RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 GAGE12HA6NDE8 117 aa11.25□□□□□ -0.61
GPN3-202ENST00000537466 PPBPP02775 128 aa11.25□□□□□ -0.61
GPN3-202ENST00000537466 SMIM2Q9BVW6 85 aa11.25□□□□□ -0.61
GPN3-202ENST00000537466 CDC42SE2Q9NRR3 84 aa11.25□□□□□ -0.61
GPN3-202ENST00000537466 TMEM136Q6ZRR5 245 aa11.25□□□□□ -0.61
GPN3-202ENST00000537466 Q6ZSA8 131 aa11.25□□□□□ -0.61
GPN3-202ENST00000537466 ORMDL3Q8N138 153 aa11.25□□□□□ -0.61
GPN3-202ENST00000537466 CHCHD10Q8WYQ3 142 aaPredicted RBP11.25□□□□□ -0.61
GPN3-202ENST00000537466 PHOX2AO14813 284 aa11.24□□□□□ -0.61
GPN3-202ENST00000537466 PRELID3AQ96N28 172 aa11.24□□□□□ -0.61
GPN3-202ENST00000537466 UBE2D4Q9Y2X8 147 aa11.24□□□□□ -0.61
GPN3-202ENST00000537466 SMR3BP02814 79 aaPredicted RBP11.23□□□□□ -0.61
GPN3-202ENST00000537466 ZNF664Q8N3J9 261 aa11.23□□□□□ -0.61
GPN3-202ENST00000537466 IMMP2LQ96T52 175 aa11.23□□□□□ -0.61
GPN3-202ENST00000537466 CTDSP1Q9GZU7 261 aa11.23□□□□□ -0.61
GPN3-202ENST00000537466 FAT1Q14517 4588 aa11.23□□□□□ -0.61
GPN3-202ENST00000537466 LINC00959A0A1B0GUT2 108 aa11.22□□□□□ -0.61
GPN3-202ENST00000537466 TCAPO15273 167 aa11.22□□□□□ -0.61
GPN3-202ENST00000537466 C10orf91Q5T1B1 145 aa11.22□□□□□ -0.61
GPN3-202ENST00000537466 CLRN3Q8NCR9 226 aa11.22□□□□□ -0.61
GPN3-202ENST00000537466 hDV102S1A0JD36 115 aa11.21□□□□□ -0.61
GPN3-202ENST00000537466 RPL39P62891 51 aaKnown RBP11.21□□□□□ -0.61
GPN3-202ENST00000537466 DGAT2L7PQ6IED9 249 aa11.21□□□□□ -0.61
GPN3-202ENST00000537466 C15orf56Q8N910 161 aa11.21□□□□□ -0.61
GPN3-202ENST00000537466 CSDC2Q9Y534 153 aaKnown RBP11.21□□□□□ -0.61
GPN3-202ENST00000537466 FOXI1Q12951 378 aa11.2□□□□□ -0.62
GPN3-202ENST00000537466 RNASE13Q5GAN3 156 aaKnown RBP11.2□□□□□ -0.62
GPN3-202ENST00000537466 CCL25O15444 150 aa11.19□□□□□ -0.62
GPN3-202ENST00000537466 XCL1P47992 114 aa11.19□□□□□ -0.62
GPN3-202ENST00000537466 EPM2AB3EWF7 344 aa11.19□□□□□ -0.62
GPN3-202ENST00000537466 SLPIP03973 132 aa11.19□□□□□ -0.62
GPN3-202ENST00000537466 Q6ZUT4 128 aa11.19□□□□□ -0.62
GPN3-202ENST00000537466 C9orf163Q8N9P6 203 aa11.19□□□□□ -0.62
GPN3-202ENST00000537466 TMEM18Q96B42 140 aa11.19□□□□□ -0.62
GPN3-202ENST00000537466 TIMM21Q9BVV7 248 aa11.19□□□□□ -0.62
GPN3-202ENST00000537466 CARHSP1Q9Y2V2 147 aaKnown RBP11.19□□□□□ -0.62
GPN3-202ENST00000537466 LOC389332A0A1B0GUA5 103 aa11.18□□□□□ -0.62
GPN3-202ENST00000537466 PRSS47A8MTI9 375 aa11.18□□□□□ -0.62
GPN3-202ENST00000537466 SMAGPQ0VAQ4 97 aa11.18□□□□□ -0.62
GPN3-202ENST00000537466 SS18Q15532 418 aa11.18□□□□□ -0.62
GPN3-202ENST00000537466 Q5VSD8 79 aa11.18□□□□□ -0.62
GPN3-202ENST00000537466 LAMTOR2Q9Y2Q5 125 aa11.18□□□□□ -0.62
GPN3-202ENST00000537466 CNBPP62633 177 aaKnown RBP11.17□□□□□ -0.62
GPN3-202ENST00000537466 HIGD2BQ4VC39 106 aa11.17□□□□□ -0.62
GPN3-202ENST00000537466 SCXQ7RTU7 201 aa11.17□□□□□ -0.62
GPN3-202ENST00000537466 FAM104AQ969W3 186 aa11.17□□□□□ -0.62
GPN3-202ENST00000537466 MAP1LC3AQ9H492 121 aa11.17□□□□□ -0.62
GPN3-202ENST00000537466 TRAV9-1A0A075B6T8 112 aa11.16□□□□□ -0.62
GPN3-202ENST00000537466 CFAP161Q6P656 301 aa11.16□□□□□ -0.62
GPN3-202ENST00000537466 RAB5AP20339 215 aa11.15□□□□□ -0.62
GPN3-202ENST00000537466 OPRPNQ99935 248 aaPredicted RBP11.15□□□□□ -0.62
GPN3-202ENST00000537466 AP5S1Q9NUS5 200 aa11.15□□□□□ -0.62
GPN3-202ENST00000537466 VPS13BQ7Z7G8 4022 aa11.14□□□□□ -0.63
GPN3-202ENST00000537466 S100PP25815 95 aa11.14□□□□□ -0.63
GPN3-202ENST00000537466 RHEBQ15382 184 aa11.14□□□□□ -0.63
GPN3-202ENST00000537466 KIAA1644Q3SXP7 199 aa11.14□□□□□ -0.63
GPN3-202ENST00000537466 CD164L2Q6UWJ8 174 aa11.14□□□□□ -0.63
GPN3-202ENST00000537466 CHAC1Q9BUX1 264 aa11.14□□□□□ -0.63
GPN3-202ENST00000537466 RPS10P5Q9NQ39 176 aa11.14□□□□□ -0.63
GPN3-202ENST00000537466 GVQW2A0A096LPI5 108 aaPredicted RBP11.13□□□□□ -0.63
GPN3-202ENST00000537466 TRAV13-1A0A0B4J241 112 aa11.13□□□□□ -0.63
GPN3-202ENST00000537466 Q8N8P6 123 aa11.13□□□□□ -0.63
GPN3-202ENST00000537466 SPANXA1Q9NS26 97 aa11.13□□□□□ -0.63
GPN3-202ENST00000537466 C1orf196B1AJZ1 125 aa11.12□□□□□ -0.63
GPN3-202ENST00000537466 SDIM1Q6ZPB5 146 aa11.12□□□□□ -0.63
GPN3-202ENST00000537466 CIRBP-AS1Q8TBR5 109 aa11.12□□□□□ -0.63
GPN3-202ENST00000537466 PANO1I0J062 215 aa11.12□□□□□ -0.63
GPN3-202ENST00000537466 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.12□□□□□ -0.63
GPN3-202ENST00000537466 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.11□□□□□ -0.63
GPN3-202ENST00000537466 FAM229AH3BQW9 127 aa11.11□□□□□ -0.63
GPN3-202ENST00000537466 MRPS36P82909 103 aaKnown RBP11.11□□□□□ -0.63
GPN3-202ENST00000537466 LINC00526Q96FQ7 95 aa11.11□□□□□ -0.63
GPN3-202ENST00000537466 IGHV1-58A0A0C4DH39 117 aa11.1□□□□□ -0.63
GPN3-202ENST00000537466 APOC3P02656 99 aa11.1□□□□□ -0.63
GPN3-202ENST00000537466 IFI27P40305 119 aaPredicted RBP11.1□□□□□ -0.63
GPN3-202ENST00000537466 GNB1LQ9BYB4 327 aa11.1□□□□□ -0.63
GPN3-202ENST00000537466 IGHV3-64A0A075B6Q5 118 aa11.09□□□□□ -0.63
GPN3-202ENST00000537466 LINC00528Q8N1L1 170 aa11.09□□□□□ -0.63
GPN3-202ENST00000537466 PYGO1Q9Y3Y4 419 aa11.09□□□□□ -0.63
GPN3-202ENST00000537466 NXT2Q9NPJ8 142 aaKnown RBP11.08□□□□□ -0.64
GPN3-202ENST00000537466 SRRM2Q9UQ35 2752 aaKnown RBP11.08□□□□□ -0.64
GPN3-202ENST00000537466 IGLV4-3A0A075B6K6 122 aa11.07□□□□□ -0.64
GPN3-202ENST00000537466 COX7A2LO14548 114 aa11.07□□□□□ -0.64
GPN3-202ENST00000537466 C2orf66Q6UXQ4 117 aa11.07□□□□□ -0.64
GPN3-202ENST00000537466 C5orf38Q86SI9 138 aa11.07□□□□□ -0.64
GPN3-202ENST00000537466 IFITM10A6NMD0 228 aa11.06□□□□□ -0.64
GPN3-202ENST00000537466 ORMDL2Q53FV1 153 aa11.06□□□□□ -0.64
GPN3-202ENST00000537466 CYSLTR1Q9Y271 337 aa11.06□□□□□ -0.64
GPN3-202ENST00000537466 TGIF2-C20orf24A0A0A6YYL0 155 aa11.06□□□□□ -0.64
GPN3-202ENST00000537466 K7EMI3 77 aa11.06□□□□□ -0.64
GPN3-202ENST00000537466 CHTF8P0CG12 524 aa11.06□□□□□ -0.64
GPN3-202ENST00000537466 MALP21145 153 aa11.06□□□□□ -0.64
GPN3-202ENST00000537466 COX19Q49B96 90 aa11.06□□□□□ -0.64
GPN3-202ENST00000537466 ALKBH7Q9BT30 221 aaPredicted RBP11.06□□□□□ -0.64
GPN3-202ENST00000537466 MRPL18Q9H0U6 180 aaKnown RBP11.06□□□□□ -0.64
GPN3-202ENST00000537466 INAFM2P0DMQ5 153 aa11.05□□□□□ -0.64
GPN3-202ENST00000537466 COX6A2Q02221 97 aa11.05□□□□□ -0.64
GPN3-202ENST00000537466 CIRBPQ14011 172 aaKnown RBP11.05□□□□□ -0.64
GPN3-202ENST00000537466 NDUFA5Q16718 116 aa11.05□□□□□ -0.64
GPN3-202ENST00000537466 SVBPQ8N300 66 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms