RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 DUX3Q96PT4 197 aa8.17□□□□□ -1.1
CPT1A-206ENST00000540367 APCP25054 2843 aa8.17□□□□□ -1.1
CPT1A-206ENST00000540367 NDUFA1O15239 70 aa8.16□□□□□ -1.1
CPT1A-206ENST00000540367 PRM2P04554 102 aa8.16□□□□□ -1.1
CPT1A-206ENST00000540367 ATP5J2P56134 94 aa8.16□□□□□ -1.1
CPT1A-206ENST00000540367 NAV2Q8IVL1 2488 aa8.16□□□□□ -1.1
CPT1A-206ENST00000540367 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.15□□□□□ -1.1
CPT1A-206ENST00000540367 IGKV2-29A2NJV5 120 aaPredicted RBP8.15□□□□□ -1.1
CPT1A-206ENST00000540367 C10orf105Q8TEF2 133 aa8.15□□□□□ -1.1
CPT1A-206ENST00000540367 TMEM101Q96IK0 257 aa8.15□□□□□ -1.1
CPT1A-206ENST00000540367 Q9UF83 564 aa8.15□□□□□ -1.1
CPT1A-206ENST00000540367 NACAE9PAV3 2078 aa8.15□□□□□ -1.1
CPT1A-206ENST00000540367 TMEM89A2RUT3 159 aa8.15□□□□□ -1.1
CPT1A-206ENST00000540367 HTN1P15515 57 aa8.15□□□□□ -1.1
CPT1A-206ENST00000540367 SYNJ2BPP57105 145 aa8.15□□□□□ -1.1
CPT1A-206ENST00000540367 DAND5Q8N907 189 aa8.15□□□□□ -1.1
CPT1A-206ENST00000540367 LINC00467Q9BRT7 94 aa8.15□□□□□ -1.1
CPT1A-206ENST00000540367 IMUPQ9GZP8 106 aa8.15□□□□□ -1.1
CPT1A-206ENST00000540367 NIPBLQ6KC79 2804 aaeCLIP8.15□□□□□ -1.1
CPT1A-206ENST00000540367 IGLV5-45A0A087WSX0 123 aa8.14□□□□□ -1.11
CPT1A-206ENST00000540367 KNCNA6PVL3 124 aa8.14□□□□□ -1.11
CPT1A-206ENST00000540367 ACYP1P07311 99 aa8.14□□□□□ -1.11
CPT1A-206ENST00000540367 PIK3CD-AS1Q5SR53 167 aa8.14□□□□□ -1.11
CPT1A-206ENST00000540367 CCDC168Q8NDH2 2452 aa8.14□□□□□ -1.11
CPT1A-206ENST00000540367 CCL19Q99731 98 aa8.14□□□□□ -1.11
CPT1A-206ENST00000540367 CITED2Q99967 270 aaPredicted RBP8.14□□□□□ -1.11
CPT1A-206ENST00000540367 CDKN2A-AS1Q9UH64 79 aa8.14□□□□□ -1.11
CPT1A-206ENST00000540367 TIRAPP58753 221 aa8.14□□□□□ -1.11
CPT1A-206ENST00000540367 Q6ZSN1 163 aa8.14□□□□□ -1.11
CPT1A-206ENST00000540367 SONP18583 2426 aaKnown RBP8.14□□□□□ -1.11
CPT1A-206ENST00000540367 MSMBP08118 114 aa8.13□□□□□ -1.11
CPT1A-206ENST00000540367 CIRBPQ14011 172 aaKnown RBP8.13□□□□□ -1.11
CPT1A-206ENST00000540367 A8MTW9 85 aa8.12□□□□□ -1.11
CPT1A-206ENST00000540367 IGHV4-59P01825 116 aa8.12□□□□□ -1.11
CPT1A-206ENST00000540367 ZNF415Q09FC8 603 aa8.12□□□□□ -1.11
CPT1A-206ENST00000540367 LINC00308Q8TCZ7 52 aa8.12□□□□□ -1.11
CPT1A-206ENST00000540367 DNAJC30Q96LL9 226 aa8.12□□□□□ -1.11
CPT1A-206ENST00000540367 COX7A2LO14548 114 aa8.12□□□□□ -1.11
CPT1A-206ENST00000540367 SETD2Q9BYW2 2564 aaPredicted RBP8.12□□□□□ -1.11
CPT1A-206ENST00000540367 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.11□□□□□ -1.11
CPT1A-206ENST00000540367 CHCHD5Q9BSY4 110 aa8.11□□□□□ -1.11
CPT1A-206ENST00000540367 IGHV3-38A0A0C4DH36 116 aa8.11□□□□□ -1.11
CPT1A-206ENST00000540367 IGLV5-39A0A0G2JS06 123 aa8.11□□□□□ -1.11
CPT1A-206ENST00000540367 IGHV3-53P01767 116 aa8.11□□□□□ -1.11
CPT1A-206ENST00000540367 HOXD3P31249 432 aaPredicted RBP8.11□□□□□ -1.11
CPT1A-206ENST00000540367 LINC01587Q99440 93 aa8.11□□□□□ -1.11
CPT1A-206ENST00000540367 RBMY1BA6NDE4 496 aaKnown RBP8.1□□□□□ -1.11
CPT1A-206ENST00000540367 RBMY1EA6NEQ0 496 aaKnown RBP8.1□□□□□ -1.11
CPT1A-206ENST00000540367 RBMY1DP0C7P1 496 aaKnown RBP8.1□□□□□ -1.11
CPT1A-206ENST00000540367 Q9H8V8 135 aa8.1□□□□□ -1.11
CPT1A-206ENST00000540367 MYO9AB2RTY4 2548 aa8.1□□□□□ -1.11
CPT1A-206ENST00000540367 ATP5G1P05496 136 aa8.1□□□□□ -1.11
CPT1A-206ENST00000540367 DEFB131AP59861 70 aa8.1□□□□□ -1.11
CPT1A-206ENST00000540367 NOTCH3Q9UM47 2321 aa8.1□□□□□ -1.11
CPT1A-206ENST00000540367 IGHV3OR16-12A0A075B7B8 117 aa8.09□□□□□ -1.11
CPT1A-206ENST00000540367 KRTAP10-9P60411 292 aa8.09□□□□□ -1.11
CPT1A-206ENST00000540367 HERVK_113P63121 156 aa8.09□□□□□ -1.11
CPT1A-206ENST00000540367 COX6A2Q02221 97 aa8.09□□□□□ -1.11
CPT1A-206ENST00000540367 COPS9Q8WXC6 57 aa8.09□□□□□ -1.11
CPT1A-206ENST00000540367 DEFB136Q30KP8 78 aa8.09□□□□□ -1.11
CPT1A-206ENST00000540367 DGAT2L7PQ6IED9 249 aa8.09□□□□□ -1.11
CPT1A-206ENST00000540367 ITPR2Q14571 2701 aa8.09□□□□□ -1.11
CPT1A-206ENST00000540367 FAM236AA0A1B0GUQ0 79 aa8.08□□□□□ -1.12
CPT1A-206ENST00000540367 FAM236BA0A1B0GV22 79 aa8.08□□□□□ -1.12
CPT1A-206ENST00000540367 DEFB112Q30KQ8 113 aa8.08□□□□□ -1.12
CPT1A-206ENST00000540367 SOSTDC1Q6X4U4 206 aa8.08□□□□□ -1.12
CPT1A-206ENST00000540367 C18orf65Q6ZTR6 163 aa8.08□□□□□ -1.12
CPT1A-206ENST00000540367 C11orf72Q8NBR9 251 aa8.08□□□□□ -1.12
CPT1A-206ENST00000540367 VPREB3Q9UKI3 123 aa8.08□□□□□ -1.12
CPT1A-206ENST00000540367 TRAV25A0A0B4J276 109 aa8.08□□□□□ -1.12
CPT1A-206ENST00000540367 TRACP01848 142 aa8.08□□□□□ -1.12
CPT1A-206ENST00000540367 BEAN1Q3B7T3 259 aa8.08□□□□□ -1.12
CPT1A-206ENST00000540367 C5orf47Q569G3 176 aa8.08□□□□□ -1.12
CPT1A-206ENST00000540367 LINC00242Q5T6M2 205 aa8.08□□□□□ -1.12
CPT1A-206ENST00000540367 ZNF625Q96I27 306 aaPredicted RBP8.08□□□□□ -1.12
CPT1A-206ENST00000540367 SMIM1B2RUZ4 78 aa8.07□□□□□ -1.12
CPT1A-206ENST00000540367 B4DSR2 109 aa8.07□□□□□ -1.12
CPT1A-206ENST00000540367 RS1O15537 224 aa8.07□□□□□ -1.12
CPT1A-206ENST00000540367 FAM19A3Q7Z5A8 133 aa8.07□□□□□ -1.12
CPT1A-206ENST00000540367 LINC00643Q86TS7 51 aa8.07□□□□□ -1.12
CPT1A-206ENST00000540367 Q8N2B8 174 aa8.07□□□□□ -1.12
CPT1A-206ENST00000540367 ZNF843Q8N446 348 aa8.07□□□□□ -1.12
CPT1A-206ENST00000540367 SMCR5Q8TEV8 140 aa8.07□□□□□ -1.12
CPT1A-206ENST00000540367 ACANP16112 2415 aa8.07□□□□□ -1.12
CPT1A-206ENST00000540367 A0A0U1RRA0 63 aa8.07□□□□□ -1.12
CPT1A-206ENST00000540367 HIST2H2BCQ6DN03 193 aa8.07□□□□□ -1.12
CPT1A-206ENST00000540367 UBE2E2Q96LR5 201 aa8.07□□□□□ -1.12
CPT1A-206ENST00000540367 WNK1Q9H4A3 2382 aa8.06□□□□□ -1.12
CPT1A-206ENST00000540367 DAZ2Q13117 558 aaKnown RBP8.06□□□□□ -1.12
CPT1A-206ENST00000540367 DAZ4Q86SG3 579 aaKnown RBP8.06□□□□□ -1.12
CPT1A-206ENST00000540367 C3orf22Q8N5N4 141 aa8.06□□□□□ -1.12
CPT1A-206ENST00000540367 DAZ3Q9NR90 486 aaKnown RBP8.06□□□□□ -1.12
CPT1A-206ENST00000540367 ITPR3Q14573 2671 aa8.06□□□□□ -1.12
CPT1A-206ENST00000540367 UQCRQO14949 82 aa8.06□□□□□ -1.12
CPT1A-206ENST00000540367 C9orf153Q5TBE3 101 aa8.06□□□□□ -1.12
CPT1A-206ENST00000540367 SDIM1Q6ZPB5 146 aa8.06□□□□□ -1.12
CPT1A-206ENST00000540367 HELZ2Q9BYK8 2649 aaKnown RBP8.06□□□□□ -1.12
CPT1A-206ENST00000540367 PRIMA1Q86XR5 153 aa8.05□□□□□ -1.12
CPT1A-206ENST00000540367 NDUFA7O95182 113 aa8.05□□□□□ -1.12
CPT1A-206ENST00000540367 PPDPFQ9H3Y8 114 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms