RNA–Protein interactions for RNA: ENST00000535731.1

LRP6-202, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-202ENST00000535731 MPV17L2Q567V2 206 aa12.33□□□□□ -0.44
LRP6-202ENST00000535731 CBLN2Q8IUK8 224 aa12.33□□□□□ -0.44
LRP6-202ENST00000535731 NEXN-AS1Q8NBZ9 246 aa12.33□□□□□ -0.44
LRP6-202ENST00000535731 C7orf33Q8WU49 177 aa12.33□□□□□ -0.44
LRP6-202ENST00000535731 TGIF2-C20orf24A0A0A6YYL0 155 aa12.32□□□□□ -0.44
LRP6-202ENST00000535731 A0A0J9YXV3 536 aa12.32□□□□□ -0.44
LRP6-202ENST00000535731 PHOX2AO14813 284 aa12.32□□□□□ -0.44
LRP6-202ENST00000535731 CNBPP62633 177 aaKnown RBP12.32□□□□□ -0.44
LRP6-202ENST00000535731 COX19Q49B96 90 aa12.32□□□□□ -0.44
LRP6-202ENST00000535731 NIT2Q9NQR4 276 aa12.32□□□□□ -0.44
LRP6-202ENST00000535731 TRBV24-1A0A075B6N3 115 aa12.31□□□□□ -0.44
LRP6-202ENST00000535731 PKIAP61925 76 aa12.31□□□□□ -0.44
LRP6-202ENST00000535731 KRTAP26-1Q6PEX3 210 aa12.31□□□□□ -0.44
LRP6-202ENST00000535731 TMEM136Q6ZRR5 245 aa12.31□□□□□ -0.44
LRP6-202ENST00000535731 IGHV3-64A0A075B6Q5 118 aa12.3□□□□□ -0.44
LRP6-202ENST00000535731 NCR2O95944 276 aa12.3□□□□□ -0.44
LRP6-202ENST00000535731 CKS2P33552 79 aa12.3□□□□□ -0.44
LRP6-202ENST00000535731 RPL39LQ96EH5 51 aaKnown RBP12.3□□□□□ -0.44
LRP6-202ENST00000535731 GNB1LQ9BYB4 327 aa12.3□□□□□ -0.44
LRP6-202ENST00000535731 PRR34Q9NV39 138 aa12.3□□□□□ -0.44
LRP6-202ENST00000535731 PLAC8Q9NZF1 115 aa12.3□□□□□ -0.44
LRP6-202ENST00000535731 SMKR1H3BMG3 65 aa12.29□□□□□ -0.44
LRP6-202ENST00000535731 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.29□□□□□ -0.44
LRP6-202ENST00000535731 SPACA4Q8TDM5 124 aa12.29□□□□□ -0.44
LRP6-202ENST00000535731 YPEL4Q96NS1 127 aa12.29□□□□□ -0.44
LRP6-202ENST00000535731 PPP1R17O96001 155 aa12.28□□□□□ -0.44
LRP6-202ENST00000535731 PPBPP02775 128 aa12.28□□□□□ -0.44
LRP6-202ENST00000535731 MT-ND6P03923 174 aa12.28□□□□□ -0.44
LRP6-202ENST00000535731 CHTF8P0CG12 524 aa12.28□□□□□ -0.44
LRP6-202ENST00000535731 CHCHD5Q9BSY4 110 aa12.28□□□□□ -0.44
LRP6-202ENST00000535731 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.27□□□□□ -0.45
LRP6-202ENST00000535731 hDV102S1A0JD36 115 aa12.27□□□□□ -0.45
LRP6-202ENST00000535731 D6R8Y8 96 aa12.27□□□□□ -0.45
LRP6-202ENST00000535731 RPS10P46783 165 aaKnown RBP12.27□□□□□ -0.45
LRP6-202ENST00000535731 ORMDL3Q8N138 153 aa12.27□□□□□ -0.45
LRP6-202ENST00000535731 TRBV6-5A0A0K0K1A5 114 aa12.26□□□□□ -0.45
LRP6-202ENST00000535731 SCO1O75880 301 aa12.26□□□□□ -0.45
LRP6-202ENST00000535731 APCSP02743 223 aa12.26□□□□□ -0.45
LRP6-202ENST00000535731 LINC00269Q8N2A0 174 aa12.26□□□□□ -0.45
LRP6-202ENST00000535731 NRACQ8N912 160 aa12.26□□□□□ -0.45
LRP6-202ENST00000535731 ST20Q9HBF5 79 aa12.26□□□□□ -0.45
LRP6-202ENST00000535731 AP5S1Q9NUS5 200 aa12.26□□□□□ -0.45
LRP6-202ENST00000535731 REG3GQ6UW15 175 aa12.25□□□□□ -0.45
LRP6-202ENST00000535731 SDHAF1A6NFY7 115 aa12.24□□□□□ -0.45
LRP6-202ENST00000535731 SLPIP03973 132 aa12.24□□□□□ -0.45
LRP6-202ENST00000535731 CLPSL2Q6UWE3 100 aa12.24□□□□□ -0.45
LRP6-202ENST00000535731 PRELID3AQ96N28 172 aa12.24□□□□□ -0.45
LRP6-202ENST00000535731 KRTAP9-2Q9BYQ4 174 aa12.24□□□□□ -0.45
LRP6-202ENST00000535731 MRPL18Q9H0U6 180 aaKnown RBP12.24□□□□□ -0.45
LRP6-202ENST00000535731 TNFRSF6BO95407 300 aa12.23□□□□□ -0.45
LRP6-202ENST00000535731 SUMO2P61956 95 aaKnown RBP12.23□□□□□ -0.45
LRP6-202ENST00000535731 RBX1P62877 108 aa12.23□□□□□ -0.45
LRP6-202ENST00000535731 PRR3P79522 188 aaKnown RBP12.23□□□□□ -0.45
LRP6-202ENST00000535731 TRAPPC1Q9Y5R8 145 aa12.23□□□□□ -0.45
LRP6-202ENST00000535731 NPYP01303 97 aa12.22□□□□□ -0.45
LRP6-202ENST00000535731 FABP9Q0Z7S8 132 aa12.22□□□□□ -0.45
LRP6-202ENST00000535731 KIAA1644Q3SXP7 199 aa12.22□□□□□ -0.45
LRP6-202ENST00000535731 TMEM97Q5BJF2 176 aa12.22□□□□□ -0.45
LRP6-202ENST00000535731 SPINK6Q6UWN8 80 aa12.22□□□□□ -0.45
LRP6-202ENST00000535731 C20orf78Q9BR46 151 aa12.22□□□□□ -0.45
LRP6-202ENST00000535731 LAMTOR2Q9Y2Q5 125 aa12.22□□□□□ -0.45
LRP6-202ENST00000535731 I3L3M4 83 aa12.2□□□□□ -0.46
LRP6-202ENST00000535731 PMCHP20382 165 aa12.2□□□□□ -0.46
LRP6-202ENST00000535731 POLR2KP53803 58 aaKnown RBP12.2□□□□□ -0.46
LRP6-202ENST00000535731 COTL1Q14019 142 aa12.2□□□□□ -0.46
LRP6-202ENST00000535731 NTM-AS1Q6ZSK4 140 aa12.2□□□□□ -0.46
LRP6-202ENST00000535731 IGLV10-54A0A075B6I4 117 aa12.19□□□□□ -0.46
LRP6-202ENST00000535731 COLCA2A8K830 154 aa12.19□□□□□ -0.46
LRP6-202ENST00000535731 VCYO14598 125 aa12.19□□□□□ -0.46
LRP6-202ENST00000535731 GAGE6Q13070 117 aa12.19□□□□□ -0.46
LRP6-202ENST00000535731 TRAV8-4A0A0B4J246 113 aa12.18□□□□□ -0.46
LRP6-202ENST00000535731 TRBV27A0A0K0K1C4 114 aa12.18□□□□□ -0.46
LRP6-202ENST00000535731 REG3AQ06141 175 aa12.18□□□□□ -0.46
LRP6-202ENST00000535731 SMIM2Q9BVW6 85 aa12.18□□□□□ -0.46
LRP6-202ENST00000535731 MAP1LC3AQ9H492 121 aa12.18□□□□□ -0.46
LRP6-202ENST00000535731 TRBV25-1A0A075B6N4 114 aa12.17□□□□□ -0.46
LRP6-202ENST00000535731 RPL32P62910 135 aaKnown RBP12.17□□□□□ -0.46
LRP6-202ENST00000535731 MAJINQ3KP22 176 aa12.17□□□□□ -0.46
LRP6-202ENST00000535731 ALKBH7Q9BT30 221 aaPredicted RBP12.17□□□□□ -0.46
LRP6-202ENST00000535731 IGHV1-24A0A0C4DH33 117 aa12.16□□□□□ -0.46
LRP6-202ENST00000535731 RAB5AP20339 215 aa12.16□□□□□ -0.46
LRP6-202ENST00000535731 AMTP48728 403 aa12.16□□□□□ -0.46
LRP6-202ENST00000535731 COX6A2Q02221 97 aa12.16□□□□□ -0.46
LRP6-202ENST00000535731 KIR2DL4Q99706 377 aa12.16□□□□□ -0.46
LRP6-202ENST00000535731 LPAP08519 4548 aa12.15□□□□□ -0.46
LRP6-202ENST00000535731 LOC389332A0A1B0GUA5 103 aa12.15□□□□□ -0.46
LRP6-202ENST00000535731 TSHBP01222 138 aa12.15□□□□□ -0.46
LRP6-202ENST00000535731 FCER1GP30273 86 aa12.15□□□□□ -0.46
LRP6-202ENST00000535731 SRSF9Q13242 221 aaKnown RBP eCLIP12.15□□□□□ -0.46
LRP6-202ENST00000535731 IQCJQ1A5X6 159 aa12.15□□□□□ -0.46
LRP6-202ENST00000535731 PRSS47A8MTI9 375 aa12.14□□□□□ -0.47
LRP6-202ENST00000535731 STPG4Q8N801 248 aa12.14□□□□□ -0.47
LRP6-202ENST00000535731 TMEM243Q9BU79 118 aa12.14□□□□□ -0.47
LRP6-202ENST00000535731 PRSS3P2Q8NHM4 247 aa12.13□□□□□ -0.47
LRP6-202ENST00000535731 IGKV2-24A0A0C4DH68 120 aa12.12□□□□□ -0.47
LRP6-202ENST00000535731 TCAPO15273 167 aa12.12□□□□□ -0.47
LRP6-202ENST00000535731 TRGC2P03986 189 aa12.12□□□□□ -0.47
LRP6-202ENST00000535731 Q8N8P6 123 aa12.12□□□□□ -0.47
LRP6-202ENST00000535731 UBE2L6O14933 153 aa12.11□□□□□ -0.47
LRP6-202ENST00000535731 CFAP161Q6P656 301 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms