RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 HTN3P15516 51 aa9.93□□□□□ -0.82
CYB561A3-216ENST00000540755 Q6ZTC4 211 aa9.93□□□□□ -0.82
CYB561A3-216ENST00000540755 SPANXA1Q9NS26 97 aa9.93□□□□□ -0.82
CYB561A3-216ENST00000540755 UBE2D4Q9Y2X8 147 aa9.93□□□□□ -0.82
CYB561A3-216ENST00000540755 STARD9Q9P2P6 4700 aa9.93□□□□□ -0.82
CYB561A3-216ENST00000540755 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.92□□□□□ -0.82
CYB561A3-216ENST00000540755 hDV102S1A0JD36 115 aa9.92□□□□□ -0.82
CYB561A3-216ENST00000540755 IGKV2-29A2NJV5 120 aaPredicted RBP9.92□□□□□ -0.82
CYB561A3-216ENST00000540755 DLEU1O43261 78 aa9.92□□□□□ -0.82
CYB561A3-216ENST00000540755 HNRNPA3P51991 378 aaKnown RBP9.92□□□□□ -0.82
CYB561A3-216ENST00000540755 SMAGPQ0VAQ4 97 aa9.92□□□□□ -0.82
CYB561A3-216ENST00000540755 TIMM21Q9BVV7 248 aa9.92□□□□□ -0.82
CYB561A3-216ENST00000540755 TRBV25-1A0A075B6N4 114 aa9.91□□□□□ -0.82
CYB561A3-216ENST00000540755 H3BNG1 76 aa9.91□□□□□ -0.82
CYB561A3-216ENST00000540755 H7C423 109 aa9.91□□□□□ -0.82
CYB561A3-216ENST00000540755 COX8AP10176 69 aa9.91□□□□□ -0.82
CYB561A3-216ENST00000540755 NANOS2P60321 138 aaKnown RBP9.91□□□□□ -0.82
CYB561A3-216ENST00000540755 MAJINQ3KP22 176 aa9.91□□□□□ -0.82
CYB561A3-216ENST00000540755 MUC7Q8TAX7 377 aa9.91□□□□□ -0.82
CYB561A3-216ENST00000540755 TMEM243Q9BU79 118 aa9.91□□□□□ -0.82
CYB561A3-216ENST00000540755 CHTOPQ9Y3Y2 248 aaKnown RBP9.91□□□□□ -0.82
CYB561A3-216ENST00000540755 IGLV4-3A0A075B6K6 122 aa9.91□□□□□ -0.82
CYB561A3-216ENST00000540755 TRBV6-8A0A0A6YYG3 113 aa9.91□□□□□ -0.82
CYB561A3-216ENST00000540755 SIVA1O15304 175 aa9.91□□□□□ -0.82
CYB561A3-216ENST00000540755 PMVKQ15126 192 aa9.91□□□□□ -0.82
CYB561A3-216ENST00000540755 MRPL23Q16540 153 aaKnown RBP9.91□□□□□ -0.82
CYB561A3-216ENST00000540755 CASC10Q5T4H9 136 aa9.91□□□□□ -0.82
CYB561A3-216ENST00000540755 SH2D6Q7Z4S9 175 aa9.91□□□□□ -0.82
CYB561A3-216ENST00000540755 ICOSQ9Y6W8 199 aa9.91□□□□□ -0.82
CYB561A3-216ENST00000540755 CSMD3Q7Z407 3707 aa9.9□□□□□ -0.82
CYB561A3-216ENST00000540755 PRSS29PA6NIE9 313 aa9.9□□□□□ -0.83
CYB561A3-216ENST00000540755 MRPL35Q9NZE8 188 aaKnown RBP9.9□□□□□ -0.83
CYB561A3-216ENST00000540755 FAM104AQ969W3 186 aa9.89□□□□□ -0.83
CYB561A3-216ENST00000540755 CSDC2Q9Y534 153 aaKnown RBP9.89□□□□□ -0.83
CYB561A3-216ENST00000540755 DEFB131BA0A096LNP1 70 aa9.88□□□□□ -0.83
CYB561A3-216ENST00000540755 UBE2L6O14933 153 aa9.88□□□□□ -0.83
CYB561A3-216ENST00000540755 FGF6P10767 208 aa9.88□□□□□ -0.83
CYB561A3-216ENST00000540755 CTAG1AP78358 180 aa9.88□□□□□ -0.83
CYB561A3-216ENST00000540755 MRPS36P82909 103 aaKnown RBP9.88□□□□□ -0.83
CYB561A3-216ENST00000540755 AMELXQ99217 191 aa9.88□□□□□ -0.83
CYB561A3-216ENST00000540755 OPRPNQ99935 248 aaPredicted RBP9.88□□□□□ -0.83
CYB561A3-216ENST00000540755 C2orf88Q9BSF0 95 aa9.88□□□□□ -0.83
CYB561A3-216ENST00000540755 CST9LQ9H4G1 147 aa9.88□□□□□ -0.83
CYB561A3-216ENST00000540755 A0A096LPF7 62 aa9.87□□□□□ -0.83
CYB561A3-216ENST00000540755 CEMP1Q6PRD7 247 aaPredicted RBP9.87□□□□□ -0.83
CYB561A3-216ENST00000540755 BOD1L2Q8IYS8 172 aa9.87□□□□□ -0.83
CYB561A3-216ENST00000540755 VCX2Q9H322 139 aa9.87□□□□□ -0.83
CYB561A3-216ENST00000540755 EPPK1P58107 5090 aaKnown RBP9.87□□□□□ -0.83
CYB561A3-216ENST00000540755 TRAV10A0A0B4J240 114 aa9.86□□□□□ -0.83
CYB561A3-216ENST00000540755 ZNF25P17030 456 aaPredicted RBP9.86□□□□□ -0.83
CYB561A3-216ENST00000540755 DGAT2L7PQ6IED9 249 aa9.86□□□□□ -0.83
CYB561A3-216ENST00000540755 DNAH1Q9P2D7 4330 aa9.86□□□□□ -0.83
CYB561A3-216ENST00000540755 ANKRD39Q53RE8 183 aa9.85□□□□□ -0.83
CYB561A3-216ENST00000540755 ZC2HC1BQ5TFG8 222 aa9.85□□□□□ -0.83
CYB561A3-216ENST00000540755 AMMECR1LQ6DCA0 310 aa9.85□□□□□ -0.83
CYB561A3-216ENST00000540755 Q6ZUT4 128 aa9.85□□□□□ -0.83
CYB561A3-216ENST00000540755 STPG4Q8N801 248 aa9.85□□□□□ -0.83
CYB561A3-216ENST00000540755 TIRAPP58753 221 aa9.85□□□□□ -0.83
CYB561A3-216ENST00000540755 TMEM101Q96IK0 257 aa9.85□□□□□ -0.83
CYB561A3-216ENST00000540755 CHCHD5Q9BSY4 110 aa9.85□□□□□ -0.83
CYB561A3-216ENST00000540755 IGLV4-69A0A075B6H9 119 aa9.84□□□□□ -0.83
CYB561A3-216ENST00000540755 HERVK_113P61574 105 aa9.84□□□□□ -0.83
CYB561A3-216ENST00000540755 GAGE6Q13070 117 aa9.84□□□□□ -0.83
CYB561A3-216ENST00000540755 NFE4Q86UQ8 179 aa9.84□□□□□ -0.83
CYB561A3-216ENST00000540755 OR5A1Q8NGJ0 315 aa9.84□□□□□ -0.83
CYB561A3-216ENST00000540755 LYSTQ99698 3801 aa9.84□□□□□ -0.83
CYB561A3-216ENST00000540755 SNHG12Q9BXW3 62 aa9.84□□□□□ -0.83
CYB561A3-216ENST00000540755 BIRC6Q9NR09 4857 aa9.83□□□□□ -0.84
CYB561A3-216ENST00000540755 LELP1Q5T871 98 aa9.83□□□□□ -0.84
CYB561A3-216ENST00000540755 CDC42SE2Q9NRR3 84 aa9.83□□□□□ -0.84
CYB561A3-216ENST00000540755 LCE6AA0A183 80 aa9.82□□□□□ -0.84
CYB561A3-216ENST00000540755 RNASE13Q5GAN3 156 aaKnown RBP9.82□□□□□ -0.84
CYB561A3-216ENST00000540755 ZFAND6Q6FIF0 208 aa9.82□□□□□ -0.84
CYB561A3-216ENST00000540755 HIGD1BQ9P298 99 aa9.82□□□□□ -0.84
CYB561A3-216ENST00000540755 A0A1B0GUV1 79 aa9.81□□□□□ -0.84
CYB561A3-216ENST00000540755 C11orf86A6NJI1 115 aa9.81□□□□□ -0.84
CYB561A3-216ENST00000540755 E9PLD3 99 aa9.81□□□□□ -0.84
CYB561A3-216ENST00000540755 LYPD5Q6UWN5 251 aa9.81□□□□□ -0.84
CYB561A3-216ENST00000540755 NMUP48645 174 aa9.8□□□□□ -0.84
CYB561A3-216ENST00000540755 COL5A1-AS1Q5SY13 56 aa9.8□□□□□ -0.84
CYB561A3-216ENST00000540755 UBE2D1P51668 147 aa9.79□□□□□ -0.84
CYB561A3-216ENST00000540755 FAM19A3Q7Z5A8 133 aa9.79□□□□□ -0.84
CYB561A3-216ENST00000540755 C15orf53Q8NAA6 179 aa9.79□□□□□ -0.84
CYB561A3-216ENST00000540755 CHAC1Q9BUX1 264 aa9.79□□□□□ -0.84
CYB561A3-216ENST00000540755 PLECQ15149 4684 aaKnown RBP9.79□□□□□ -0.84
CYB561A3-216ENST00000540755 IGLV4-60A0A075B6I1 120 aa9.79□□□□□ -0.84
CYB561A3-216ENST00000540755 A0A0J9YXV3 536 aa9.79□□□□□ -0.84
CYB561A3-216ENST00000540755 TINCRA0A1B0GVN0 87 aa9.79□□□□□ -0.84
CYB561A3-216ENST00000540755 SEC11AP67812 179 aa9.79□□□□□ -0.84
CYB561A3-216ENST00000540755 HYDINQ4G0P3 5121 aa9.78□□□□□ -0.84
CYB561A3-216ENST00000540755 TMEM262E9PQX1 116 aa9.78□□□□□ -0.84
CYB561A3-216ENST00000540755 RBX1P62877 108 aa9.78□□□□□ -0.84
CYB561A3-216ENST00000540755 MPV17L2Q567V2 206 aa9.78□□□□□ -0.84
CYB561A3-216ENST00000540755 TRAV8-6A0A0B4J262 113 aa9.77□□□□□ -0.85
CYB561A3-216ENST00000540755 EREGO14944 169 aa9.77□□□□□ -0.85
CYB561A3-216ENST00000540755 ZNF22P17026 224 aaPredicted RBP9.77□□□□□ -0.85
CYB561A3-216ENST00000540755 HSD52Q0P140 79 aa9.77□□□□□ -0.85
CYB561A3-216ENST00000540755 TAL2Q16559 108 aa9.77□□□□□ -0.85
CYB561A3-216ENST00000540755 C2orf91Q6ZV80 131 aa9.77□□□□□ -0.85
CYB561A3-216ENST00000540755 TMEM170BQ5T4T1 132 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms