ENST00000541029 Q6ZUT4 128 aa12.68□□□□□ -0.38
ATN1-204ENST00000541029 C20orf78Q9BR46 151 aa12.68□□□□□ -0.38
ATN1-204ENST00000541029 PLAC8Q9NZF1 115 aa12.68□□□□□ -0.38
ATN1-204ENST00000541029 TRBV24-1A0A075B6N3 115 aa12.67□□□□□ -0.38
ATN1-204ENST00000541029 A0A096LNI7 61 aa12.67□□□□□ -0.38
ATN1-204ENST00000541029 D6R8Y8 96 aa12.67□□□□□ -0.38
ATN1-204ENST00000541029 TNFRSF6BO95407 300 aa12.67□□□□□ -0.38
ATN1-204ENST00000541029 SMAGPQ0VAQ4 97 aa12.67□□□□□ -0.38
ATN1-204ENST00000541029 CSDC2Q9Y534 153 aaKnown RBP12.67□□□□□ -0.38
ATN1-204ENST00000541029 S100A8P05109 93 aa12.66□□□□□ -0.38
ATN1-204ENST00000541029 CARD19Q96LW7 228 aa12.66□□□□□ -0.38
ATN1-204ENST00000541029 SMIM2Q9BVW6 85 aa12.66□□□□□ -0.38
ATN1-204ENST00000541029 F8W036 122 aa12.65□□□□□ -0.38
ATN1-204ENST00000541029 NPYP01303 97 aa12.65□□□□□ -0.38
ATN1-204ENST00000541029 RPL32P62910 135 aaKnown RBP12.65□□□□□ -0.38
ATN1-204ENST00000541029 TRAV13-1A0A0B4J241 112 aa12.64□□□□□ -0.39
ATN1-204ENST00000541029 C1orf196B1AJZ1 125 aa12.64□□□□□ -0.39
ATN1-204ENST00000541029 PHOX2AO14813 284 aa12.64□□□□□ -0.39
ATN1-204ENST00000541029 RPL39P62891 51 aaKnown RBP12.64□□□□□ -0.39
ATN1-204ENST00000541029 ZNF561-AS1K7EIQ3 104 aa12.63□□□□□ -0.39
ATN1-204ENST00000541029 STPG4Q8N801 248 aa12.63□□□□□ -0.39
ATN1-204ENST00000541029 TMEM18Q96B42 140 aa12.63□□□□□ -0.39
ATN1-204ENST00000541029 TIMM21Q9BVV7 248 aa12.63□□□□□ -0.39
ATN1-204ENST00000541029 COX7A2LO14548 114 aa12.62□□□□□ -0.39
ATN1-204ENST00000541029 MALP21145 153 aa12.62□□□□□ -0.39
ATN1-204ENST00000541029 TCAPO15273 167 aa12.61□□□□□ -0.39
ATN1-204ENST00000541029 SYCNQ0VAF6 134 aa12.61□□□□□ -0.39
ATN1-204ENST00000541029 ATP5L2Q7Z4Y8 100 aa12.61□□□□□ -0.39
ATN1-204ENST00000541029 C7orf33Q8WU49 177 aa12.61□□□□□ -0.39
ATN1-204ENST00000541029 IGLV4-69A0A075B6H9 119 aa12.6□□□□□ -0.39
ATN1-204ENST00000541029 FAM104AQ969W3 186 aa12.6□□□□□ -0.39
ATN1-204ENST00000541029 PKIGQ9Y2B9 76 aa12.6□□□□□ -0.39
ATN1-204ENST00000541029 PPBPP02775 128 aa12.59□□□□□ -0.39
ATN1-204ENST00000541029 C5orf38Q86SI9 138 aa12.59□□□□□ -0.39
ATN1-204ENST00000541029 ORMDL3Q8N138 153 aa12.59□□□□□ -0.39
ATN1-204ENST00000541029 Q6ZRU5 148 aa12.58□□□□□ -0.4
ATN1-204ENST00000541029 OPRPNQ99935 248 aaPredicted RBP12.58□□□□□ -0.4
ATN1-204ENST00000541029 SPANXA1Q9NS26 97 aa12.58□□□□□ -0.4
ATN1-204ENST00000541029 TNXBP22105 4242 aa12.58□□□□□ -0.4
ATN1-204ENST00000541029 PNRC1Q12796 327 aaPredicted RBP12.57□□□□□ -0.4
ATN1-204ENST00000541029 PRELID3AQ96N28 172 aa12.57□□□□□ -0.4
ATN1-204ENST00000541029 LINC00474Q9P2X8 69 aa12.57□□□□□ -0.4
ATN1-204ENST00000541029 RAB14P61106 215 aa12.56□□□□□ -0.4
ATN1-204ENST00000541029 PRR3P79522 188 aaKnown RBP12.56□□□□□ -0.4
ATN1-204ENST00000541029 TMEM136Q6ZRR5 245 aa12.56□□□□□ -0.4
ATN1-204ENST00000541029 CAMK2N2Q96S95 79 aa12.56□□□□□ -0.4
ATN1-204ENST00000541029 SPAG11BQ08648 103 aa12.55□□□□□ -0.4
ATN1-204ENST00000541029 LOC107984640A0A0U1RRK4 108 aa12.54□□□□□ -0.4
ATN1-204ENST00000541029 IFITM10A6NMD0 228 aa12.54□□□□□ -0.4
ATN1-204ENST00000541029 APOMO95445 188 aa12.54□□□□□ -0.4
ATN1-204ENST00000541029 PTTG1IPP53801 180 aa12.54□□□□□ -0.4
ATN1-204ENST00000541029 MRPS36P82909 103 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms