RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 UBE2D2P62837 147 aa8.27□□□□□ -1.09
C11orf54-214ENST00000540113 PIK3CD-AS1Q5SR53 167 aa8.27□□□□□ -1.09
C11orf54-214ENST00000540113 ADAMTSL4-AS1Q5T5F5 129 aa8.27□□□□□ -1.09
C11orf54-214ENST00000540113 PRO1854Q9UHT4 67 aa8.27□□□□□ -1.09
C11orf54-214ENST00000540113 C2CD3Q4AC94 2353 aa8.27□□□□□ -1.09
C11orf54-214ENST00000540113 GCN1Q92616 2671 aaKnown RBP8.27□□□□□ -1.09
C11orf54-214ENST00000540113 PRSS2P07478 247 aa8.27□□□□□ -1.09
C11orf54-214ENST00000540113 SCGB1C2P0DMR2 95 aa8.27□□□□□ -1.09
C11orf54-214ENST00000540113 LINC00694P0DN24 101 aa8.27□□□□□ -1.09
C11orf54-214ENST00000540113 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.27□□□□□ -1.09
C11orf54-214ENST00000540113 COX6A2Q02221 97 aa8.26□□□□□ -1.09
C11orf54-214ENST00000540113 SMR3AQ99954 134 aa8.26□□□□□ -1.09
C11orf54-214ENST00000540113 DAND5Q8N907 189 aa8.25□□□□□ -1.09
C11orf54-214ENST00000540113 TMEM263Q8WUH6 116 aaKnown RBP8.25□□□□□ -1.09
C11orf54-214ENST00000540113 NOP10Q9NPE3 64 aaKnown RBP8.25□□□□□ -1.09
C11orf54-214ENST00000540113 CDKN2A-AS1Q9UH64 79 aa8.25□□□□□ -1.09
C11orf54-214ENST00000540113 NDUFA12Q9UI09 145 aa8.25□□□□□ -1.09
C11orf54-214ENST00000540113 IGHV1-58A0A0C4DH39 117 aa8.25□□□□□ -1.09
C11orf54-214ENST00000540113 IL17DQ8TAD2 202 aa8.25□□□□□ -1.09
C11orf54-214ENST00000540113 LITAFQ99732 161 aa8.25□□□□□ -1.09
C11orf54-214ENST00000540113 GTSF1LQ9H1H1 148 aa8.25□□□□□ -1.09
C11orf54-214ENST00000540113 SPANXA1Q9NS26 97 aa8.25□□□□□ -1.09
C11orf54-214ENST00000540113 FASNP49327 2511 aaKnown RBP8.25□□□□□ -1.09
C11orf54-214ENST00000540113 TINCRA0A1B0GVN0 87 aa8.24□□□□□ -1.09
C11orf54-214ENST00000540113 GAGE12JA6NER3 117 aa8.24□□□□□ -1.09
C11orf54-214ENST00000540113 HILS1P60008 231 aa8.24□□□□□ -1.09
C11orf54-214ENST00000540113 GAGE4Q13068 117 aa8.24□□□□□ -1.09
C11orf54-214ENST00000540113 GAGE5Q13069 117 aa8.24□□□□□ -1.09
C11orf54-214ENST00000540113 DGAT2L7PQ6IED9 249 aa8.24□□□□□ -1.09
C11orf54-214ENST00000540113 VSIG2Q96IQ7 327 aa8.24□□□□□ -1.09
C11orf54-214ENST00000540113 GEMIN7Q9H840 131 aaKnown RBP8.24□□□□□ -1.09
C11orf54-214ENST00000540113 TMEM238C9JI98 176 aa8.24□□□□□ -1.09
C11orf54-214ENST00000540113 IGHV3-33P01772 117 aa8.24□□□□□ -1.09
C11orf54-214ENST00000540113 GIG44P09565 113 aaPredicted RBP8.24□□□□□ -1.09
C11orf54-214ENST00000540113 DNAJC30Q96LL9 226 aa8.24□□□□□ -1.09
C11orf54-214ENST00000540113 LY6G6DO95868 133 aa8.23□□□□□ -1.09
C11orf54-214ENST00000540113 Q1RN00 199 aa8.23□□□□□ -1.09
C11orf54-214ENST00000540113 NTM-AS1Q6ZSK4 140 aa8.23□□□□□ -1.09
C11orf54-214ENST00000540113 LOC100131303A0A0U1RQF7 123 aa8.23□□□□□ -1.09
C11orf54-214ENST00000540113 A0A0U1RRA0 63 aa8.23□□□□□ -1.09
C11orf54-214ENST00000540113 ZNF625Q96I27 306 aaPredicted RBP8.23□□□□□ -1.09
C11orf54-214ENST00000540113 GAGE12HA6NDE8 117 aa8.22□□□□□ -1.09
C11orf54-214ENST00000540113 GAGE7O76087 117 aa8.22□□□□□ -1.09
C11orf54-214ENST00000540113 GAGE12FP0CL80 117 aa8.22□□□□□ -1.09
C11orf54-214ENST00000540113 GAGE12GP0CL81 117 aa8.22□□□□□ -1.09
C11orf54-214ENST00000540113 GAGE12IP0CL82 117 aa8.22□□□□□ -1.09
C11orf54-214ENST00000540113 ERG28Q9UKR5 140 aa8.22□□□□□ -1.09
C11orf54-214ENST00000540113 TRAV13-1A0A0B4J241 112 aa8.22□□□□□ -1.09
C11orf54-214ENST00000540113 IGLV1-51P01701 117 aa8.22□□□□□ -1.09
C11orf54-214ENST00000540113 C19orf73Q9NVV2 129 aa8.22□□□□□ -1.09
C11orf54-214ENST00000540113 K7EQD1 137 aa8.21□□□□□ -1.09
C11orf54-214ENST00000540113 SMAGPQ0VAQ4 97 aa8.21□□□□□ -1.09
C11orf54-214ENST00000540113 TMEM101Q96IK0 257 aa8.21□□□□□ -1.09
C11orf54-214ENST00000540113 CRYBA4P53673 196 aa8.21□□□□□ -1.1
C11orf54-214ENST00000540113 KRTAP10-3P60369 221 aa8.21□□□□□ -1.1
C11orf54-214ENST00000540113 FOXI1Q12951 378 aa8.21□□□□□ -1.1
C11orf54-214ENST00000540113 C1QTNF4Q9BXJ3 329 aa8.21□□□□□ -1.1
C11orf54-214ENST00000540113 RPL36AP83881 106 aaKnown RBP8.2□□□□□ -1.1
C11orf54-214ENST00000540113 RPL36ALQ969Q0 106 aaKnown RBP8.2□□□□□ -1.1
C11orf54-214ENST00000540113 CARD19Q96LW7 228 aa8.2□□□□□ -1.1
C11orf54-214ENST00000540113 A0A0B4J2C4 111 aa8.2□□□□□ -1.1
C11orf54-214ENST00000540113 PLAC8L1A1L4L8 177 aa8.2□□□□□ -1.1
C11orf54-214ENST00000540113 LINC00242Q5T6M2 205 aa8.2□□□□□ -1.1
C11orf54-214ENST00000540113 TRGV2A0A075B6R0 118 aa8.19□□□□□ -1.1
C11orf54-214ENST00000540113 C9JAW5 83 aa8.19□□□□□ -1.1
C11orf54-214ENST00000540113 J3QR89 54 aa8.19□□□□□ -1.1
C11orf54-214ENST00000540113 HECTD1Q9ULT8 2610 aa8.19□□□□□ -1.1
C11orf54-214ENST00000540113 LYRM7Q5U5X0 104 aa8.19□□□□□ -1.1
C11orf54-214ENST00000540113 ZFAND6Q6FIF0 208 aa8.19□□□□□ -1.1
C11orf54-214ENST00000540113 TRAV4A0A0B4J268 109 aa8.18□□□□□ -1.1
C11orf54-214ENST00000540113 TRIAP1O43715 76 aa8.18□□□□□ -1.1
C11orf54-214ENST00000540113 MIAQ16674 131 aa8.18□□□□□ -1.1
C11orf54-214ENST00000540113 ANKRD29Q8N6D5 301 aa8.18□□□□□ -1.1
C11orf54-214ENST00000540113 SIGMAR1Q99720 223 aa8.18□□□□□ -1.1
C11orf54-214ENST00000540113 TRBV20-1A0A075B6N2 111 aa8.18□□□□□ -1.1
C11orf54-214ENST00000540113 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.18□□□□□ -1.1
C11orf54-214ENST00000540113 IGKV3OR2-268A0A0C4DH90 116 aa8.18□□□□□ -1.1
C11orf54-214ENST00000540113 FAM110AQ9BQ89 295 aa8.17□□□□□ -1.1
C11orf54-214ENST00000540113 Q9H8V8 135 aa8.17□□□□□ -1.1
C11orf54-214ENST00000540113 HIVEP2P31629 2446 aa8.17□□□□□ -1.1
C11orf54-214ENST00000540113 NBEAL2Q6ZNJ1 2754 aa8.17□□□□□ -1.1
C11orf54-214ENST00000540113 TIRAPP58753 221 aa8.17□□□□□ -1.1
C11orf54-214ENST00000540113 SPANXDQ9BXN6 97 aa8.17□□□□□ -1.1
C11orf54-214ENST00000540113 SPANXCQ9NY87 97 aa8.17□□□□□ -1.1
C11orf54-214ENST00000540113 FN1P02751 2386 aaKnown RBP8.16□□□□□ -1.1
C11orf54-214ENST00000540113 SLC25A20O43772 301 aa8.16□□□□□ -1.1
C11orf54-214ENST00000540113 CMC4P56277 68 aaPredicted RBP8.16□□□□□ -1.1
C11orf54-214ENST00000540113 SBSPONQ8IVN8 264 aa8.16□□□□□ -1.1
C11orf54-214ENST00000540113 CSNK1G2-AS1Q8NCQ2 148 aa8.16□□□□□ -1.1
C11orf54-214ENST00000540113 SPATA25Q9BR10 227 aa8.16□□□□□ -1.1
C11orf54-214ENST00000540113 IGLV5-45A0A087WSX0 123 aa8.15□□□□□ -1.1
C11orf54-214ENST00000540113 TEN1Q86WV5 123 aa8.15□□□□□ -1.1
C11orf54-214ENST00000540113 CDC42SE2Q9NRR3 84 aa8.15□□□□□ -1.1
C11orf54-214ENST00000540113 TRGV4A0A0C4DH28 118 aa8.15□□□□□ -1.1
C11orf54-214ENST00000540113 SMIM1B2RUZ4 78 aa8.15□□□□□ -1.1
C11orf54-214ENST00000540113 DAZ2Q13117 558 aaKnown RBP8.15□□□□□ -1.1
C11orf54-214ENST00000540113 DAZ4Q86SG3 579 aaKnown RBP8.15□□□□□ -1.1
C11orf54-214ENST00000540113 C16orf74Q96GX8 76 aa8.15□□□□□ -1.1
C11orf54-214ENST00000540113 DAZ3Q9NR90 486 aaKnown RBP8.15□□□□□ -1.1
C11orf54-214ENST00000540113 VWFP04275 2813 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms