RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 IGLV10-54A0A075B6I4 117 aa3.93□□□□□ -1.78
PROM1-220ENST00000540805 IGKV2D-24A0A075B6R9 120 aa3.93□□□□□ -1.78
PROM1-220ENST00000540805 C11orf86A6NJI1 115 aa3.93□□□□□ -1.78
PROM1-220ENST00000540805 GNRH2O43555 120 aa3.93□□□□□ -1.78
PROM1-220ENST00000540805 EIF4EBP3O60516 100 aaPredicted RBP3.93□□□□□ -1.78
PROM1-220ENST00000540805 IGHV3-30P01768 117 aa3.93□□□□□ -1.78
PROM1-220ENST00000540805 IGHV3-30-5P0DP03 117 aa3.93□□□□□ -1.78
PROM1-220ENST00000540805 Q8N1Y9 231 aa3.93□□□□□ -1.78
PROM1-220ENST00000540805 KIR2DL5BQ8NHK3 375 aa3.93□□□□□ -1.78
PROM1-220ENST00000540805 ZFAND3Q9H8U3 227 aa3.93□□□□□ -1.78
PROM1-220ENST00000540805 SPANXA1Q9NS26 97 aa3.93□□□□□ -1.78
PROM1-220ENST00000540805 PRO1854Q9UHT4 67 aa3.93□□□□□ -1.78
PROM1-220ENST00000540805 IGHV4OR15-8A0A075B7B6 117 aa3.93□□□□□ -1.78
PROM1-220ENST00000540805 A0A087WW49 117 aa3.93□□□□□ -1.78
PROM1-220ENST00000540805 C9orf47Q6ZRZ4 202 aa3.93□□□□□ -1.78
PROM1-220ENST00000540805 ZANQ9Y493 2812 aa3.93□□□□□ -1.78
PROM1-220ENST00000540805 C4orf26Q17RF5 130 aa3.92□□□□□ -1.78
PROM1-220ENST00000540805 IGLV4-69A0A075B6H9 119 aa3.92□□□□□ -1.78
PROM1-220ENST00000540805 RBMY1BA6NDE4 496 aaKnown RBP3.92□□□□□ -1.78
PROM1-220ENST00000540805 RBMY1EA6NEQ0 496 aaKnown RBP3.92□□□□□ -1.78
PROM1-220ENST00000540805 SMIM9A6NGZ8 99 aa3.92□□□□□ -1.78
PROM1-220ENST00000540805 RBMY1DP0C7P1 496 aaKnown RBP3.92□□□□□ -1.78
PROM1-220ENST00000540805 RBMY1A1P0DJD3 496 aaKnown RBP3.92□□□□□ -1.78
PROM1-220ENST00000540805 RBMY1CP0DJD4 496 aa3.92□□□□□ -1.78
PROM1-220ENST00000540805 U3KQE9 123 aa3.92□□□□□ -1.78
PROM1-220ENST00000540805 SDHAF1A6NFY7 115 aa3.92□□□□□ -1.78
PROM1-220ENST00000540805 CRYGDP07320 174 aa3.92□□□□□ -1.78
PROM1-220ENST00000540805 KRTAP10-9P60411 292 aa3.92□□□□□ -1.78
PROM1-220ENST00000540805 PMVKQ15126 192 aa3.92□□□□□ -1.78
PROM1-220ENST00000540805 SS18Q15532 418 aa3.92□□□□□ -1.78
PROM1-220ENST00000540805 PRR9Q5T870 116 aa3.92□□□□□ -1.78
PROM1-220ENST00000540805 SLC25A29Q8N8R3 303 aa3.92□□□□□ -1.78
PROM1-220ENST00000540805 Q8N9W7 124 aa3.92□□□□□ -1.78
PROM1-220ENST00000540805 COPS9Q8WXC6 57 aa3.92□□□□□ -1.78
PROM1-220ENST00000540805 TP53TG1Q9Y2A0 90 aa3.92□□□□□ -1.78
PROM1-220ENST00000540805 CLPSL1A2RUU4 121 aa3.91□□□□□ -1.78
PROM1-220ENST00000540805 LMO4P61968 165 aa3.91□□□□□ -1.78
PROM1-220ENST00000540805 TMEM61Q8N0U2 210 aa3.91□□□□□ -1.78
PROM1-220ENST00000540805 LY6G5BQ8NDX9 201 aa3.91□□□□□ -1.78
PROM1-220ENST00000540805 LENEPQ9Y5L5 61 aa3.91□□□□□ -1.78
PROM1-220ENST00000540805 FLNAP21333 2647 aaKnown RBP3.91□□□□□ -1.78
PROM1-220ENST00000540805 DNAJC9-AS1A6NH13 148 aa3.91□□□□□ -1.78
PROM1-220ENST00000540805 ODF3BA8MYP8 253 aa3.91□□□□□ -1.78
PROM1-220ENST00000540805 TRBV12-3P01733 135 aa3.91□□□□□ -1.78
PROM1-220ENST00000540805 XCL1P47992 114 aa3.91□□□□□ -1.78
PROM1-220ENST00000540805 TSPEAR-AS2P59090 65 aa3.91□□□□□ -1.78
PROM1-220ENST00000540805 TRAV8-4A0A0B4J246 113 aa3.91□□□□□ -1.78
PROM1-220ENST00000540805 TRAV25A0A0B4J276 109 aa3.91□□□□□ -1.78
PROM1-220ENST00000540805 WIPF1O43516 503 aa3.91□□□□□ -1.78
PROM1-220ENST00000540805 OXTP01178 125 aa3.91□□□□□ -1.78
PROM1-220ENST00000540805 Q6Q795 121 aa3.91□□□□□ -1.78
PROM1-220ENST00000540805 TMEM141Q96I45 108 aa3.91□□□□□ -1.78
PROM1-220ENST00000540805 FAM236AA0A1B0GUQ0 79 aa3.9□□□□□ -1.78
PROM1-220ENST00000540805 FAM236BA0A1B0GV22 79 aa3.9□□□□□ -1.78
PROM1-220ENST00000540805 J3QQQ9 107 aa3.9□□□□□ -1.78
PROM1-220ENST00000540805 IGHV3-33P01772 117 aa3.9□□□□□ -1.78
PROM1-220ENST00000540805 IGHV3-30-3P0DP02 117 aa3.9□□□□□ -1.78
PROM1-220ENST00000540805 ATXN8Q156A1 80 aa3.9□□□□□ -1.78
PROM1-220ENST00000540805 C9orf66Q5T8R8 295 aa3.9□□□□□ -1.78
PROM1-220ENST00000540805 Q8N6K4 173 aa3.9□□□□□ -1.78
PROM1-220ENST00000540805 DNHD1Q96M86 4753 aa3.9□□□□□ -1.78
PROM1-220ENST00000540805 TSHBP01222 138 aa3.9□□□□□ -1.78
PROM1-220ENST00000540805 P0DMU3 169 aa3.9□□□□□ -1.78
PROM1-220ENST00000540805 FAM231AP0DMU4 169 aa3.9□□□□□ -1.78
PROM1-220ENST00000540805 FAM231CP0DMU5 169 aa3.9□□□□□ -1.78
PROM1-220ENST00000540805 MED14OSP0DP75 135 aa3.9□□□□□ -1.78
PROM1-220ENST00000540805 C10orf99Q6UWK7 81 aa3.9□□□□□ -1.78
PROM1-220ENST00000540805 HRCT1Q6UXD1 115 aa3.9□□□□□ -1.78
PROM1-220ENST00000540805 C5orf38Q86SI9 138 aa3.9□□□□□ -1.78
PROM1-220ENST00000540805 LAMTOR3Q9UHA4 124 aa3.9□□□□□ -1.78
PROM1-220ENST00000540805 ZNF580Q9UK33 172 aa3.9□□□□□ -1.78
PROM1-220ENST00000540805 A0A0B4J2C4 111 aa3.9□□□□□ -1.79
PROM1-220ENST00000540805 HERVK_113P63121 156 aa3.9□□□□□ -1.79
PROM1-220ENST00000540805 LINC01620Q4KN68 170 aa3.9□□□□□ -1.79
PROM1-220ENST00000540805 C5orf47Q569G3 176 aa3.9□□□□□ -1.79
PROM1-220ENST00000540805 TIMM17AQ99595 171 aa3.9□□□□□ -1.79
PROM1-220ENST00000540805 ANK3Q12955 4377 aaKnown RBP3.9□□□□□ -1.79
PROM1-220ENST00000540805 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.89□□□□□ -1.79
PROM1-220ENST00000540805 IGIPA6NJ69 53 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 LY6G6DO95868 133 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 IGF1P05019 195 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 UNQ9165/PRO28630Q6UXU0 137 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 GPHB5Q86YW7 130 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 TMEM263Q8WUH6 116 aaKnown RBP3.89□□□□□ -1.79
PROM1-220ENST00000540805 CCDC140Q96MF4 163 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 TMEM243Q9BU79 118 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 RPL39P62891 51 aaKnown RBP3.89□□□□□ -1.79
PROM1-220ENST00000540805 EBI3Q14213 229 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 ZFAND2AQ8N6M9 145 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 LEPROTO15243 131 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 SPART-AS1P0CW21 52 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 GYPEP15421 78 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 C5orf56Q8N8D9 126 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 LINC00482Q8N8I6 264 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 C20orf173Q96LM9 149 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 AMELXQ99217 191 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 FBN3Q75N90 2809 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 TRBV10-2A0A0K0K1G8 114 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 CCL18P55774 89 aa3.89□□□□□ -1.79
PROM1-220ENST00000540805 UBE2BP63146 152 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 218.7 ms