RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.34□□□□□ -1.23
LEMD3-202ENST00000539442 ZNF25P17030 456 aaPredicted RBP7.34□□□□□ -1.23
LEMD3-202ENST00000539442 PAPPA-AS1Q5QFB9 102 aa7.34□□□□□ -1.23
LEMD3-202ENST00000539442 IFI27L1Q96BM0 104 aa7.34□□□□□ -1.23
LEMD3-202ENST00000539442 CHCHD5Q9BSY4 110 aa7.34□□□□□ -1.23
LEMD3-202ENST00000539442 MAP1LC3CQ9BXW4 147 aa7.34□□□□□ -1.23
LEMD3-202ENST00000539442 UBE2D4Q9Y2X8 147 aa7.34□□□□□ -1.23
LEMD3-202ENST00000539442 TRAV8-6A0A0B4J262 113 aa7.33□□□□□ -1.24
LEMD3-202ENST00000539442 LOC105371267A0A1B0GV96 52 aa7.33□□□□□ -1.24
LEMD3-202ENST00000539442 FGF6P10767 208 aa7.33□□□□□ -1.24
LEMD3-202ENST00000539442 LINC00173Q6ZV60 143 aa7.33□□□□□ -1.24
LEMD3-202ENST00000539442 OR10D4PQ8NGN7 298 aa7.33□□□□□ -1.24
LEMD3-202ENST00000539442 C3orf79P0CE67 100 aa7.32□□□□□ -1.24
LEMD3-202ENST00000539442 MRPS36P82909 103 aaKnown RBP7.32□□□□□ -1.24
LEMD3-202ENST00000539442 ESRGQ1W209 222 aa7.32□□□□□ -1.24
LEMD3-202ENST00000539442 LCE5AQ5TCM9 118 aa7.32□□□□□ -1.24
LEMD3-202ENST00000539442 AMMECR1LQ6DCA0 310 aa7.32□□□□□ -1.24
LEMD3-202ENST00000539442 DGAT2L7PQ6IED9 249 aa7.32□□□□□ -1.24
LEMD3-202ENST00000539442 Q6ZN92 141 aa7.32□□□□□ -1.24
LEMD3-202ENST00000539442 TMEM101Q96IK0 257 aa7.32□□□□□ -1.24
LEMD3-202ENST00000539442 WWC2-AS2Q96NR7 200 aa7.32□□□□□ -1.24
LEMD3-202ENST00000539442 APLNQ9ULZ1 77 aa7.32□□□□□ -1.24
LEMD3-202ENST00000539442 IGLV4-3A0A075B6K6 122 aa7.31□□□□□ -1.24
LEMD3-202ENST00000539442 A0A1B0GUV1 79 aa7.31□□□□□ -1.24
LEMD3-202ENST00000539442 FAM229AH3BQW9 127 aa7.31□□□□□ -1.24
LEMD3-202ENST00000539442 SYS1-DBNDD2H3BUS1 97 aa7.31□□□□□ -1.24
LEMD3-202ENST00000539442 CCL18P55774 89 aa7.31□□□□□ -1.24
LEMD3-202ENST00000539442 KRTDAPP60985 99 aa7.31□□□□□ -1.24
LEMD3-202ENST00000539442 GAGE6Q13070 117 aa7.31□□□□□ -1.24
LEMD3-202ENST00000539442 PET117Q6UWS5 81 aa7.31□□□□□ -1.24
LEMD3-202ENST00000539442 SPATA12Q7Z6I5 190 aa7.31□□□□□ -1.24
LEMD3-202ENST00000539442 OR5A1Q8NGJ0 315 aa7.31□□□□□ -1.24
LEMD3-202ENST00000539442 MUC7Q8TAX7 377 aa7.31□□□□□ -1.24
LEMD3-202ENST00000539442 MRPS16Q9Y3D3 137 aaKnown RBP7.31□□□□□ -1.24
LEMD3-202ENST00000539442 TRAV12-1A0A0B4J245 112 aa7.3□□□□□ -1.24
LEMD3-202ENST00000539442 C20orf202A1L168 122 aa7.3□□□□□ -1.24
LEMD3-202ENST00000539442 PRSS1P07477 247 aa7.3□□□□□ -1.24
LEMD3-202ENST00000539442 AKR1D1P51857 326 aa7.3□□□□□ -1.24
LEMD3-202ENST00000539442 BAALCQ8WXS3 180 aa7.3□□□□□ -1.24
LEMD3-202ENST00000539442 A0A087WX48 190 aa7.29□□□□□ -1.24
LEMD3-202ENST00000539442 TMEM262E9PQX1 116 aa7.29□□□□□ -1.24
LEMD3-202ENST00000539442 RBX1P62877 108 aa7.29□□□□□ -1.24
LEMD3-202ENST00000539442 PMVKQ15126 192 aa7.29□□□□□ -1.24
LEMD3-202ENST00000539442 MPV17L2Q567V2 206 aa7.29□□□□□ -1.24
LEMD3-202ENST00000539442 LGALS9CQ6DKI2 356 aa7.29□□□□□ -1.24
LEMD3-202ENST00000539442 TEX43Q6ZNM6 134 aa7.29□□□□□ -1.24
LEMD3-202ENST00000539442 Q6ZUT4 128 aa7.29□□□□□ -1.24
LEMD3-202ENST00000539442 ZNF664Q8N3J9 261 aa7.29□□□□□ -1.24
LEMD3-202ENST00000539442 AMELXQ99217 191 aa7.29□□□□□ -1.24
LEMD3-202ENST00000539442 UPK3BQ9BT76 320 aa7.29□□□□□ -1.24
LEMD3-202ENST00000539442 VCX2Q9H322 139 aa7.29□□□□□ -1.24
LEMD3-202ENST00000539442 CDC42SE2Q9NRR3 84 aa7.29□□□□□ -1.24
LEMD3-202ENST00000539442 DYNC2H1Q8NCM8 4307 aaKnown RBP7.28□□□□□ -1.24
LEMD3-202ENST00000539442 JOSD1Q15040 202 aaPredicted RBP7.28□□□□□ -1.24
LEMD3-202ENST00000539442 LINC01545Q5VT33 79 aa7.28□□□□□ -1.24
LEMD3-202ENST00000539442 FAM104AQ969W3 186 aa7.28□□□□□ -1.24
LEMD3-202ENST00000539442 OPRPNQ99935 248 aaPredicted RBP7.28□□□□□ -1.24
LEMD3-202ENST00000539442 C2orf88Q9BSF0 95 aa7.28□□□□□ -1.24
LEMD3-202ENST00000539442 LINC00588Q9Y4M8 146 aa7.28□□□□□ -1.24
LEMD3-202ENST00000539442 IGLV4-60A0A075B6I1 120 aa7.27□□□□□ -1.25
LEMD3-202ENST00000539442 PRSS29PA6NIE9 313 aa7.27□□□□□ -1.25
LEMD3-202ENST00000539442 H0Y8G0 127 aa7.27□□□□□ -1.25
LEMD3-202ENST00000539442 ODF1Q14990 250 aa7.27□□□□□ -1.25
LEMD3-202ENST00000539442 LINC01556Q5JQF7 62 aa7.27□□□□□ -1.25
LEMD3-202ENST00000539442 ZFAND6Q6FIF0 208 aa7.27□□□□□ -1.25
LEMD3-202ENST00000539442 WFDC10BQ8IUB3 73 aa7.27□□□□□ -1.25
LEMD3-202ENST00000539442 CST9LQ9H4G1 147 aa7.27□□□□□ -1.25
LEMD3-202ENST00000539442 DNAH7Q8WXX0 4024 aa7.27□□□□□ -1.25
LEMD3-202ENST00000539442 F8VRH5 84 aa7.26□□□□□ -1.25
LEMD3-202ENST00000539442 DNAH10OSP0CZ25 163 aa7.26□□□□□ -1.25
LEMD3-202ENST00000539442 Q8N976 141 aa7.26□□□□□ -1.25
LEMD3-202ENST00000539442 CHTOPQ9Y3Y2 248 aaKnown RBP7.26□□□□□ -1.25
LEMD3-202ENST00000539442 C3orf84H3BNL1 204 aa7.25□□□□□ -1.25
LEMD3-202ENST00000539442 SCGB1D1O95968 90 aa7.25□□□□□ -1.25
LEMD3-202ENST00000539442 ANGP03950 147 aaKnown RBP7.25□□□□□ -1.25
LEMD3-202ENST00000539442 RNASE13Q5GAN3 156 aaKnown RBP7.25□□□□□ -1.25
LEMD3-202ENST00000539442 PYY3Q5JQD4 70 aa7.25□□□□□ -1.25
LEMD3-202ENST00000539442 UBE2DNLQ8IWF7 75 aa7.25□□□□□ -1.25
LEMD3-202ENST00000539442 K7EP13 123 aa7.24□□□□□ -1.25
LEMD3-202ENST00000539442 SIVA1O15304 175 aa7.24□□□□□ -1.25
LEMD3-202ENST00000539442 SMIM6P0DI80 62 aa7.24□□□□□ -1.25
LEMD3-202ENST00000539442 PLNP26678 52 aa7.24□□□□□ -1.25
LEMD3-202ENST00000539442 UBE2D1P51668 147 aa7.24□□□□□ -1.25
LEMD3-202ENST00000539442 SEC11AP67812 179 aa7.24□□□□□ -1.25
LEMD3-202ENST00000539442 ZC2HC1BQ5TFG8 222 aa7.24□□□□□ -1.25
LEMD3-202ENST00000539442 FAM19A3Q7Z5A8 133 aa7.24□□□□□ -1.25
LEMD3-202ENST00000539442 MRPL35Q9NZE8 188 aaKnown RBP7.24□□□□□ -1.25
LEMD3-202ENST00000539442 IGLV4-69A0A075B6H9 119 aa7.23□□□□□ -1.25
LEMD3-202ENST00000539442 CCL25O15444 150 aa7.23□□□□□ -1.25
LEMD3-202ENST00000539442 DPM2O94777 84 aa7.23□□□□□ -1.25
LEMD3-202ENST00000539442 IGHV3-30P01768 117 aa7.23□□□□□ -1.25
LEMD3-202ENST00000539442 IGHV3-33P01772 117 aa7.23□□□□□ -1.25
LEMD3-202ENST00000539442 IGKCP01834 107 aa7.23□□□□□ -1.25
LEMD3-202ENST00000539442 IGLC3P0DOY3 106 aa7.23□□□□□ -1.25
LEMD3-202ENST00000539442 IGHV3-30-3P0DP02 117 aa7.23□□□□□ -1.25
LEMD3-202ENST00000539442 IGHV3-30-5P0DP03 117 aa7.23□□□□□ -1.25
LEMD3-202ENST00000539442 NFE4Q86UQ8 179 aa7.23□□□□□ -1.25
LEMD3-202ENST00000539442 PRR34Q9NV39 138 aa7.23□□□□□ -1.25
LEMD3-202ENST00000539442 TRAV13-1A0A0B4J241 112 aa7.22□□□□□ -1.25
LEMD3-202ENST00000539442 TINCRA0A1B0GVN0 87 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms