RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 NTF3P20783 257 aa8.08□□□□□ -1.12
CAPRIN1-213ENST00000533562 SUMO4Q6EEV6 95 aa8.08□□□□□ -1.12
CAPRIN1-213ENST00000533562 DGAT2L7PQ6IED9 249 aa8.08□□□□□ -1.12
CAPRIN1-213ENST00000533562 WDR73Q6P4I2 378 aa8.08□□□□□ -1.12
CAPRIN1-213ENST00000533562 RASL11AQ6T310 242 aa8.08□□□□□ -1.12
CAPRIN1-213ENST00000533562 LYZL1Q6UWQ5 148 aa8.08□□□□□ -1.12
CAPRIN1-213ENST00000533562 SMIM15Q7Z3B0 74 aa8.08□□□□□ -1.12
CAPRIN1-213ENST00000533562 CIRBP-AS1Q8TBR5 109 aa8.08□□□□□ -1.12
CAPRIN1-213ENST00000533562 IMMP2LQ96T52 175 aa8.08□□□□□ -1.12
CAPRIN1-213ENST00000533562 PRO1933Q9H354 126 aa8.08□□□□□ -1.12
CAPRIN1-213ENST00000533562 ZNF664Q8N3J9 261 aa8.07□□□□□ -1.12
CAPRIN1-213ENST00000533562 DPH3P1Q9H4G8 78 aa8.07□□□□□ -1.12
CAPRIN1-213ENST00000533562 TRBV20OR9-2A0A075B6H5 130 aa8.06□□□□□ -1.12
CAPRIN1-213ENST00000533562 TRAV8-4A0A0B4J246 113 aa8.06□□□□□ -1.12
CAPRIN1-213ENST00000533562 A0A1B0GUV1 79 aa8.06□□□□□ -1.12
CAPRIN1-213ENST00000533562 TRGC2P03986 189 aa8.06□□□□□ -1.12
CAPRIN1-213ENST00000533562 REG3AQ06141 175 aa8.06□□□□□ -1.12
CAPRIN1-213ENST00000533562 TWIST1Q15672 202 aa8.06□□□□□ -1.12
CAPRIN1-213ENST00000533562 COL5A1-AS1Q5SY13 56 aa8.06□□□□□ -1.12
CAPRIN1-213ENST00000533562 CLPSL2Q6UWE3 100 aa8.06□□□□□ -1.12
CAPRIN1-213ENST00000533562 NUDT10Q8NFP7 164 aa8.06□□□□□ -1.12
CAPRIN1-213ENST00000533562 NUDT11Q96G61 164 aa8.06□□□□□ -1.12
CAPRIN1-213ENST00000533562 TMEM243Q9BU79 118 aa8.06□□□□□ -1.12
CAPRIN1-213ENST00000533562 CHTOPQ9Y3Y2 248 aaKnown RBP8.06□□□□□ -1.12
CAPRIN1-213ENST00000533562 PRSS1P07477 247 aa8.05□□□□□ -1.12
CAPRIN1-213ENST00000533562 SRP19P09132 144 aaKnown RBP8.05□□□□□ -1.12
CAPRIN1-213ENST00000533562 PET117Q6UWS5 81 aa8.05□□□□□ -1.12
CAPRIN1-213ENST00000533562 PGLYRP4Q96LB8 373 aa8.05□□□□□ -1.12
CAPRIN1-213ENST00000533562 SNHG12Q9BXW3 62 aa8.05□□□□□ -1.12
CAPRIN1-213ENST00000533562 KRTAP29-1A8MX34 341 aaPredicted RBP8.04□□□□□ -1.12
CAPRIN1-213ENST00000533562 UBE2L6O14933 153 aa8.04□□□□□ -1.12
CAPRIN1-213ENST00000533562 KRTAP26-1Q6PEX3 210 aa8.04□□□□□ -1.12
CAPRIN1-213ENST00000533562 C9orf163Q8N9P6 203 aa8.04□□□□□ -1.12
CAPRIN1-213ENST00000533562 CNFNQ9BYD5 112 aa8.04□□□□□ -1.12
CAPRIN1-213ENST00000533562 MRPL18Q9H0U6 180 aaKnown RBP8.04□□□□□ -1.12
CAPRIN1-213ENST00000533562 IGLV10-54A0A075B6I4 117 aa8.03□□□□□ -1.12
CAPRIN1-213ENST00000533562 G0S2P27469 103 aa8.03□□□□□ -1.12
CAPRIN1-213ENST00000533562 CTRLP40313 264 aa8.03□□□□□ -1.12
CAPRIN1-213ENST00000533562 C20orf203Q8NBC4 194 aa8.03□□□□□ -1.12
CAPRIN1-213ENST00000533562 OCC1Q8TAD7 63 aa8.03□□□□□ -1.12
CAPRIN1-213ENST00000533562 ORAOV1Q8WV07 137 aa8.03□□□□□ -1.12
CAPRIN1-213ENST00000533562 MIEN1Q9BRT3 115 aa8.03□□□□□ -1.12
CAPRIN1-213ENST00000533562 RNASE7Q9H1E1 156 aaKnown RBP8.03□□□□□ -1.12
CAPRIN1-213ENST00000533562 RPP21Q9H633 154 aaKnown RBP8.03□□□□□ -1.12
CAPRIN1-213ENST00000533562 HSBP1L1C9JCN9 74 aa8.02□□□□□ -1.13
CAPRIN1-213ENST00000533562 AMTP48728 403 aa8.02□□□□□ -1.13
CAPRIN1-213ENST00000533562 IGLV4-60A0A075B6I1 120 aa8.01□□□□□ -1.13
CAPRIN1-213ENST00000533562 hDV102S1A0JD36 115 aa8.01□□□□□ -1.13
CAPRIN1-213ENST00000533562 C20orf202A1L168 122 aa8.01□□□□□ -1.13
CAPRIN1-213ENST00000533562 K7EN84 100 aa8.01□□□□□ -1.13
CAPRIN1-213ENST00000533562 TGIF2-C20orf24A0A0A6YYL0 155 aa8□□□□□ -1.13
CAPRIN1-213ENST00000533562 TMEM250H0YL14 139 aa8□□□□□ -1.13
CAPRIN1-213ENST00000533562 PPBPP02775 128 aa8□□□□□ -1.13
CAPRIN1-213ENST00000533562 CNBPP62633 177 aaKnown RBP8□□□□□ -1.13
CAPRIN1-213ENST00000533562 SDIM1Q6ZPB5 146 aa8□□□□□ -1.13
CAPRIN1-213ENST00000533562 GATD1Q8NB37 220 aa8□□□□□ -1.13
CAPRIN1-213ENST00000533562 AP5S1Q9NUS5 200 aa8□□□□□ -1.13
CAPRIN1-213ENST00000533562 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.99□□□□□ -1.13
CAPRIN1-213ENST00000533562 A8MWL6 223 aa7.99□□□□□ -1.13
CAPRIN1-213ENST00000533562 KRTAP10-4P60372 401 aaPredicted RBP7.99□□□□□ -1.13
CAPRIN1-213ENST00000533562 NAT8Q9UHE5 227 aa7.99□□□□□ -1.13
CAPRIN1-213ENST00000533562 TRAV9-1A0A075B6T8 112 aa7.98□□□□□ -1.13
CAPRIN1-213ENST00000533562 TRAV26-2A0A0B4J265 109 aa7.98□□□□□ -1.13
CAPRIN1-213ENST00000533562 NCR2O95944 276 aa7.98□□□□□ -1.13
CAPRIN1-213ENST00000533562 OXTP01178 125 aa7.98□□□□□ -1.13
CAPRIN1-213ENST00000533562 RPL37AP61513 92 aaKnown RBP7.98□□□□□ -1.13
CAPRIN1-213ENST00000533562 PDZD11Q5EBL8 140 aa7.98□□□□□ -1.13
CAPRIN1-213ENST00000533562 AMMECR1LQ6DCA0 310 aa7.98□□□□□ -1.13
CAPRIN1-213ENST00000533562 CFAP161Q6P656 301 aa7.98□□□□□ -1.13
CAPRIN1-213ENST00000533562 GTSF1Q8WW33 167 aa7.98□□□□□ -1.13
CAPRIN1-213ENST00000533562 DPH3Q96FX2 82 aa7.98□□□□□ -1.13
CAPRIN1-213ENST00000533562 GFRA4Q9GZZ7 299 aa7.98□□□□□ -1.13
CAPRIN1-213ENST00000533562 LRP1Q07954 4544 aaKnown RBP7.97□□□□□ -1.13
CAPRIN1-213ENST00000533562 IGHV3-64A0A075B6Q5 118 aa7.97□□□□□ -1.13
CAPRIN1-213ENST00000533562 H7C423 109 aa7.97□□□□□ -1.13
CAPRIN1-213ENST00000533562 SCGB1D1O95968 90 aa7.97□□□□□ -1.13
CAPRIN1-213ENST00000533562 FAM231DQ6ZW35 169 aa7.97□□□□□ -1.13
CAPRIN1-213ENST00000533562 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.97□□□□□ -1.13
CAPRIN1-213ENST00000533562 ZNF727A8MUV8 499 aa7.96□□□□□ -1.14
CAPRIN1-213ENST00000533562 NPSP0C0P6 89 aa7.96□□□□□ -1.14
CAPRIN1-213ENST00000533562 CEBPGP53567 150 aa7.96□□□□□ -1.14
CAPRIN1-213ENST00000533562 FOXA3P55318 350 aaPredicted RBP7.96□□□□□ -1.14
CAPRIN1-213ENST00000533562 ODF1Q14990 250 aa7.96□□□□□ -1.14
CAPRIN1-213ENST00000533562 TEX43Q6ZNM6 134 aa7.96□□□□□ -1.14
CAPRIN1-213ENST00000533562 BORCS7Q96B45 105 aa7.96□□□□□ -1.14
CAPRIN1-213ENST00000533562 RPL39LQ96EH5 51 aaKnown RBP7.96□□□□□ -1.14
CAPRIN1-213ENST00000533562 IGKV3OR2-268A0A0C4DH90 116 aa7.95□□□□□ -1.14
CAPRIN1-213ENST00000533562 GAGE12HA6NDE8 117 aa7.95□□□□□ -1.14
CAPRIN1-213ENST00000533562 SDHAF1A6NFY7 115 aa7.95□□□□□ -1.14
CAPRIN1-213ENST00000533562 APCSP02743 223 aa7.95□□□□□ -1.14
CAPRIN1-213ENST00000533562 ESDP10768 282 aa7.95□□□□□ -1.14
CAPRIN1-213ENST00000533562 PMCHP20382 165 aa7.95□□□□□ -1.14
CAPRIN1-213ENST00000533562 COX19Q49B96 90 aa7.95□□□□□ -1.14
CAPRIN1-213ENST00000533562 CT83Q5H943 113 aa7.95□□□□□ -1.14
CAPRIN1-213ENST00000533562 SERTAD4-AS1Q5TG53 156 aa7.95□□□□□ -1.14
CAPRIN1-213ENST00000533562 RNASEKQ6P5S7 137 aaKnown RBP7.95□□□□□ -1.14
CAPRIN1-213ENST00000533562 VAMP8Q9BV40 100 aa7.95□□□□□ -1.14
CAPRIN1-213ENST00000533562 PANO1I0J062 215 aa7.94□□□□□ -1.14
CAPRIN1-213ENST00000533562 I3L3M4 83 aa7.94□□□□□ -1.14
CAPRIN1-213ENST00000533562 SLPIP03973 132 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms