RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 TSHBP01222 138 aa12.78□□□□□ -0.36
CHKA-206ENST00000531341 SS18Q15532 418 aa12.78□□□□□ -0.36
CHKA-206ENST00000531341 NUP35Q8NFH5 326 aa12.78□□□□□ -0.36
CHKA-206ENST00000531341 KRTAP9-2Q9BYQ4 174 aa12.78□□□□□ -0.36
CHKA-206ENST00000531341 MED9Q9NWA0 146 aa12.78□□□□□ -0.36
CHKA-206ENST00000531341 TRAV1-1A0A0B4J248 108 aa12.76□□□□□ -0.37
CHKA-206ENST00000531341 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.76□□□□□ -0.37
CHKA-206ENST00000531341 K7EN84 100 aa12.76□□□□□ -0.37
CHKA-206ENST00000531341 MEF2BQ02080 365 aaPredicted RBP12.76□□□□□ -0.37
CHKA-206ENST00000531341 RPP21Q9H633 154 aaKnown RBP12.76□□□□□ -0.37
CHKA-206ENST00000531341 TMEM242Q9NWH2 141 aa12.76□□□□□ -0.37
CHKA-206ENST00000531341 KANTRA0A1W2PQU2 76 aa12.75□□□□□ -0.37
CHKA-206ENST00000531341 KRTAP11-1Q8IUC1 163 aa12.75□□□□□ -0.37
CHKA-206ENST00000531341 TRBV6-5A0A0K0K1A5 114 aa12.74□□□□□ -0.37
CHKA-206ENST00000531341 HMSDA8MTL9 139 aa12.74□□□□□ -0.37
CHKA-206ENST00000531341 PDE6DO43924 150 aa12.74□□□□□ -0.37
CHKA-206ENST00000531341 ISOC2Q96AB3 205 aa12.74□□□□□ -0.37
CHKA-206ENST00000531341 BIN3Q9NQY0 253 aa12.74□□□□□ -0.37
CHKA-206ENST00000531341 APOMO95445 188 aa12.73□□□□□ -0.37
CHKA-206ENST00000531341 EIF5AP63241 154 aaKnown RBP12.73□□□□□ -0.37
CHKA-206ENST00000531341 EIF5AL1Q6IS14 154 aaKnown RBP12.73□□□□□ -0.37
CHKA-206ENST00000531341 MRPL52Q86TS9 123 aaKnown RBP12.73□□□□□ -0.37
CHKA-206ENST00000531341 MRAP2Q96G30 205 aa12.73□□□□□ -0.37
CHKA-206ENST00000531341 CAMK2N2Q96S95 79 aa12.73□□□□□ -0.37
CHKA-206ENST00000531341 OPRPNQ99935 248 aaPredicted RBP12.73□□□□□ -0.37
CHKA-206ENST00000531341 FAT4Q6V0I7 4981 aa12.73□□□□□ -0.37
CHKA-206ENST00000531341 IGLV7-43P04211 117 aa12.72□□□□□ -0.37
CHKA-206ENST00000531341 RPL18AQ02543 176 aaKnown RBP12.72□□□□□ -0.37
CHKA-206ENST00000531341 TEX261Q6UWH6 196 aa12.72□□□□□ -0.37
CHKA-206ENST00000531341 OCC1Q8TAD7 63 aa12.72□□□□□ -0.37
CHKA-206ENST00000531341 MALP21145 153 aa12.71□□□□□ -0.37
CHKA-206ENST00000531341 SMIM15Q7Z3B0 74 aa12.71□□□□□ -0.37
CHKA-206ENST00000531341 COX7A2LO14548 114 aa12.7□□□□□ -0.38
CHKA-206ENST00000531341 RNASE13Q5GAN3 156 aaKnown RBP12.7□□□□□ -0.38
CHKA-206ENST00000531341 POLR2KP53803 58 aaKnown RBP12.69□□□□□ -0.38
CHKA-206ENST00000531341 DIRC1Q969H9 104 aa12.69□□□□□ -0.38
CHKA-206ENST00000531341 ST20Q9HBF5 79 aa12.69□□□□□ -0.38
CHKA-206ENST00000531341 FAM168BA1KXE4 195 aa12.68□□□□□ -0.38
CHKA-206ENST00000531341 H0Y9J4 135 aa12.68□□□□□ -0.38
CHKA-206ENST00000531341 C5orf38Q86SI9 138 aa12.68□□□□□ -0.38
CHKA-206ENST00000531341 C2orf48Q96LS8 159 aa12.68□□□□□ -0.38
CHKA-206ENST00000531341 C1orf196B1AJZ1 125 aa12.67□□□□□ -0.38
CHKA-206ENST00000531341 KRTAP1-4P0C5Y4 121 aa12.67□□□□□ -0.38
CHKA-206ENST00000531341 PRR4Q16378 134 aa12.67□□□□□ -0.38
CHKA-206ENST00000531341 C7orf77A4D0Y5 90 aa12.66□□□□□ -0.38
CHKA-206ENST00000531341 A0A087WZ39 114 aa12.65□□□□□ -0.38
CHKA-206ENST00000531341 TRBV27A0A0K0K1C4 114 aa12.65□□□□□ -0.38
CHKA-206ENST00000531341 TRAV13-1A0A0B4J241 112 aa12.64□□□□□ -0.39
CHKA-206ENST00000531341 TEX46H3BTG2 121 aa12.64□□□□□ -0.39
CHKA-206ENST00000531341 UBE2D4Q9Y2X8 147 aa12.64□□□□□ -0.39
CHKA-206ENST00000531341 GATCO43716 136 aaKnown RBP12.63□□□□□ -0.39
CHKA-206ENST00000531341 SPAG11BQ08648 103 aa12.63□□□□□ -0.39
CHKA-206ENST00000531341 RAB4AP20338 218 aa12.62□□□□□ -0.39
CHKA-206ENST00000531341 RNF151Q2KHN1 245 aa12.62□□□□□ -0.39
CHKA-206ENST00000531341 RGS21Q2M5E4 152 aa12.62□□□□□ -0.39
CHKA-206ENST00000531341 KRTAP7-1Q8IUC3 87 aa12.62□□□□□ -0.39
CHKA-206ENST00000531341 IGLV1-50A0A075B6I6 118 aa12.61□□□□□ -0.39
CHKA-206ENST00000531341 SMKR1H3BMG3 65 aa12.61□□□□□ -0.39
CHKA-206ENST00000531341 FAM210AQ96ND0 272 aa12.61□□□□□ -0.39
CHKA-206ENST00000531341 C10orf25Q5T742 122 aa12.6□□□□□ -0.39
CHKA-206ENST00000531341 Q6ZUT4 128 aa12.6□□□□□ -0.39
CHKA-206ENST00000531341 BATF3Q9NR55 127 aa12.6□□□□□ -0.39
CHKA-206ENST00000531341 CSDC2Q9Y534 153 aaKnown RBP12.6□□□□□ -0.39
CHKA-206ENST00000531341 A8MWL6 223 aa12.59□□□□□ -0.39
CHKA-206ENST00000531341 FAM19A5Q7Z5A7 132 aaPredicted RBP12.59□□□□□ -0.39
CHKA-206ENST00000531341 AMN1Q8IY45 258 aa12.59□□□□□ -0.39
CHKA-206ENST00000531341 TMEM191AQ9H0A3 160 aa12.59□□□□□ -0.39
CHKA-206ENST00000531341 LCE2AQ5TA79 106 aaPredicted RBP12.58□□□□□ -0.4
CHKA-206ENST00000531341 FAM231DQ6ZW35 169 aa12.58□□□□□ -0.4
CHKA-206ENST00000531341 MRPL35Q9NZE8 188 aaKnown RBP12.58□□□□□ -0.4
CHKA-206ENST00000531341 VCYO14598 125 aa12.57□□□□□ -0.4
CHKA-206ENST00000531341 FCER1GP30273 86 aa12.57□□□□□ -0.4
CHKA-206ENST00000531341 OR10D4PQ8NGN7 298 aa12.56□□□□□ -0.4
CHKA-206ENST00000531341 FAM104AQ969W3 186 aa12.56□□□□□ -0.4
CHKA-206ENST00000531341 MUC17Q685J3 4493 aa12.55□□□□□ -0.4
CHKA-206ENST00000531341 UNQ6190/PRO20217Q6UXQ8 127 aa12.55□□□□□ -0.4
CHKA-206ENST00000531341 NRACQ8N912 160 aa12.55□□□□□ -0.4
CHKA-206ENST00000531341 ORAOV1Q8WV07 137 aa12.55□□□□□ -0.4
CHKA-206ENST00000531341 C6orf48Q9UBA6 75 aa12.55□□□□□ -0.4
CHKA-206ENST00000531341 A0A0U1RQV1 116 aa12.54□□□□□ -0.4
CHKA-206ENST00000531341 A0A1B0GUT8 65 aa12.54□□□□□ -0.4
CHKA-206ENST00000531341 HIGD1CA8MV81 97 aa12.54□□□□□ -0.4
CHKA-206ENST00000531341 UBE2D1P51668 147 aa12.54□□□□□ -0.4
CHKA-206ENST00000531341 GAGE2EQ4V326 116 aa12.54□□□□□ -0.4
CHKA-206ENST00000531341 GAGE2DQ9UEU5 116 aa12.54□□□□□ -0.4
CHKA-206ENST00000531341 TLX1NBP0CAT3 122 aa12.53□□□□□ -0.4
CHKA-206ENST00000531341 CT83Q5H943 113 aa12.53□□□□□ -0.4
CHKA-206ENST00000531341 TSKUQ8WUA8 353 aa12.53□□□□□ -0.4
CHKA-206ENST00000531341 BORCS7Q96B45 105 aa12.53□□□□□ -0.4
CHKA-206ENST00000531341 IMMP2LQ96T52 175 aa12.53□□□□□ -0.4
CHKA-206ENST00000531341 IGHV3OR16-9A0A0B4J2B5 98 aa12.52□□□□□ -0.41
CHKA-206ENST00000531341 SUMO2P61956 95 aaKnown RBP12.52□□□□□ -0.41
CHKA-206ENST00000531341 KRTAP9-6A0A140TA67 174 aa12.51□□□□□ -0.41
CHKA-206ENST00000531341 NDUFA1O15239 70 aa12.51□□□□□ -0.41
CHKA-206ENST00000531341 TAGLN2P37802 199 aaKnown RBP12.51□□□□□ -0.41
CHKA-206ENST00000531341 M0QXV9 152 aa12.5□□□□□ -0.41
CHKA-206ENST00000531341 TSPAN13O95857 204 aa12.5□□□□□ -0.41
CHKA-206ENST00000531341 RPL39P62891 51 aaKnown RBP12.5□□□□□ -0.41
CHKA-206ENST00000531341 TIMM21Q9BVV7 248 aa12.5□□□□□ -0.41
CHKA-206ENST00000531341 SMDT1Q9H4I9 107 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms