RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 POLR2KP53803 58 aaKnown RBP11.51□□□□□ -0.57
SMG1-203ENST00000532700 SUMO2P61956 95 aaKnown RBP11.51□□□□□ -0.57
SMG1-203ENST00000532700 NRACQ8N912 160 aa11.51□□□□□ -0.57
SMG1-203ENST00000532700 CLRN3Q8NCR9 226 aa11.51□□□□□ -0.57
SMG1-203ENST00000532700 CHAC1Q9BUX1 264 aa11.51□□□□□ -0.57
SMG1-203ENST00000532700 A0A1B0GUV1 79 aa11.5□□□□□ -0.57
SMG1-203ENST00000532700 C20orf78Q9BR46 151 aa11.5□□□□□ -0.57
SMG1-203ENST00000532700 TRBV24-1A0A075B6N3 115 aa11.49□□□□□ -0.57
SMG1-203ENST00000532700 D6R8Y8 96 aa11.49□□□□□ -0.57
SMG1-203ENST00000532700 H7C423 109 aa11.49□□□□□ -0.57
SMG1-203ENST00000532700 RPS10P5Q9NQ39 176 aa11.49□□□□□ -0.57
SMG1-203ENST00000532700 PHOX2AO14813 284 aa11.48□□□□□ -0.57
SMG1-203ENST00000532700 TNFRSF6BO95407 300 aa11.48□□□□□ -0.57
SMG1-203ENST00000532700 APOC3P02656 99 aa11.48□□□□□ -0.57
SMG1-203ENST00000532700 TMEM136Q6ZRR5 245 aa11.48□□□□□ -0.57
SMG1-203ENST00000532700 ORMDL3Q8N138 153 aa11.48□□□□□ -0.57
SMG1-203ENST00000532700 KIR2DL4Q99706 377 aa11.48□□□□□ -0.57
SMG1-203ENST00000532700 DMBT1Q9UGM3 2413 aaPredicted RBP11.48□□□□□ -0.57
SMG1-203ENST00000532700 TSHBP01222 138 aa11.47□□□□□ -0.57
SMG1-203ENST00000532700 FCER1GP30273 86 aa11.47□□□□□ -0.57
SMG1-203ENST00000532700 RPL32P62910 135 aaKnown RBP11.47□□□□□ -0.57
SMG1-203ENST00000532700 AMMECR1LQ6DCA0 310 aa11.47□□□□□ -0.57
SMG1-203ENST00000532700 SVBPQ8N300 66 aa11.47□□□□□ -0.57
SMG1-203ENST00000532700 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.47□□□□□ -0.57
SMG1-203ENST00000532700 TCAPO15273 167 aa11.46□□□□□ -0.57
SMG1-203ENST00000532700 SNAPINO95295 136 aa11.46□□□□□ -0.57
SMG1-203ENST00000532700 SLPIP03973 132 aa11.46□□□□□ -0.57
SMG1-203ENST00000532700 PRELID3AQ96N28 172 aa11.46□□□□□ -0.57
SMG1-203ENST00000532700 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.45□□□□□ -0.58
SMG1-203ENST00000532700 IGKV2-29A2NJV5 120 aaPredicted RBP11.45□□□□□ -0.58
SMG1-203ENST00000532700 C14orf177Q52M58 125 aa11.45□□□□□ -0.58
SMG1-203ENST00000532700 LAMTOR2Q9Y2Q5 125 aa11.45□□□□□ -0.58
SMG1-203ENST00000532700 NPYP01303 97 aa11.44□□□□□ -0.58
SMG1-203ENST00000532700 ESDP10768 282 aa11.44□□□□□ -0.58
SMG1-203ENST00000532700 ZNF25P17030 456 aaPredicted RBP11.44□□□□□ -0.58
SMG1-203ENST00000532700 RNASEKQ6P5S7 137 aaKnown RBP11.44□□□□□ -0.58
SMG1-203ENST00000532700 C9orf163Q8N9P6 203 aa11.44□□□□□ -0.58
SMG1-203ENST00000532700 PLA2G1BP04054 148 aaKnown RBP11.43□□□□□ -0.58
SMG1-203ENST00000532700 FGF6P10767 208 aa11.43□□□□□ -0.58
SMG1-203ENST00000532700 SMAGPQ0VAQ4 97 aa11.43□□□□□ -0.58
SMG1-203ENST00000532700 COX19Q49B96 90 aa11.43□□□□□ -0.58
SMG1-203ENST00000532700 TMEM101Q96IK0 257 aa11.43□□□□□ -0.58
SMG1-203ENST00000532700 SMIM2Q9BVW6 85 aa11.43□□□□□ -0.58
SMG1-203ENST00000532700 IGKV3OR2-268A0A0C4DH90 116 aa11.42□□□□□ -0.58
SMG1-203ENST00000532700 C15orf56Q8N910 161 aa11.42□□□□□ -0.58
SMG1-203ENST00000532700 LRP1Q07954 4544 aaKnown RBP11.41□□□□□ -0.58
SMG1-203ENST00000532700 TRAV8-4A0A0B4J246 113 aa11.41□□□□□ -0.58
SMG1-203ENST00000532700 HNRNPA3P51991 378 aaKnown RBP11.41□□□□□ -0.58
SMG1-203ENST00000532700 SDIM1Q6ZPB5 146 aa11.41□□□□□ -0.58
SMG1-203ENST00000532700 TMEM18Q96B42 140 aa11.41□□□□□ -0.58
SMG1-203ENST00000532700 hDV102S1A0JD36 115 aa11.4□□□□□ -0.58
SMG1-203ENST00000532700 GAGE12HA6NDE8 117 aa11.4□□□□□ -0.58
SMG1-203ENST00000532700 DGAT2L7PQ6IED9 249 aa11.4□□□□□ -0.58
SMG1-203ENST00000532700 OR5A1Q8NGJ0 315 aa11.4□□□□□ -0.58
SMG1-203ENST00000532700 GNB1LQ9BYB4 327 aa11.4□□□□□ -0.58
SMG1-203ENST00000532700 MAP1LC3AQ9H492 121 aa11.4□□□□□ -0.58
SMG1-203ENST00000532700 PKHD1L1Q86WI1 4243 aa11.4□□□□□ -0.58
SMG1-203ENST00000532700 PRSS47A8MTI9 375 aa11.39□□□□□ -0.59
SMG1-203ENST00000532700 RAB5AP20339 215 aa11.39□□□□□ -0.59
SMG1-203ENST00000532700 MRPL52Q86TS9 123 aaKnown RBP11.39□□□□□ -0.59
SMG1-203ENST00000532700 MT-ND6P03923 174 aa11.38□□□□□ -0.59
SMG1-203ENST00000532700 CHTF8P0CG12 524 aa11.38□□□□□ -0.59
SMG1-203ENST00000532700 CNBPP62633 177 aaKnown RBP11.38□□□□□ -0.59
SMG1-203ENST00000532700 SLC7A5P1Q8MH63 180 aa11.38□□□□□ -0.59
SMG1-203ENST00000532700 LOC389332A0A1B0GUA5 103 aa11.36□□□□□ -0.59
SMG1-203ENST00000532700 HIGD2BQ4VC39 106 aa11.36□□□□□ -0.59
SMG1-203ENST00000532700 CHCHD10Q8WYQ3 142 aaPredicted RBP11.36□□□□□ -0.59
SMG1-203ENST00000532700 CSDC2Q9Y534 153 aaKnown RBP11.36□□□□□ -0.59
SMG1-203ENST00000532700 CIRBPQ14011 172 aaKnown RBP11.35□□□□□ -0.59
SMG1-203ENST00000532700 ZNF664Q8N3J9 261 aa11.35□□□□□ -0.59
SMG1-203ENST00000532700 Q8N8P6 123 aa11.35□□□□□ -0.59
SMG1-203ENST00000532700 TIMM21Q9BVV7 248 aa11.35□□□□□ -0.59
SMG1-203ENST00000532700 CDC42SE2Q9NRR3 84 aa11.35□□□□□ -0.59
SMG1-203ENST00000532700 FAT3Q8TDW7 4589 aa11.35□□□□□ -0.59
SMG1-203ENST00000532700 KRTAP29-1A8MX34 341 aaPredicted RBP11.34□□□□□ -0.59
SMG1-203ENST00000532700 FOXI1Q12951 378 aa11.34□□□□□ -0.59
SMG1-203ENST00000532700 KIAA1644Q3SXP7 199 aa11.34□□□□□ -0.59
SMG1-203ENST00000532700 NXT2Q9NPJ8 142 aaKnown RBP11.34□□□□□ -0.59
SMG1-203ENST00000532700 UBE2D4Q9Y2X8 147 aa11.34□□□□□ -0.59
SMG1-203ENST00000532700 TGIF2-C20orf24A0A0A6YYL0 155 aa11.33□□□□□ -0.6
SMG1-203ENST00000532700 K7EMI3 77 aa11.33□□□□□ -0.6
SMG1-203ENST00000532700 FABP9Q0Z7S8 132 aa11.33□□□□□ -0.6
SMG1-203ENST00000532700 MRPL18Q9H0U6 180 aaKnown RBP11.33□□□□□ -0.6
SMG1-203ENST00000532700 J3QL48 77 aa11.32□□□□□ -0.6
SMG1-203ENST00000532700 RPL37AP61513 92 aaKnown RBP11.32□□□□□ -0.6
SMG1-203ENST00000532700 ORMDL2Q53FV1 153 aa11.31□□□□□ -0.6
SMG1-203ENST00000532700 LINC00526Q96FQ7 95 aa11.31□□□□□ -0.6
SMG1-203ENST00000532700 SPANXA1Q9NS26 97 aa11.31□□□□□ -0.6
SMG1-203ENST00000532700 TRAPPC1Q9Y5R8 145 aa11.31□□□□□ -0.6
SMG1-203ENST00000532700 G0S2P27469 103 aa11.3□□□□□ -0.6
SMG1-203ENST00000532700 XCL1P47992 114 aa11.3□□□□□ -0.6
SMG1-203ENST00000532700 RPL39P62891 51 aaKnown RBP11.3□□□□□ -0.6
SMG1-203ENST00000532700 SS18Q15532 418 aa11.3□□□□□ -0.6
SMG1-203ENST00000532700 SPACA4Q8TDM5 124 aa11.3□□□□□ -0.6
SMG1-203ENST00000532700 ALKBH7Q9BT30 221 aaPredicted RBP11.3□□□□□ -0.6
SMG1-203ENST00000532700 SMCO4Q9NRQ5 59 aa11.3□□□□□ -0.6
SMG1-203ENST00000532700 IGHV3-64A0A075B6Q5 118 aa11.29□□□□□ -0.6
SMG1-203ENST00000532700 LINC00959A0A1B0GUT2 108 aa11.29□□□□□ -0.6
SMG1-203ENST00000532700 CCL25O15444 150 aa11.29□□□□□ -0.6
SMG1-203ENST00000532700 IFI27P40305 119 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms