RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 FAT3Q8TDW7 4589 aa14.75□□□□□ -0.05
PKP3-210ENST00000533249 TRAV26-2A0A0B4J265 109 aa14.75□□□□□ -0.05
PKP3-210ENST00000533249 RBX1P62877 108 aa14.75□□□□□ -0.05
PKP3-210ENST00000533249 HMCN2Q8NDA2 5059 aa14.74□□□□□ -0.05
PKP3-210ENST00000533249 PPBPP02775 128 aa14.74□□□□□ -0.05
PKP3-210ENST00000533249 KIAA1644Q3SXP7 199 aa14.74□□□□□ -0.05
PKP3-210ENST00000533249 TMEM97Q5BJF2 176 aa14.74□□□□□ -0.05
PKP3-210ENST00000533249 LINC00269Q8N2A0 174 aa14.74□□□□□ -0.05
PKP3-210ENST00000533249 D6R8Y8 96 aa14.73□□□□□ -0.05
PKP3-210ENST00000533249 SMKR1H3BMG3 65 aa14.73□□□□□ -0.05
PKP3-210ENST00000533249 NCR2O95944 276 aa14.73□□□□□ -0.05
PKP3-210ENST00000533249 PPP1R17O96001 155 aa14.73□□□□□ -0.05
PKP3-210ENST00000533249 DGAT2L7PQ6IED9 249 aa14.73□□□□□ -0.05
PKP3-210ENST00000533249 ORMDL3Q8N138 153 aa14.73□□□□□ -0.05
PKP3-210ENST00000533249 PRR34Q9NV39 138 aa14.73□□□□□ -0.05
PKP3-210ENST00000533249 C9orf163Q8N9P6 203 aa14.72□□□□□ -0.05
PKP3-210ENST00000533249 TRBV25-1A0A075B6N4 114 aa14.71□□□□□ -0.05
PKP3-210ENST00000533249 M0QY20 66 aa14.71□□□□□ -0.05
PKP3-210ENST00000533249 HNRNPA3P51991 378 aaKnown RBP14.71□□□□□ -0.05
PKP3-210ENST00000533249 KRTAP26-1Q6PEX3 210 aa14.71□□□□□ -0.05
PKP3-210ENST00000533249 PRELID3AQ96N28 172 aa14.71□□□□□ -0.05
PKP3-210ENST00000533249 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.71□□□□□ -0.05
PKP3-210ENST00000533249 TRGC2P03986 189 aa14.7□□□□□ -0.06
PKP3-210ENST00000533249 NIT2Q9NQR4 276 aa14.7□□□□□ -0.06
PKP3-210ENST00000533249 IGLV10-54A0A075B6I4 117 aa14.68□□□□□ -0.06
PKP3-210ENST00000533249 IGHV1-24A0A0C4DH33 117 aa14.68□□□□□ -0.06
PKP3-210ENST00000533249 PANO1I0J062 215 aa14.68□□□□□ -0.06
PKP3-210ENST00000533249 RPL39LQ96EH5 51 aaKnown RBP14.68□□□□□ -0.06
PKP3-210ENST00000533249 ST20Q9HBF5 79 aa14.68□□□□□ -0.06
PKP3-210ENST00000533249 PLA2G2DQ9UNK4 145 aa14.68□□□□□ -0.06
PKP3-210ENST00000533249 IQCJQ1A5X6 159 aa14.67□□□□□ -0.06
PKP3-210ENST00000533249 LAMTOR2Q9Y2Q5 125 aa14.67□□□□□ -0.06
PKP3-210ENST00000533249 PKHD1L1Q86WI1 4243 aa14.66□□□□□ -0.06
PKP3-210ENST00000533249 TNFRSF6BO95407 300 aa14.66□□□□□ -0.06
PKP3-210ENST00000533249 REG3AQ06141 175 aa14.66□□□□□ -0.06
PKP3-210ENST00000533249 SDIM1Q6ZPB5 146 aa14.66□□□□□ -0.06
PKP3-210ENST00000533249 GAS8-AS1O95177 125 aa14.65□□□□□ -0.06
PKP3-210ENST00000533249 MAP1LC3AQ9H492 121 aa14.65□□□□□ -0.06
PKP3-210ENST00000533249 C1orf196B1AJZ1 125 aa14.64□□□□□ -0.07
PKP3-210ENST00000533249 PHOX2AO14813 284 aa14.64□□□□□ -0.07
PKP3-210ENST00000533249 NPYP01303 97 aa14.64□□□□□ -0.07
PKP3-210ENST00000533249 NRACQ8N912 160 aa14.64□□□□□ -0.07
PKP3-210ENST00000533249 ALKBH7Q9BT30 221 aaPredicted RBP14.64□□□□□ -0.07
PKP3-210ENST00000533249 hDV102S1A0JD36 115 aa14.63□□□□□ -0.07
PKP3-210ENST00000533249 C20orf203Q8NBC4 194 aa14.63□□□□□ -0.07
PKP3-210ENST00000533249 C20orf78Q9BR46 151 aa14.63□□□□□ -0.07
PKP3-210ENST00000533249 LOC389332A0A1B0GUA5 103 aa14.62□□□□□ -0.07
PKP3-210ENST00000533249 SUMO2P61956 95 aaKnown RBP14.62□□□□□ -0.07
PKP3-210ENST00000533249 UBR4Q5T4S7 5183 aa14.61□□□□□ -0.07
PKP3-210ENST00000533249 TRBV6-5A0A0K0K1A5 114 aa14.61□□□□□ -0.07
PKP3-210ENST00000533249 SDHAF1A6NFY7 115 aa14.61□□□□□ -0.07
PKP3-210ENST00000533249 PMCHP20382 165 aa14.61□□□□□ -0.07
PKP3-210ENST00000533249 TMEM243Q9BU79 118 aa14.61□□□□□ -0.07
PKP3-210ENST00000533249 IGLV4-60A0A075B6I1 120 aa14.6□□□□□ -0.07
PKP3-210ENST00000533249 VCYO14598 125 aa14.6□□□□□ -0.07
PKP3-210ENST00000533249 CNBPP62633 177 aaKnown RBP14.6□□□□□ -0.07
PKP3-210ENST00000533249 PRSS3P2Q8NHM4 247 aa14.6□□□□□ -0.07
PKP3-210ENST00000533249 TRAV8-4A0A0B4J246 113 aa14.59□□□□□ -0.07
PKP3-210ENST00000533249 DPH3Q96FX2 82 aa14.59□□□□□ -0.07
PKP3-210ENST00000533249 AP5S1Q9NUS5 200 aa14.58□□□□□ -0.08
PKP3-210ENST00000533249 A0A1B0GUV1 79 aa14.57□□□□□ -0.08
PKP3-210ENST00000533249 I3L3M4 83 aa14.57□□□□□ -0.08
PKP3-210ENST00000533249 KIR2DL4Q99706 377 aa14.57□□□□□ -0.08
PKP3-210ENST00000533249 SMIM2Q9BVW6 85 aa14.57□□□□□ -0.08
PKP3-210ENST00000533249 IGHV3-64A0A075B6Q5 118 aa14.56□□□□□ -0.08
PKP3-210ENST00000533249 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.56□□□□□ -0.08
PKP3-210ENST00000533249 CHTF8P0CG12 524 aa14.56□□□□□ -0.08
PKP3-210ENST00000533249 FCER1GP30273 86 aa14.56□□□□□ -0.08
PKP3-210ENST00000533249 RAB5BP61020 215 aa14.56□□□□□ -0.08
PKP3-210ENST00000533249 CIRBPQ14011 172 aaKnown RBP14.56□□□□□ -0.08
PKP3-210ENST00000533249 COTL1Q14019 142 aa14.56□□□□□ -0.08
PKP3-210ENST00000533249 FA2HQ7L5A8 372 aa14.56□□□□□ -0.08
PKP3-210ENST00000533249 BAGE3Q86Y29 109 aa14.56□□□□□ -0.08
PKP3-210ENST00000533249 NXT2Q9NPJ8 142 aaKnown RBP14.56□□□□□ -0.08
PKP3-210ENST00000533249 UBE2L6O14933 153 aa14.55□□□□□ -0.08
PKP3-210ENST00000533249 SLPIP03973 132 aa14.55□□□□□ -0.08
PKP3-210ENST00000533249 POLR2KP53803 58 aaKnown RBP14.55□□□□□ -0.08
PKP3-210ENST00000533249 RPL32P62910 135 aaKnown RBP14.55□□□□□ -0.08
PKP3-210ENST00000533249 Q8N8P6 123 aa14.55□□□□□ -0.08
PKP3-210ENST00000533249 C18orf32Q8TCD1 76 aa14.55□□□□□ -0.08
PKP3-210ENST00000533249 TCAPO15273 167 aa14.54□□□□□ -0.08
PKP3-210ENST00000533249 IFI27P40305 119 aaPredicted RBP14.54□□□□□ -0.08
PKP3-210ENST00000533249 A0A087WYN8 130 aa14.53□□□□□ -0.08
PKP3-210ENST00000533249 TRBV27A0A0K0K1C4 114 aa14.53□□□□□ -0.08
PKP3-210ENST00000533249 PRSS47A8MTI9 375 aa14.53□□□□□ -0.08
PKP3-210ENST00000533249 MT1HL1P0DM35 61 aa14.53□□□□□ -0.08
PKP3-210ENST00000533249 AMTP48728 403 aa14.53□□□□□ -0.08
PKP3-210ENST00000533249 Q6ZRU5 148 aa14.52□□□□□ -0.09
PKP3-210ENST00000533249 IGKV3OR2-268A0A0C4DH90 116 aa14.51□□□□□ -0.09
PKP3-210ENST00000533249 HIST1H2BKO60814 126 aa14.51□□□□□ -0.09
PKP3-210ENST00000533249 HIST1H2BJP06899 126 aa14.51□□□□□ -0.09
PKP3-210ENST00000533249 HIST1H2BOP23527 126 aa14.51□□□□□ -0.09
PKP3-210ENST00000533249 HIST1H2BBP33778 126 aa14.51□□□□□ -0.09
PKP3-210ENST00000533249 HIST1H2BDP58876 126 aa14.51□□□□□ -0.09
PKP3-210ENST00000533249 HIST1H2BCP62807 126 aa14.51□□□□□ -0.09
PKP3-210ENST00000533249 HIST2H2BEQ16778 126 aa14.51□□□□□ -0.09
PKP3-210ENST00000533249 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.51□□□□□ -0.09
PKP3-210ENST00000533249 RNASEKQ6P5S7 137 aaKnown RBP14.51□□□□□ -0.09
PKP3-210ENST00000533249 HIST1H2BHQ93079 126 aa14.51□□□□□ -0.09
PKP3-210ENST00000533249 HIST1H2BNQ99877 126 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms