RNA–Protein interactions for RNA: ENST00000527584.5

PUF60-210, Transcript of poly(U) binding splicing factor 60, human

TSL 2

Gene PUF60, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUF60-210	ENST00000527584	PRADC1	Q9BSG0	188 aa		4.98	□□□□□ -1.61
PUF60-210	ENST00000527584	TMEM191A	Q9H0A3	160 aa		4.98	□□□□□ -1.61
PUF60-210	ENST00000527584	CDIP1	Q9H305	208 aa		4.98	□□□□□ -1.61
PUF60-210	ENST00000527584	TMEM242	Q9NWH2	141 aa		4.98	□□□□□ -1.61
PUF60-210	ENST00000527584		A0A1B0GXF2	115 aa		4.97	□□□□□ -1.61
PUF60-210	ENST00000527584	SMKR1	H3BMG3	65 aa		4.97	□□□□□ -1.61
PUF60-210	ENST00000527584		M0QY20	66 aa		4.97	□□□□□ -1.61
PUF60-210	ENST00000527584	RHOH	Q15669	191 aa		4.97	□□□□□ -1.61
PUF60-210	ENST00000527584	TPRXL	Q17RH7	258 aa		4.97	□□□□□ -1.61
PUF60-210	ENST00000527584	NEXN-AS1	Q8NBZ9	246 aa		4.97	□□□□□ -1.61
PUF60-210	ENST00000527584	BTF3L4	Q96K17	158 aa		4.97	□□□□□ -1.61
PUF60-210	ENST00000527584	IMMP2L	Q96T52	175 aa		4.97	□□□□□ -1.61
PUF60-210	ENST00000527584	IGLV1-50	A0A075B6I6	118 aa		4.96	□□□□□ -1.62
PUF60-210	ENST00000527584	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.96	□□□□□ -1.62
PUF60-210	ENST00000527584	NCR2	O95944	276 aa		4.96	□□□□□ -1.62
PUF60-210	ENST00000527584	S100P	P25815	95 aa		4.96	□□□□□ -1.62
PUF60-210	ENST00000527584	HBB	P68871	147 aa		4.96	□□□□□ -1.62
PUF60-210	ENST00000527584	KRTAP6-3	Q3LI67	103 aa		4.96	□□□□□ -1.62
PUF60-210	ENST00000527584	MRPL51	Q4U2R6	128 aa	Known RBP	4.96	□□□□□ -1.62
PUF60-210	ENST00000527584	FAM104B	Q5XKR9	115 aa		4.96	□□□□□ -1.62
PUF60-210	ENST00000527584	KCNIP4	Q6PIL6	250 aa		4.96	□□□□□ -1.62
PUF60-210	ENST00000527584	RASL11A	Q6T310	242 aa		4.96	□□□□□ -1.62
PUF60-210	ENST00000527584	NIT1	Q86X76	327 aa		4.96	□□□□□ -1.62
PUF60-210	ENST00000527584	UBE2W	Q96B02	151 aa		4.96	□□□□□ -1.62
PUF60-210	ENST00000527584	RPL39L	Q96EH5	51 aa	Known RBP	4.96	□□□□□ -1.62
PUF60-210	ENST00000527584	KLK12	Q9UKR0	248 aa		4.96	□□□□□ -1.62
PUF60-210	ENST00000527584	IGHV3-64	A0A075B6Q5	118 aa		4.95	□□□□□ -1.62
PUF60-210	ENST00000527584		A0A1B0GW15	77 aa		4.95	□□□□□ -1.62
PUF60-210	ENST00000527584	SCO1	O75880	301 aa		4.95	□□□□□ -1.62
PUF60-210	ENST00000527584	RPS10	P46783	165 aa	Known RBP	4.95	□□□□□ -1.62
PUF60-210	ENST00000527584	UBE2D3	P61077	147 aa		4.95	□□□□□ -1.62
PUF60-210	ENST00000527584	UBE2D2	P62837	147 aa		4.95	□□□□□ -1.62
PUF60-210	ENST00000527584	RPL36A	P83881	106 aa	Known RBP	4.95	□□□□□ -1.62
PUF60-210	ENST00000527584	ELOB	Q15370	118 aa		4.95	□□□□□ -1.62
PUF60-210	ENST00000527584	TMEM136	Q6ZRR5	245 aa		4.95	□□□□□ -1.62
PUF60-210	ENST00000527584	ATP5L2	Q7Z4Y8	100 aa		4.95	□□□□□ -1.62
PUF60-210	ENST00000527584	CBLN2	Q8IUK8	224 aa		4.95	□□□□□ -1.62
PUF60-210	ENST00000527584	RPL36AL	Q969Q0	106 aa	Known RBP	4.95	□□□□□ -1.62
PUF60-210	ENST00000527584	NIT2	Q9NQR4	276 aa		4.95	□□□□□ -1.62
PUF60-210	ENST00000527584	TRBV7-3	A0A075B6L6	115 aa		4.94	□□□□□ -1.62
PUF60-210	ENST00000527584	TRBV10-1	A0A0K0K1A3	114 aa		4.94	□□□□□ -1.62
PUF60-210	ENST00000527584	SLPI	P03973	132 aa		4.94	□□□□□ -1.62
PUF60-210	ENST00000527584	S100A8	P05109	93 aa		4.94	□□□□□ -1.62
PUF60-210	ENST00000527584	LINC00694	P0DN24	101 aa		4.94	□□□□□ -1.62
PUF60-210	ENST00000527584	CKS2	P33552	79 aa		4.94	□□□□□ -1.62
PUF60-210	ENST00000527584	KIAA1644	Q3SXP7	199 aa		4.94	□□□□□ -1.62
PUF60-210	ENST00000527584	YPEL4	Q96NS1	127 aa		4.94	□□□□□ -1.62
PUF60-210	ENST00000527584	TRAV9-1	A0A075B6T8	112 aa		4.93	□□□□□ -1.62
PUF60-210	ENST00000527584		D6R8Y8	96 aa		4.93	□□□□□ -1.62
PUF60-210	ENST00000527584	ATP6V1G1	O75348	118 aa		4.93	□□□□□ -1.62
PUF60-210	ENST00000527584		Q0VG73	95 aa		4.93	□□□□□ -1.62
PUF60-210	ENST00000527584	ASB16-AS1	Q495Z4	193 aa		4.93	□□□□□ -1.62
PUF60-210	ENST00000527584	NTM-AS1	Q6ZSK4	140 aa		4.93	□□□□□ -1.62
PUF60-210	ENST00000527584	KRTAP19-1	Q8IUB9	90 aa		4.93	□□□□□ -1.62
PUF60-210	ENST00000527584	NRAC	Q8N912	160 aa		4.93	□□□□□ -1.62
PUF60-210	ENST00000527584	MRAP2	Q96G30	205 aa		4.93	□□□□□ -1.62
PUF60-210	ENST00000527584	C1orf43	Q9BWL3	253 aa		4.93	□□□□□ -1.62
PUF60-210	ENST00000527584	TNFRSF6B	O95407	300 aa		4.92	□□□□□ -1.62
PUF60-210	ENST00000527584	NPY	P01303	97 aa		4.92	□□□□□ -1.62
PUF60-210	ENST00000527584	APCS	P02743	223 aa		4.92	□□□□□ -1.62
PUF60-210	ENST00000527584	KRTAP1-4	P0C5Y4	121 aa		4.92	□□□□□ -1.62
PUF60-210	ENST00000527584	KRTAP20-1	Q3LI63	56 aa		4.92	□□□□□ -1.62
PUF60-210	ENST00000527584	ENHO	Q6UWT2	76 aa		4.92	□□□□□ -1.62
PUF60-210	ENST00000527584	STPG4	Q8N801	248 aa		4.92	□□□□□ -1.62
PUF60-210	ENST00000527584	PRELID3A	Q96N28	172 aa		4.92	□□□□□ -1.62
PUF60-210	ENST00000527584	GNB1L	Q9BYB4	327 aa		4.92	□□□□□ -1.62
PUF60-210	ENST00000527584	ST20	Q9HBF5	79 aa		4.92	□□□□□ -1.62
PUF60-210	ENST00000527584	SMCO4	Q9NRQ5	59 aa		4.92	□□□□□ -1.62
PUF60-210	ENST00000527584	TRBV24-1	A0A075B6N3	115 aa		4.91	□□□□□ -1.62
PUF60-210	ENST00000527584	TRBV6-5	A0A0K0K1A5	114 aa		4.91	□□□□□ -1.62
PUF60-210	ENST00000527584	LOC389332	A0A1B0GUA5	103 aa		4.91	□□□□□ -1.62
PUF60-210	ENST00000527584	SDHAF1	A6NFY7	115 aa		4.91	□□□□□ -1.62
PUF60-210	ENST00000527584	PMCH	P20382	165 aa		4.91	□□□□□ -1.62
PUF60-210	ENST00000527584	POLR2K	P53803	58 aa	Known RBP	4.91	□□□□□ -1.62
PUF60-210	ENST00000527584	FABP9	Q0Z7S8	132 aa		4.91	□□□□□ -1.62
PUF60-210	ENST00000527584	KRTAP26-1	Q6PEX3	210 aa		4.91	□□□□□ -1.62
PUF60-210	ENST00000527584	MRPL18	Q9H0U6	180 aa	Known RBP	4.91	□□□□□ -1.62
PUF60-210	ENST00000527584	TRAPPC1	Q9Y5R8	145 aa		4.91	□□□□□ -1.62
PUF60-210	ENST00000527584	TRBV6-8	A0A0A6YYG3	113 aa		4.9	□□□□□ -1.63
PUF60-210	ENST00000527584	COLCA2	A8K830	154 aa		4.9	□□□□□ -1.63
PUF60-210	ENST00000527584	TSPAN13	O95857	204 aa		4.9	□□□□□ -1.63
PUF60-210	ENST00000527584	HLA-DQA1	P01909	254 aa		4.9	□□□□□ -1.63
PUF60-210	ENST00000527584	S100A1	P23297	94 aa		4.9	□□□□□ -1.63
PUF60-210	ENST00000527584	MAJIN	Q3KP22	176 aa		4.9	□□□□□ -1.63
PUF60-210	ENST00000527584	ORMDL3	Q8N138	153 aa		4.9	□□□□□ -1.63
PUF60-210	ENST00000527584	TMEM262	E9PQX1	116 aa		4.89	□□□□□ -1.63
PUF60-210	ENST00000527584		I3L3M4	83 aa		4.89	□□□□□ -1.63
PUF60-210	ENST00000527584	VCY	O14598	125 aa		4.89	□□□□□ -1.63
PUF60-210	ENST00000527584	TSHB	P01222	138 aa		4.89	□□□□□ -1.63
PUF60-210	ENST00000527584	PPBP	P02775	128 aa		4.89	□□□□□ -1.63
PUF60-210	ENST00000527584	SUMO2	P61956	95 aa	Known RBP	4.89	□□□□□ -1.63
PUF60-210	ENST00000527584	COX6A2	Q02221	97 aa		4.89	□□□□□ -1.63
PUF60-210	ENST00000527584	COTL1	Q14019	142 aa		4.89	□□□□□ -1.63
PUF60-210	ENST00000527584	COX19	Q49B96	90 aa		4.89	□□□□□ -1.63
PUF60-210	ENST00000527584	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	4.89	□□□□□ -1.63
PUF60-210	ENST00000527584	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.89	□□□□□ -1.63
PUF60-210	ENST00000527584	CHCHD7	Q9BUK0	85 aa		4.89	□□□□□ -1.63
PUF60-210	ENST00000527584	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.88	□□□□□ -1.63
PUF60-210	ENST00000527584	TRBV27	A0A0K0K1C4	114 aa		4.88	□□□□□ -1.63
PUF60-210	ENST00000527584	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 172.3 ms